CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 264623 1922948 12.10 2187571 2 247042 1784644 12.16 2031686 3 246147 1819648 11.92 2065795 4 247416 1830911 11.90 2078327 5 252875 1824181 12.17 2077056 6 253013 1879900 11.86 2132913 7 259175 1878710 12.12 2137885 8 259462 1867956 12.20 2127418 9 259408 1868958 12.19 2128366 10 261994 1868963 12.29 2130957 11 265107 1872469 12.40 2137576 12 263456 1860789 12.40 2124245 13 260084 1847846 12.34 2107930 14 264796 1888635 12.30 2153431 15 265473 1912439 12.19 2177912 16 266606 1898802 12.31 2165408 17 265305 1913082 12.18 2178387 18 263333 1904052 12.15 2167385 19 265748 1895193 12.30 2160941 20 264821 1892900 12.27 2157721 21 264536 1884152 12.31 2148688 22 262549 1882794 12.24 2145343 23 263129 1894203 12.20 2157332 24 262626 1880140 12.26 2142766 25 262457 1904761 12.11 2167218 26 264903 1919317 12.13 2184220 27 265202 1912727 12.18 2177929 28 261943 1902236 12.10 2164179 29 261568 1897882 12.11 2159450 30 260923 1886409 12.15 2147332 31 261232 1877121 12.22 2138353 32 267055 1903309 12.30 2170364 33 264205 1896184 12.23 2160389 34 262633 1889604 12.20 2152237 35 260227 1898367 12.06 2158594 36 258982 1884259 12.08 2143241 37 258819 1892919 12.03 2151738 38 257157 1883462 12.01 2140619 39 261412 1898508 12.10 2159920 40 261040 1884005 12.17 2145045 41 262873 1907926 12.11 2170799 42 256774 1883044 12.00 2139818 43 262050 1890221 12.18 2152271 44 258267 1877465 12.09 2135732 45 254957 1881642 11.93 2136599 46 253029 1865987 11.94 2119016 47 254569 1885091 11.90 2139660 48 254181 1860341 12.02 2114522 49 256629 1867733 12.08 2124362 50 251733 1842907 12.02 2094640 51 254812 1852770 12.09 2107582 52 247836 1849857 11.81 2097693 53 247414 1846810 11.81 2094224 54 249723 1849089 11.90 2098812 55 246209 1845526 11.77 2091735 56 251013 1854545 11.92 2105558 57 248497 1846310 11.86 2094807 58 245227 1830715 11.81 2075942 59 246474 1815946 11.95 2062420 60 241962 1813571 11.77 2055533 61 245506 1823108 11.87 2068614 62 246556 1835140 11.84 2081696 63 246406 1836306 11.83 2082712 64 243092 1808306 11.85 2051398 65 241898 1818519 11.74 2060417 66 242020 1810268 11.79 2052288 67 237952 1796420 11.70 2034372 68 237759 1793283 11.71 2031042 69 238864 1789091 11.78 2027955 70 235234 1764523 11.76 1999757 71 236429 1774311 11.76 2010740 72 232659 1752971 11.72 1985630 73 236662 1754964 11.88 1991626 74 233760 1761807 11.71 1995567 75 228824 1751493 11.55 1980317 76 228588 1738611 11.62 1967199 77 228216 1739853 11.60 1968069 78 226737 1721644 11.64 1948381 79 227252 1719715 11.67 1946967 80 227652 1707719 11.76 1935371 81 222433 1696323 11.59 1918756 82 220540 1685427 11.57 1905967 83 219092 1681975 11.52 1901067 84 218792 1689978 11.46 1908770 85 218627 1682837 11.50 1901464 86 218166 1681520 11.48 1899686 87 217453 1673647 11.50 1891100 88 215928 1657430 11.53 1873358 89 212410 1648003 11.42 1860413 90 211114 1636672 11.43 1847786 91 210373 1635741 11.40 1846114 92 208945 1624804 11.39 1833749 93 209500 1615248 11.48 1824748 94 205642 1599910 11.39 1805552 95 204713 1603890 11.32 1808603 96 