EPI-181_S16_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 8210265 lines in total Total number of methylation call strings processed: 16420530 Final Cytosine Methylation Report ================================= Total number of C's analysed: 182131746 Total methylated C's in CpG context: 7773669 Total methylated C's in CHG context: 910797 Total methylated C's in CHH context: 2287864 Total C to T conversions in CpG context: 17313389 Total C to T conversions in CHG context: 37265101 Total C to T conversions in CHH context: 116580926 C methylated in CpG context: 31.0% C methylated in CHG context: 2.4% C methylated in CHH context: 1.9%