CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 238709 1653199 12.62 1891908 2 223667 1530871 12.75 1754538 3 222957 1562755 12.49 1785712 4 225220 1572967 12.52 1798187 5 228615 1572762 12.69 1801377 6 229722 1617071 12.44 1846793 7 234208 1618449 12.64 1852657 8 235045 1605803 12.77 1840848 9 234645 1606293 12.75 1840938 10 236757 1606705 12.84 1843462 11 238911 1600674 12.99 1839585 12 237563 1593914 12.97 1831477 13 235301 1585601 12.92 1820902 14 238148 1621424 12.81 1859572 15 240569 1642851 12.77 1883420 16 240795 1632136 12.86 1872931 17 240230 1647120 12.73 1887350 18 238139 1636000 12.71 1874139 19 240834 1630301 12.87 1871135 20 239353 1625157 12.84 1864510 21 238849 1620625 12.84 1859474 22 237541 1613380 12.83 1850921 23 237056 1625398 12.73 1862454 24 236901 1612837 12.81 1849738 25 238152 1641501 12.67 1879653 26 238844 1648066 12.66 1886910 27 239151 1643901 12.70 1883052 28 236777 1634834 12.65 1871611 29 236793 1632178 12.67 1868971 30 236433 1623222 12.71 1859655 31 236044 1614180 12.76 1850224 32 240639 1634632 12.83 1875271 33 238129 1630579 12.74 1868708 34 237258 1622604 12.76 1859862 35 235497 1633034 12.60 1868531 36 234908 1622016 12.65 1856924 37 234274 1629922 12.57 1864196 38 233070 1620796 12.57 1853866 39 238219 1631940 12.74 1870159 40 235394 1621053 12.68 1856447 41 238324 1641235 12.68 1879559 42 232216 1618586 12.55 1850802 43 236898 1625198 12.72 1862096 44 234514 1612981 12.69 1847495 45 231286 1619242 12.50 1850528 46 229339 1602763 12.52 1832102 47 229990 1621830 12.42 1851820 48 230662 1604790 12.57 1835452 49 233038 1608093 12.66 1841131 50 227837 1591296 12.52 1819133 51 231305 1599709 12.63 1831014 52 226921 1594017 12.46 1820938 53 224966 1594857 12.36 1819823 54 227731 1595748 12.49 1823479 55 224651 1590965 12.37 1815616 56 227755 1597908 12.48 1825663 57 226348 1590615 12.46 1816963 58 224063 1578937 12.43 1803000 59 223969 1571573 12.47 1795542 60 221596 1568157 12.38 1789753 61 223544 1578873 12.40 1802417 62 224591 1583937 12.42 1808528 63 224866 1585484 12.42 1810350 64 222126 1561565 12.45 1783691 65 220393 1573668 12.28 1794061 66 219669 1566414 12.30 1786083 67 217497 1555652 12.27 1773149 68 216793 1552605 12.25 1769398 69 217352 1552410 12.28 1769762 70 216186 1528487 12.39 1744673 71 216980 1535449 12.38 1752429 72 214247 1518166 12.37 1732413 73 215191 1522450 12.38 1737641 74 214794 1529853 12.31 1744647 75 210138 1522536 12.13 1732674 76 208456 1509480 12.13 1717936 77 207897 1513332 12.08 1721229 78 207252 1496106 12.17 1703358 79 208688 1499752 12.22 1708440 80 207031 1489225 12.21 1696256 81 204688 1479415 12.15 1684103 82 203231 1469804 12.15 1673035 83 202792 1469007 12.13 1671799 84 202620 1474208 12.08 1676828 85 202415 1469130 12.11 1671545 86 201256 1468136 12.06 1669392 87 200459 1462126 12.06 1662585 88 199853 1450733 12.11 1650586 89 196368 1442786 11.98 1639154 90 196049 1432114 12.04 1628163 91 194456 1436579 11.92 1631035 92 194057 1426456 11.98 1620513 93 193792 1420284 12.01 