202439 1589972 11.29 1792411 97 202947 1580597 11.38 1783544 98 199817 1572766 11.27 1772583 99 198729 1557946 11.31 1756675 100 197623 1549559 11.31 1747182 101 196010 1546854 11.25 1742864 102 193300 1519195 11.29 1712495 103 189486 1504954 11.18 1694440 104 190192 1508259 11.20 1698451 105 188585 1499247 11.17 1687832 106 186966 1488107 11.16 1675073 107 185820 1481714 11.14 1667534 108 182972 1464167 11.11 1647139 109 183213 1458778 11.16 1641991 110 181308 1443461 11.16 1624769 111 178509 1435000 11.06 1613509 112 177297 1415619 11.13 1592916 113 175145 1404364 11.09 1579509 114 173362 1388801 11.10 1562163 115 171779 1380414 11.07 1552193 116 169360 1375615 10.96 1544975 117 169866 1363716 11.08 1533582 118 166881 1347867 11.02 1514748 119 166384 1343494 11.02 1509878 120 163478 1321932 11.01 1485410 121 162258 1313615 10.99 1475873 122 159869 1295124 10.99 1454993 123 159202 1288672 11.00 1447874 124 157005 1269625 11.01 1426630 125 153641 1259729 10.87 1413370 126 151270 1242499 10.85 1393769 127 149601 1235623 10.80 1385224 128 149113 1231365 10.80 1380478 129 147606 1214210 10.84 1361816 130 145903 1199903 10.84 1345806 131 144631 1189765 10.84 1334396 132 143144 1174712 10.86 1317856 133 140412 1164912 10.76 1305324 134 138146 1147803 10.74 1285949 135 123511 1127133 9.88 1250644 136 58415 1054636 5.25 1113051 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 14580 3525694 0.41 3540274 2 12658 2991154 0.42 3003812 3 11174 2878045 0.39 2889219 4 11567 2895987 0.40 2907554 5 11020 2864252 0.38 2875272 6 11614 2816986 0.41 2828600 7 11081 2857479 0.39 2868560 8 11501 2908967 0.39 2920468 9 11287 2865740 0.39 2877027 10 11471 2932363 0.39 2943834 11 11700 2957849 0.39 2969549 12 11280 2950162 0.38 2961442 13 11267 2922160 0.38 2933427 14 11219 2929467 0.38 2940686 15 11095 2908065 0.38 2919160 16 11660 2940848 0.39 2952508 17 11155 2962558 0.38 2973713 18 11054 2929554 0.38 2940608 19 11282 2966708 0.38 2977990 20 11089 2943950 0.38 2955039 21 11077 2940224 0.38 2951301 22 11198 2950290 0.38 2961488 23 10880 2936407 0.37 2947287 24 11078 2948518 0.37 2959596 25 10985 2950017 0.37 2961002 26 11041 2973226 0.37 2984267 27 11095 2933688 0.38 2944783 28 11139 2926980 0.38 2938119 29 10967 2946286 0.37 2957253 30 11229 2911627 0.38 2922856 31 10945 2946673 0.37 2957618 32 11015 2939133 0.37 2950148 33 11277 2950375 0.38 2961652 34 10986 2946175 0.37 2957161 35 10755 2928411 0.37 2939166 36 11103 2936214 0.38 2947317 37 10879 2899437 0.37 2910316 38 10802 2931284 0.37 2942086 39 10964 2912008 0.38 2922972 40 11197 2929007 0.38 2940204 41 10968 2941790 0.37 2952758 42 11093 2956976 0.37 2968069 43 10751 2912970 0.37 2923721 44 11052 2919190 0.38 2930242 45 10971 2898030 0.38 2909001 46 10897 2887514 0.38 2898411 47 11017 2894644 0.38 2905661 48 10696 2912466 0.37 2923162 49 10922 2868266 0.38 2879188 50 10758 2918607 0.37 2929365 51 10908 2869471 0.38 2880379 52 11072 2889052 0.38 2900124 53 10843 2863965 0.38 2874808 54 10915 2865615 0.38 2876530 55 10752 2831719 0.38 2842471 56 10711 2858375 0.37 2869086 57 10880 2813440 0.39 