EPI-187_S20_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 7098905 lines in total Total number of methylation call strings processed: 14197810 Final Cytosine Methylation Report ================================= Total number of C's analysed: 150742463 Total methylated C's in CpG context: 6936899 Total methylated C's in CHG context: 814250 Total methylated C's in CHH context: 2156222 Total C to T conversions in CpG context: 13822954 Total C to T conversions in CHG context: 31050905 Total C to T conversions in CHH context: 95961233 C methylated in CpG context: 33.4% C methylated in CHG context: 2.6% C methylated in CHH context: 2.2%