1614076 94 190458 1406874 11.92 1597332 95 189170 1408253 11.84 1597423 96 188441 1401326 11.85 1589767 97 189258 1391428 11.97 1580686 98 186442 1387054 11.85 1573496 99 185308 1375031 11.88 1560339 100 184353 1363612 11.91 1547965 101 183395 1365210 11.84 1548605 102 180005 1343473 11.82 1523478 103 177475 1331509 11.76 1508984 104 177599 1331981 11.76 1509580 105 176396 1327026 11.73 1503422 106 174853 1316719 11.72 1491572 107 173873 1311645 11.70 1485518 108 171733 1297380 11.69 1469113 109 171796 1296327 11.70 1468123 110 170391 1280502 11.74 1450893 111 168429 1276070 11.66 1444499 112 167150 1260409 11.71 1427559 113 165179 1255405 11.63 1420584 114 163520 1239990 11.65 1403510 115 161651 1233753 11.58 1395404 116 160854 1224760 11.61 1385614 117 160048 1218288 11.61 1378336 118 157825 1207291 11.56 1365116 119 158289 1204374 11.62 1362663 120 154933 1187078 11.54 1342011 121 153540 1177538 11.54 1331078 122 151660 1164831 11.52 1316491 123 150862 1157649 11.53 1308511 124 148936 1143747 11.52 1292683 125 147209 1135795 11.47 1283004 126 144557 1123537 11.40 1268094 127 143518 1113645 11.42 1257163 128 142319 1109141 11.37 1251460 129 141232 1097957 11.40 1239189 130 139269 1085731 11.37 1225000 131 138654 1076676 11.41 1215330 132 136898 1064779 11.39 1201677 133 135093 1057831 11.32 1192924 134 132335 1043554 11.25 1175889 135 118354 1027825 10.33 1146179 136 56569 956411 5.58 1012980 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 13001 3056338 0.42 3069339 2 11426 2593685 0.44 2605111 3 10070 2495737 0.40 2505807 4 10148 2511935 0.40 2522083 5 9796 2484512 0.39 2494308 6 10098 2447222 0.41 2457320 7 9894 2477837 0.40 2487731 8 10581 2528755 0.42 2539336 9 10009 2486963 0.40 2496972 10 10088 2540533 0.40 2550621 11 10075 2564813 0.39 2574888 12 9876 2555289 0.39 2565165 13 9756 2537334 0.38 2547090 14 9977 2542071 0.39 2552048 15 9737 2522562 0.38 2532299 16 10094 2554742 0.39 2564836 17 9820 2567213 0.38 2577033 18 9600 2543427 0.38 2553027 19 9780 2573464 0.38 2583244 20 9891 2552800 0.39 2562691 21 9901 2552654 0.39 2562555 22 9558 2566437 0.37 2575995 23 9917 2538876 0.39 2548793 24 9745 2555522 0.38 2565267 25 9892 2559707 0.38 2569599 26 9728 2579528 0.38 2589256 27 9858 2544094 0.39 2553952 28 9825 2540313 0.39 2550138 29 9562 2553630 0.37 2563192 30 9801 2531134 0.39 2540935 31 9457 2558969 0.37 2568426 32 9541 2550995 0.37 2560536 33 9770 2560602 0.38 2570372 34 9747 2557844 0.38 2567591 35 9626 2539798 0.38 2549424 36 9486 2551031 0.37 2560517 37 9496 2517321 0.38 2526817 38 9712 2545858 0.38 2555570 39 9682 2528002 0.38 2537684 40 9608 2543511 0.38 2553119 41 9544 2553809 0.37 2563353 42 9962 2571675 0.39 2581637 43 9467 2531592 0.37 2541059 44 9474 2538747 0.37 2548221 45 9488 2513134 0.38 2522622 46 9368 2509081 0.37 2518449 47 9387 2513006 0.37 2522393 48 9601 2530623 0.38 2540224 49 9659 2497454 0.39 2507113 50 9648 2541288 0.38 2550936 51 9644 2492331 0.39 2501975 52 9638 2514614 0.38 2524252 53 9401 2492466 0.38 2501867 