2824320 58 10511 2834286 0.37 2844797 59 10804 2832737 0.38 2843541 60 10868 2852132 0.38 2863000 61 10499 2798202 0.37 2808701 62 10818 2838671 0.38 2849489 63 10784 2805328 0.38 2816112 64 10630 2813458 0.38 2824088 65 10633 2828539 0.37 2839172 66 10578 2801138 0.38 2811716 67 10611 2784307 0.38 2794918 68 10677 2811623 0.38 2822300 69 10525 2769572 0.38 2780097 70 10647 2773219 0.38 2783866 71 10581 2766098 0.38 2776679 72 10506 2743688 0.38 2754194 73 10380 2737681 0.38 2748061 74 10387 2728209 0.38 2738596 75 10164 2698061 0.38 2708225 76 10228 2703903 0.38 2714131 77 10210 2694168 0.38 2704378 78 10364 2690537 0.38 2700901 79 10165 2670447 0.38 2680612 80 10187 2675940 0.38 2686127 81 10132 2641034 0.38 2651166 82 10022 2641329 0.38 2651351 83 10028 2623448 0.38 2633476 84 10187 2617395 0.39 2627582 85 9864 2607163 0.38 2617027 86 9983 2618718 0.38 2628701 87 9831 2575400 0.38 2585231 88 10081 2581790 0.39 2591871 89 9865 2577066 0.38 2586931 90 9994 2561262 0.39 2571256 91 9952 2538963 0.39 2548915 92 9763 2525501 0.39 2535264 93 9701 2504932 0.39 2514633 94 9502 2506323 0.38 2515825 95 9556 2483745 0.38 2493301 96 9561 2469317 0.39 2478878 97 9323 2448135 0.38 2457458 98 9554 2462101 0.39 2471655 99 9438 2434368 0.39 2443806 100 9367 2421664 0.39 2431031 101 9366 2403882 0.39 2413248 102 9294 2385883 0.39 2395177 103 9291 2360436 0.39 2369727 104 9335 2360464 0.39 2369799 105 9014 2332885 0.38 2341899 106 9298 2325374 0.40 2334672 107 8816 2309064 0.38 2317880 108 8997 2295693 0.39 2304690 109 8910 2281174 0.39 2290084 110 9174 2282081 0.40 2291255 111 9160 2244125 0.41 2253285 112 8812 2231149 0.39 2239961 113 8584 2196672 0.39 2205256 114 8825 2185702 0.40 2194527 115 8518 2155660 0.39 2164178 116 8560 2159025 0.39 2167585 117 8832 2138848 0.41 2147680 118 8557 2121499 0.40 2130056 119 8502 2105966 0.40 2114468 120 8705 2090719 0.41 2099424 121 8735 2055773 0.42 2064508 122 8472 2053484 0.41 2061956 123 8490 2016047 0.42 2024537 124 8424 2003715 0.42 2012139 125 8476 1978676 0.43 1987152 126 8482 1958064 0.43 1966546 127 8422 1929999 0.43 1938421 128 8616 1923838 0.45 1932454 129 8578 1902079 0.45 1910657 130 8828 1885650 0.47 1894478 131 9059 1871761 0.48 1880820 132 9111 1848791 0.49 1857902 133 9005 1817880 0.49 1826885 134 8568 1804401 0.47 1812969 135 7210 1751686 0.41 1758896 136 2587 1613945 0.16 1616532 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 51680 10645512 0.48 10697192 2 54959 11275320 0.49 11330279 3 49980 11337283 0.44 11387263 4 54096 11320549 0.48 11374645 5 50607 11272273 0.45 11322880 6 55043 11236626 0.49 11291669 7 50091 11170013 0.45 11220104 8 53479 11281700 0.47 11335179 9 48621 11183391 0.43 11232012 10 53573 11218790 0.48 11272363 11 49328 11150707 0.44 11200035 12 52870 11126175 0.47 11179045 13 49530 11175113 0.44 11224643 14 52180 11203019 0.46 11255199 15 49413 11180782 0.44 11230195 16 52106 11115758 0.47 11167864 17 48934 11245967 0.43 11294901 18 52257 11217506 0.46 11269763 19 50319 11231761 0.45 11282080 20 51228 11171608 0.46 11222836 21 48885 11082313 0.44 11131198 22 