zr1394_10_s456_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 64 lines in total Total number of methylation call strings processed: 64 Final Cytosine Methylation Report ================================= Total number of C's analysed: 442 Total methylated C's in CpG context: 33 Total methylated C's in CHG context: 22 Total methylated C's in CHH context: 130 Total C to T conversions in CpG context: 24 Total C to T conversions in CHG context: 23 Total C to T conversions in CHH context: 210 C methylated in CpG context: 57.9% C methylated in CHG context: 48.9% C methylated in CHH context: 38.2%