54 9571 2494051 0.38 2503622 55 9365 2468510 0.38 2477875 56 9364 2488909 0.37 2498273 57 9453 2454686 0.38 2464139 58 9348 2467500 0.38 2476848 59 9391 2471373 0.38 2480764 60 9614 2490276 0.38 2499890 61 9320 2445798 0.38 2455118 62 9405 2478614 0.38 2488019 63 9249 2446241 0.38 2455490 64 9404 2457352 0.38 2466756 65 9414 2467669 0.38 2477083 66 9339 2447356 0.38 2456695 67 9231 2429864 0.38 2439095 68 9520 2453295 0.39 2462815 69 9370 2421878 0.39 2431248 70 9430 2427733 0.39 2437163 71 9047 2419742 0.37 2428789 72 9072 2402035 0.38 2411107 73 9134 2397143 0.38 2406277 74 9146 2390057 0.38 2399203 75 9073 2365612 0.38 2374685 76 9167 2373276 0.38 2382443 77 9026 2364452 0.38 2373478 78 9116 2354613 0.39 2363729 79 8887 2341240 0.38 2350127 80 9174 2351578 0.39 2360752 81 9011 2318981 0.39 2327992 82 9022 2324305 0.39 2333327 83 8900 2309367 0.38 2318267 84 8914 2307204 0.38 2316118 85 8801 2295910 0.38 2304711 86 8962 2305504 0.39 2314466 87 8735 2275091 0.38 2283826 88 8661 2274913 0.38 2283574 89 8810 2271424 0.39 2280234 90 8822 2264287 0.39 2273109 91 8744 2244722 0.39 2253466 92 8576 2236272 0.38 2244848 93 8826 2217320 0.40 2226146 94 8499 2221322 0.38 2229821 95 8289 2199905 0.38 2208194 96 8667 2192336 0.39 2201003 97 8570 2173560 0.39 2182130 98 8629 2185050 0.39 2193679 99 8571 2162973 0.39 2171544 100 8476 2155252 0.39 2163728 101 8283 2137773 0.39 2146056 102 8464 2125133 0.40 2133597 103 8301 2106193 0.39 2114494 104 8248 2105377 0.39 2113625 105 8063 2079216 0.39 2087279 106 8055 2074069 0.39 2082124 107 8038 2060947 0.39 2068985 108 8156 2053893 0.40 2062049 109 7935 2037183 0.39 2045118 110 8063 2043886 0.39 2051949 111 8030 2010094 0.40 2018124 112 8011 2001697 0.40 2009708 113 8065 1969966 0.41 1978031 114 7913 1963930 0.40 1971843 115 7814 1940088 0.40 1947902 116 7772 1940234 0.40 1948006 117 7988 1921529 0.41 1929517 118 7699 1913050 0.40 1920749 119 7808 1900510 0.41 1908318 120 7951 1885925 0.42 1893876 121 7857 1853346 0.42 1861203 122 7731 1854835 0.42 1862566 123 7545 1823928 0.41 1831473 124 7810 1817197 0.43 1825007 125 7765 1791733 0.43 1799498 126 7719 1778209 0.43 1785928 127 7681 1755838 0.44 1763519 128 7741 1752455 0.44 1760196 129 7822 1729429 0.45 1737251 130 7838 1717933 0.45 1725771 131 8370 1706410 0.49 1714780 132 8230 1689587 0.48 1697817 133 8263 1660729 0.50 1668992 134 7794 1652774 0.47 1660568 135 6423 1602861 0.40 1609284 136 2271 1475936 0.15 1478207 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 48461 9180759 0.53 9229220 2 51429 9730819 0.53 9782248 3 44894 9791155 0.46 9836049 4 49886 9772915 0.51 9822801 5 46082 9725352 0.47 9771434 6 53816 9691839 0.55 9745655 7 47888 9631331 0.49 9679219 8 51185 9735786 0.52 9786971 9 43661 9657819 0.45 9701480 10 47844 9694261 0.49 9742105 11 43340 9645658 0.45 9688998 12 50471 9621836 0.52 9672307 13 46891 9661906 0.48 9708797 14 50692 9687872 0.52 9738564 15 44879 9653072 0.46 9697951 16 47218 9601975 0.49 9649193 17 43536 9712674 0.45 9756210 18 48563 