51447 11058044 0.46 11109491 23 47640 11075627 0.43 11123267 24 50882 11107537 0.46 11158419 25 48482 11113421 0.43 11161903 26 50921 11170130 0.45 11221051 27 48385 11235722 0.43 11284107 28 50579 11155623 0.45 11206202 29 47193 11165134 0.42 11212327 30 50743 11109672 0.45 11160415 31 46526 11041202 0.42 11087728 32 48550 11086257 0.44 11134807 33 46959 11022959 0.42 11069918 34 50604 11106399 0.45 11157003 35 46794 11113793 0.42 11160587 36 48411 11122836 0.43 11171247 37 46629 11064822 0.42 11111451 38 48597 11092224 0.44 11140821 39 46153 11066835 0.42 11112988 40 48092 11032722 0.43 11080814 41 46469 11037619 0.42 11084088 42 47568 10981819 0.43 11029387 43 45503 10970534 0.41 11016037 44 46438 11033583 0.42 11080021 45 45676 11048567 0.41 11094243 46 48246 10983472 0.44 11031718 47 45178 10993732 0.41 11038910 48 47228 10911800 0.43 10959028 49 44981 10968487 0.41 11013468 50 46003 10966211 0.42 11012214 51 44102 10977438 0.40 11021540 52 47620 10926944 0.43 10974564 53 44921 10939456 0.41 10984377 54 47271 10931492 0.43 10978763 55 43731 10868008 0.40 10911739 56 44761 10925419 0.41 10970180 57 43984 10952315 0.40 10996299 58 45688 10869914 0.42 10915602 59 43602 10936869 0.40 10980471 60 45486 10869183 0.42 10914669 61 43589 10800770 0.40 10844359 62 43920 10853678 0.40 10897598 63 43349 10768252 0.40 10811601 64 44110 10751205 0.41 10795315 65 42398 10772406 0.39 10814804 66 44392 10768920 0.41 10813312 67 42255 10759713 0.39 10801968 68 43063 10780234 0.40 10823297 69 41480 10711942 0.39 10753422 70 42986 10649309 0.40 10692295 71 41707 10683918 0.39 10725625 72 42579 10600137 0.40 10642716 73 41473 10588535 0.39 10630008 74 42706 10592082 0.40 10634788 75 40747 10507614 0.39 10548361 76 41847 10527425 0.40 10569272 77 39909 10496369 0.38 10536278 78 41983 10432899 0.40 10474882 79 40338 10444733 0.38 10485071 80 41515 10401511 0.40 10443026 81 39642 10333876 0.38 10373518 82 41298 10288327 0.40 10329625 83 39123 10230106 0.38 10269229 84 39825 10168643 0.39 10208468 85 39310 10141237 0.39 10180547 86 39798 10144288 0.39 10184086 87 38572 10097620 0.38 10136192 88 39527 10041517 0.39 10081044 89 38217 10032855 0.38 10071072 90 39579 9972301 0.40 10011880 91 38398 9956492 0.38 9994890 92 38672 9903821 0.39 9942493 93 37715 9813823 0.38 9851538 94 38916 9751841 0.40 9790757 95 36689 9712247 0.38 9748936 96 38671 9668959 0.40 9707630 97 36600 9663123 0.38 9699723 98 37478 9656453 0.39 9693931 99 36344 9594655 0.38 9630999 100 37370 9543621 0.39 9580991 101 35718 9471639 0.38 9507357 102 36593 9382597 0.39 9419190 103 35834 9294573 0.38 9330407 104 35402 9226495 0.38 9261897 105 34739 9161296 0.38 9196035 106 35874 9145063 0.39 9180937 107 35497 9124597 0.39 9160094 108 35100 9063961 0.39 9099061 109 34916 9034847 0.38 9069763 110 34553 8954084 0.38 8988637 111 33849 8873765 0.38 8907614 112 34541 8789677 0.39 8824218 113 33827 8724038 0.39 8757865 114 34329 8643056 0.40 8677385 115 33286 8538902 0.39 8572188 116 33300 8529788 0.39 8563088 117 32439 8475572 0.38 8508011 118 33725 8422701 0.40 8456426 119 32496 8369315 0.39 