zr1394_17_s456_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 368 lines in total Total number of methylation call strings processed: 368 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2714 Total methylated C's in CpG context: 117 Total methylated C's in CHG context: 54 Total methylated C's in CHH context: 510 Total C to T conversions in CpG context: 173 Total C to T conversions in CHG context: 309 Total C to T conversions in CHH context: 1551 C methylated in CpG context: 40.3% C methylated in CHG context: 14.9% C methylated in CHH context: 24.7%