9700400 0.50 9748963 19 46687 9707584 0.48 9754271 20 50443 9666058 0.52 9716501 21 45895 9595401 0.48 9641296 22 47841 9560175 0.50 9608016 23 42367 9578562 0.44 9620929 24 46359 9604459 0.48 9650818 25 43938 9610971 0.46 9654909 26 50079 9657165 0.52 9707244 27 46355 9710687 0.48 9757042 28 49371 9645162 0.51 9694533 29 42183 9654021 0.44 9696204 30 45728 9610746 0.47 9656474 31 41725 9560234 0.43 9601959 32 47114 9605931 0.49 9653045 33 44785 9543829 0.47 9588614 34 49299 9620636 0.51 9669935 35 42803 9617291 0.44 9660094 36 44799 9634618 0.46 9679417 37 40945 9574829 0.43 9615774 38 45329 9601134 0.47 9646463 39 43953 9582642 0.46 9626595 40 47221 9557773 0.49 9604994 41 44520 9559923 0.46 9604443 42 45031 9518230 0.47 9563261 43 40770 9509335 0.43 9550105 44 42240 9559771 0.44 9602011 45 41051 9572466 0.43 9613517 46 46986 9521746 0.49 9568732 47 43754 9531190 0.46 9574944 48 45464 9469438 0.48 9514902 49 40655 9507955 0.43 9548610 50 41603 9511674 0.44 9553277 51 39608 9520949 0.41 9560557 52 45436 9483595 0.48 9529031 53 43160 9495153 0.45 9538313 54 46325 9489406 0.49 9535731 55 41152 9438845 0.43 9479997 56 41335 9490794 0.43 9532129 57 39072 9506035 0.41 9545107 58 42410 9437823 0.45 9480233 59 41608 9494649 0.44 9536257 60 44406 9443410 0.47 9487816 61 41248 9389705 0.44 9430953 62 41596 9432724 0.44 9474320 63 38863 9367056 0.41 9405919 64 40374 9348446 0.43 9388820 65 39265 9366169 0.42 9405434 66 42792 9373313 0.45 9416105 67 41404 9368018 0.44 9409422 68 41644 9386795 0.44 9428439 69 38389 9328183 0.41 9366572 70 39352 9278801 0.42 9318153 71 38058 9312419 0.41 9350477 72 40576 9250604 0.44 9291180 73 39662 9242808 0.43 9282470 74 41717 9245703 0.45 9287420 75 37595 9174800 0.41 9212395 76 38829 9188220 0.42 9227049 77 36479 9170066 0.40 9206545 78 39029 9118855 0.43 9157884 79 38190 9137365 0.42 9175555 80 39903 9096612 0.44 9136515 81 38316 9043563 0.42 9081879 82 38525 9013778 0.43 9052303 83 35740 8965516 0.40 9001256 84 36952 8917514 0.41 8954466 85 36690 8898661 0.41 8935351 86 37833 8904073 0.42 8941906 87 37581 8869108 0.42 8906689 88 38296 8819197 0.43 8857493 89 35681 8820715 0.40 8856396 90 35928 8775008 0.41 8810936 91 34558 8770328 0.39 8804886 92 36077 8723442 0.41 8759519 93 35970 8647418 0.41 8683388 94 37492 8595251 0.43 8632743 95 34986 8560358 0.41 8595344 96 35412 8535324 0.41 8570736 97 33129 8538636 0.39 8571765 98 34874 8529401 0.41 8564275 99 34600 8482211 0.41 8516811 100 36597 8448909 0.43 8485506 101 34424 8388727 0.41 8423151 102 34789 8316941 0.42 8351730 103 32659 8250293 0.39 8282952 104 32333 8191807 0.39 8224140 105 32275 8135421 0.40 8167696 106 34037 8130623 0.42 8164660 107 34084 8112758 0.42 8146842 108 33584 8062633 0.41 8096217 109 32432 8044220 0.40 8076652 110 31745 7975168 0.40 8006913 111 31427 7913684 0.40 7945111 112 32357 7851904 0.41 7884261 113 32127 7802319 0.41 7834446 114 33219 7730331 0.43 7763550 115 31594 7653630 0.41 7685224 116 30860 7634747 0.40 7665607 117 30119 7600383 0.39 7630502 118 