8401811 120 33038 8265792 0.40 8298830 121 32028 8209521 0.39 8241549 122 32276 8120876 0.40 8153152 123 31493 8028780 0.39 8060273 124 32524 7946881 0.41 7979405 125 31662 7856263 0.40 7887925 126 32113 7785599 0.41 7817712 127 31432 7730116 0.40 7761548 128 31341 7694195 0.41 7725536 129 32098 7623784 0.42 7655882 130 32672 7538269 0.43 7570941 131 33085 7464027 0.44 7497112 132 34194 7360001 0.46 7394195 133 35289 7267835 0.48 7303124 134 34730 7201441 0.48 7236171 135 26710 7088387 0.38 7115097 136 13589 6708802 0.20 6722391 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 120918 985504 10.93 1106422 2 110471 897442 10.96 1007913 3 107583 899095 10.69 1006678 4 106741 889029 10.72 995770 5 107815 878803 10.93 986618 6 105742 890590 10.61 996332 7 106440 878525 10.81 984965 8 105666 861779 10.92 967445 9 104961 851212 10.98 956173 10 104017 838538 11.04 942555 11 103109 827075 11.08 930184 12 101107 808632 11.11 909739 13 99271 793828 11.12 893099 14 97885 793492 10.98 891377 15 96912 795228 10.86 892140 16 95817 781392 10.92 877209 17 93517 774536 10.77 868053 18 92187 761182 10.80 853369 19 91970 746518 10.97 838488 20 89834 734696 10.90 824530 21 88377 721965 10.91 810342 22 87032 709042 10.93 796074 23 85069 698244 10.86 783313 24 83615 684585 10.88 768200 25 82729 682039 10.82 764768 26 81767 678140 10.76 759907 27 81400 666573 10.88 747973 28 77798 655783 10.61 733581 29 77010 644568 10.67 721578 30 76335 629889 10.81 706224 31 74869 616705 10.83 691574 32 75656 615337 10.95 690993 33 73501 600790 10.90 674291 34 71689 588390 10.86 660079 35 70285 586641 10.70 656926 36 68876 571049 10.76 639925 37 67737 567146 10.67 634883 38 66309 557089 10.64 623398 39 66918 551276 10.82 618194 40 64694 541537 10.67 606231 41 65181 537727 10.81 602908 42 61966 523452 10.58 585418 43 62343 518008 10.74 580351 44 60560 505575 10.70 566135 45 59021 499704 10.56 558725 46 57512 486160 10.58 543672 47 57305 484491 10.58 541796 48 56195 471700 10.65 527895 49 56081 467939 10.70 524020 50 53592 455654 10.52 509246 51 53753 448270 10.71 502023 52 51967 441520 10.53 493487 53 50519 433996 10.43 484515 54 50895 425581 10.68 476476 55 49149 420012 10.48 469161 56 48901 414304 10.56 463205 57 47928 408019 10.51 455947 58 46515 398738 10.45 445253 59 46463 390786 10.63 437249 60 44421 383752 10.37 428173 61 44263 381849 10.39 426112 62 44405 377406 10.53 421811 63 43923 372031 10.56 415954 64 41960 359697 10.45 401657 65 41704 356419 10.48 398123 66 40650 349641 10.42 390291 67 39087 342250 10.25 381337 68 38711 336827 10.31 375538 69 39071 331991 10.53 371062 70 37926 324775 10.46 362701 71 37755 321662 10.50 359417 72 36168 311876 10.39 348044 73 36217 308801 10.50 345018 74 35962 305116 10.54 341078 75 34611 297980 10.41 332591 76 33651 291345 10.35 324996 77 32756 288227 10.20 320983 78 32630 281339 10.39 313969 79 32229 279001 10.36 311230 80 31700 273272 10.39 304972 81 30789 268291 10.29 299080 82 30259 262245 10.34 292504 83 29924 257750 10.40 287674 84 29447 256512 10.30 285959 85 29260 252763 10.38 282023 86 28036 247035 10.19 275071 87 