Pg_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 273534856 lines in total Total number of methylation call strings processed: 547069712 Final Cytosine Methylation Report ================================= Total number of C's analysed: 5902630221 Total methylated C's in CpG context: 235259793 Total methylated C's in CHG context: 28549310 Total methylated C's in CHH context: 81164170 Total C to T conversions in CpG context: 561418412 Total C to T conversions in CHG context: 1182055762 Total C to T conversions in CHH context: 3814182774 C methylated in CpG context: 29.5% C methylated in CHG context: 2.4% C methylated in CHH context: 2.1%