27886 243100 10.29 270986 88 27054 238205 10.20 265259 89 26620 233011 10.25 259631 90 25666 229344 10.06 255010 91 25422 228561 10.01 253983 92 25199 223131 10.15 248330 93 25172 219795 10.28 244967 94 24060 215382 10.05 239442 95 24069 212968 10.15 237037 96 23367 207423 10.12 230790 97 22937 204474 10.09 227411 98 22142 200718 9.94 222860 99 21883 196398 10.03 218281 100 21500 193037 10.02 214537 101 21514 191171 10.12 212685 102 20716 185777 10.03 206493 103 20082 182594 9.91 202676 104 20156 181052 10.02 201208 105 19617 178291 9.91 197908 106 19001 174081 9.84 193082 107 19007 171628 9.97 190635 108 18321 167277 9.87 185598 109 18331 165546 9.97 183877 110 17837 161648 9.94 179485 111 17551 159883 9.89 177434 112 17291 156521 9.95 173812 113 16892 153798 9.90 170690 114 16366 150941 9.78 167307 115 16153 148319 9.82 164472 116 15786 146195 9.75 161981 117 15761 143248 9.91 159009 118 15330 139884 9.88 155214 119 15118 138506 9.84 153624 120 14633 134741 9.80 149374 121 14570 132735 9.89 147305 122 14028 129496 9.77 143524 123 13922 128789 9.76 142711 124 13637 125574 9.80 139211 125 13308 123938 9.70 137246 126 12735 121212 9.51 133947 127 12570 118607 9.58 131177 128 12455 116796 9.64 129251 129 12430 114952 9.76 127382 130 11965 111833 9.66 123798 131 11824 110086 9.70 121910 132 11324 108740 9.43 120064 133 11230 106590 9.53 117820 134 10751 102963 9.45 113714 135 9611 101281 8.67 110892 136 4956 86666 5.41 91622 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 7650 1819117 0.42 1826767 2 6604 1512260 0.43 1518864 3 5571 1423780 0.39 1429351 4 5673 1411138 0.40 1416811 5 5434 1375924 0.39 1381358 6 5269 1330239 0.39 1335508 7 5367 1337564 0.40 1342931 8 5353 1342275 0.40 1347628 9 5232 1303420 0.40 1308652 10 5305 1315999 0.40 1321304 11 5122 1313304 0.39 1318426 12 4974 1291554 0.38 1296528 13 4787 1257546 0.38 1262333 14 4700 1240517 0.38 1245217 15 4373 1211483 0.36 1215856 16 4638 1206698 0.38 1211336 17 4493 1200455 0.37 1204948 18 4429 1167851 0.38 1172280 19 4343 1166634 0.37 1170977 20 4419 1144960 0.38 1149379 21 4236 1129298 0.37 1133534 22 4197 1114662 0.38 1118859 23 4075 1090504 0.37 1094579 24 3946 1076470 0.37 1080416 25 3758 1061596 0.35 1065354 26 3873 1045817 0.37 1049690 27 3835 1022012 0.37 1025847 28 3717 1005691 0.37 1009408 29 3607 998084 0.36 1001691 30 3551 974304 0.36 977855 31 3664 970771 0.38 974435 32 3460 954094 0.36 957554 33 3513 942031 0.37 945544 34 3318 927105 0.36 930423 35 3216 904319 0.35 907535 36 3162 890503 0.35 893665 37 3156 865888 0.36 869044 38 3171 862552 0.37 865723 39 3113 847989 0.37 851102 40 2993 840348 0.35 843341 41 2901 830556 0.35 833457 42 2933 823675 0.35 826608 43 2906 797024 0.36 799930 44 2885 786938 0.37 789823 45 2842 769679 0.37 772521 46 2760 752685 0.37 755445 47 2721 741756 0.37 744477 48 2572 734621 0.35 737193 49 2599 713786 0.36 716385 50 2462 718118 0.34 720580 51 2544 695726 0.36 698270 52 2492 690823 0.36 693315 53 2417 674694 0.36 677111 54 2461 664822 0.37 667283 55 2413 646725 0.37 649138 56 2349 639210 0.37 641559 57 2222 621227 0.36 623449 58 2245 616427 0.36 618672 59 2181 605632 0.36 607813 60 2134 602922 0.35 605056 61 2105 582561 0.36 584666 62 2089 583601 0.36 585690 63 2088 568748 0.37 570836 64 2016 560427 0.36 562443 65 2083 555134 0.37 557217 66 1963 540868 0.36 542831 67 1899 529417 0.36 531316 68 1932 524528 0.37 526460 69 1920 511746 0.37 513666 70 1882 505825 0.37 507707 71 1785 497588 0.36 499373 72 1803 487980 0.37 489783 73 1649 480187 0.34 481836 74 1690 471513 0.36 473203 75 1669 458556 0.36 460225 76 1712 454630 0.38 456342 77 1686 444862 0.38 446548 78 1623 436022 0.37 437645 79 1545 427558 0.36 429103 80 1521 424476 0.36 425997 81 1509 413030 0.36 414539 82 1453 408209 0.35 409662 83 1480 401608 0.37 403088 84 1430 394656 0.36 396086 85 1446 387797 0.37 389243 86 1401 384124 0.36 385525 87 1352 373164 0.36 374516 88 1379 367849 0.37 369228 89 1313 360867 0.36 362180 90 1312 356391 0.37 357703 91 1284 347930 0.37 349214 92 1313 342222 0.38 343535 93 1246 336367 0.37 337613 94 1205 333773 0.36 334978 95 1191 327272 0.36 328463 96 1231 319760 0.38 320991 97 1075 311767 0.34 312842 98 1152 308864 0.37 310016 99 1146 302700 0.38 303846 100 1086 298016 0.36 299102 101 1070 292475 0.36 293545 102 1057 288646 0.36 289703 103 1030 281939 0.36 282969 104 1032 280649 0.37 281681 105 975 273662 0.36 274637 106 981 268242 0.36 269223 107 999 263797 0.38 264796 108 967 258551 0.37 259518 109 945 254847 0.37 255792 110 919 252178 0.36 253097 111 977 245096 0.40 246073 112 995 242225 0.41 243220 113 916 236423 0.39 237339 114 932 233591 0.40 234523 115 920 228497 0.40 229417 116 876 224731 0.39 225607 117 895 220658 0.40 221553 118 867 216074 0.40 216941 119 865 212788 0.40 213653 120 809 208988 0.39 209797 121 841 203394 0.41 204235 122 810 202078 0.40 202888 123 770 196719 0.39 197489 124 777 194706 0.40 195483 125 788 190647 0.41 191435 126 768 186891 0.41 187659 127 820 182196 0.45 183016 128 709 180347 0.39 181056 129 737 176181 0.42 176918 130 770 173046 0.44 173816 131 723 169785 0.42 170508 132 720 166411 0.43 167131 133 654 161876 0.40 162530 134 646 160560 0.40 161206 135 527 151175 0.35 151702 136 225 129779 0.17 130004 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 25864 5745048 0.45 5770912 2 26104 6003475 0.43 6029579 3 24671 5952069 0.41 5976740 4 24777 5855310 0.42 5880087 5 23987 5750110 0.42 5774097 6 24400 5662942 0.43 5687342 7 22721 5558077 0.41 5580798 8 22832 5551438 0.41 5574270 9 21616 5436207 0.40 5457823 10 22425 5406051 0.41 5428476 11 20945 5308251 0.39 5329196 12 21237 5234276 0.40 5255513 13 20323 5175536 0.39 5195859 14 20552 5117369 0.40 5137921 15 19729 5032560 0.39 5052289 16 19821 4929569 0.40 4949390 17 19078 4913051 0.39 4932129 18 19159 4836907 0.39 4856066 19 18825 4786298 0.39 4805123 20 18420 4701179 0.39 4719599 21 17669 4608700 0.38 4626369 22 18045 4543462 0.40 4561507 23 16597 4481890 0.37 4498487 24 17009 4428894 0.38 4445903 25 16393 4360357 0.37 4376750 26 16458 4307216 0.38 4323674 27 16154 4271535 0.38 4287689 28 16146 4181913 0.38 4198059 29 15043 4125872 0.36 4140915 30 15592 4057067 0.38 4072659 31 14843 3983094 0.37 3997937 32 14897 3943929 0.38 3958826 33 14141 3867400 0.36 3881541 34 14854 3827923 0.39 3842777 35 14141 3761533 0.37 3775674 36 14009 3709252 0.38 3723261 37 13401 3628336 0.37 3641737 38 13339 3582825 0.37 3596164 39 13256 3522867 0.37 3536123 40 13179 3463632 0.38 3476811 41 12740 3418607 0.37 3431347 42 12702 3361368 0.38 3374070 43 12234 3308888 0.37 3321122 44 11935 3279332 0.36 3291267 45 11784 3229179 0.36 3240963 46 11982 3150086 0.38 3162068 47 11331 3102734 0.36 3114065 48 11630 3033459 0.38 3045089 49 11314 3003157 0.38 3014471 50 11249 2959796 0.38 2971045 51 10508 2925063 0.36 2935571 52 11105 2874924 0.38 2886029 53 10533 2840418 0.37 2850951 54 10660 2790379 0.38 2801039 55 10047 2733533 0.37 2743580 56 10054 2696874 0.37 2706928 57 9853 2658549 0.37 2668402 58 10047 2598981 0.39 2609028 59 9438 2571995 0.37 2581433 60 9540 2523609 0.38 2533149 61 9081 2470986 0.37 2480067 62 8995 2454312 0.37 2463307 63 9079 2402266 0.38 2411345 64 8988 2362887 0.38 2371875 65 8661 2330727 0.37 2339388 66 8632 2291177 0.38 2299809 67 8429 2248808 0.37 2257237 68 8166 2219290 0.37 2227456 69 7928 2172172 0.36 2180100 70 8243 2129793 0.39 2138036 71 7905 2112612 0.37 2120517 72 7849 2069735 0.38 2077584 73 7405 2040328 0.36 2047733 74 7793 2017190 0.38 2024983 75 7179 1968512 0.36 1975691 76 7286 1941793 0.37 1949079 77 7226 1906506 0.38 1913732 78 7271 1863157 0.39 1870428 79 6891 1841177 0.37 1848068 80 6788 1809327 0.37 1816115 81 6482 1776069 0.36 1782551 82 6723 1747500 0.38 1754223 83 6468 1715322 0.38 1721790 84 6342 1684610 0.38 1690952 85 6407 1661665 0.38 1668072 86 6123 1637849 0.37 1643972 87 5815 1603693 0.36 1609508 88 6178 1571153 0.39 1577331 89 5769 1547103 0.37 1552872 90 6012 1520133 0.39 1526145 91 5792 1500928 0.38 1506720 92 5560 1475593 0.38 1481153 93 5375 1446511 0.37 1451886 94 5620 1420841 0.39 1426461 95 5222 1396960 0.37 1402182 96 5175 1373695 0.38 1378870 97 5140 1354489 0.38 1359629 98 5113 1334578 0.38 1339691 99 4954 1308985 0.38 1313939 100 4894 1289479 0.38 1294373 101 4860 1265034 0.38 1269894 102 4739 1242488 0.38 1247227 103 4625 1215448 0.38 1220073 104 4494 1193656 0.38 1198150 105 4333 1172376 0.37 1176709 106 4468 1159927 0.38 1164395 107 4387 1142644 0.38 1147031 108 4233 1121464 0.38 1125697 109 4233 1104692 0.38 1108925 110 4114 1080667 0.38 1084781 111 4111 1058941 0.39 1063052 112 4104 1040749 0.39 1044853 113 3926 1027026 0.38 1030952 114 4049 1007971 0.40 1012020 115 3835 985530 0.39 989365 116 3713 975816 0.38 979529 117 3783 958719 0.39 962502 118 3716 942094 0.39 945810 119 3561 924836 0.38 928397 120 3533 903989 0.39 907522 121 3527 890068 0.39 893595 122 3468 871738 0.40 875206 123 3344 856058 0.39 859402 124 3390 843726 0.40 847116 125 3285 825003 0.40 828288 126 3313 812084 0.41 815397 127 3251 797501 0.41 800752 128 3197 786057 0.41 789254 129 3198 771259 0.41 774457 130 3235 753292 0.43 756527 131 3196 740082 0.43 743278 132 3209 721690 0.44 724899 133 3134 708440 0.44 711574 134 2983 694184 0.43 697167 135 2423 675662 0.36 678085 136 1312 605894 0.22 607206