31283 7555995 0.41 7587278 119 30617 7514471 0.41 7545088 120 31739 7431332 0.43 7463071 121 31086 7388301 0.42 7419387 122 30794 7318958 0.42 7349752 123 29532 7242640 0.41 7272172 124 29919 7176840 0.42 7206759 125 29560 7094960 0.41 7124520 126 30494 7035718 0.43 7066212 127 30535 6988518 0.44 7019053 128 30130 6970287 0.43 7000417 129 29952 6911196 0.43 6941148 130 30085 6830880 0.44 6860965 131 30743 6780547 0.45 6811290 132 31729 6689065 0.47 6720794 133 33297 6617273 0.50 6650570 134 32748 6557781 0.50 6590529 135 25047 6459332 0.39 6484379 136 12809 6101629 0.21 6114438 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 118150 912810 11.46 1030960 2 107874 829162 11.51 937036 3 106079 834899 11.27 940978 4 105668 826407 11.34 932075 5 106439 819322 11.50 925761 6 105514 829001 11.29 934515 7 105185 820609 11.36 925794 8 104780 803494 11.54 908274 9 102836 796549 11.43 899385 10 103207 785385 11.61 888592 11 102438 772116 11.71 874554 12 99822 758059 11.64 857881 13 98142 743938 11.65 842080 14 97176 746907 11.51 844083 15 97661 749039 11.53 846700 16 95855 733942 11.55 829797 17 94073 731827 11.39 825900 18 92508 718218 11.41 810726 19 92472 706128 11.58 798600 20 90403 694267 11.52 784670 21 89201 682714 11.56 771915 22 87363 670580 11.53 757943 23 86237 662411 11.52 748648 24 84636 649588 11.53 734224 25 83519 651605 11.36 735124 26 82867 646322 11.36 729189 27 81588 639145 11.32 720733 28 79522 627183 11.25 706705 29 78554 615531 11.32 694085 30 77347 604572 11.34 681919 31 75683 592281 11.33 667964 32 76352 591065 11.44 667417 33 74387 578384 11.40 652771 34 73164 567208 11.43 640372 35 72370 564241 11.37 636611 36 70236 552431 11.28 622667 37 69727 549283 11.26 619010 38 68176 539778 11.21 607954 39 68657 536122 11.35 604779 40 67017 524763 11.32 591780 41 67181 522580 11.39 589761 42 64405 508368 11.24 572773 43 64316 502806 11.34 567122 44 63081 491920 11.37 555001 45 61022 486264 11.15 547286 46 59890 475384 11.19 535274 47 59362 475326 11.10 534688 48 58074 464209 11.12 522283 49 58246 459467 11.25 517713 50 55793 446920 11.10 502713 51 56142 442087 11.27 498229 52 54572 435897 11.13 490469 53 52845 427660 11.00 480505 54 52982 422149 11.15 475131 55 51182 415584 10.97 466766 56 51377 410398 11.13 461775 57 49664 403184 10.97 452848 58 48899 397414 10.96 446313 59 48342 388695 11.06 437037 60 47191 383706 10.95 430897 61 47312 379032 11.10 426344 62 46811 376436 11.06 423247 63 46509 371184 11.13 417693 64 44488 359343 11.02 403831 65 43828 356890 10.94 400718 66 43623 350758 11.06 394381 67 42139 343066 10.94 385205 68 41141 338755 10.83 379896 69 41086 334375 10.94 375461 70 40205 326348 10.97 366553 71 40475 323288 11.13 363763 72 38763 316096 10.92 354859 73 38682 311531 11.05 350213 74 38447 309654 11.04 348101 75 36638 302420 10.81 339058 76 36228 296714 10.88 332942 77 35135 294113 10.67 329248 78 35378 286571 10.99 321949 79 34609 283554 10.88 318163 80 34093 279119 10.88 313212 81 32946 273327 10.76 306273 82 32922 269113 10.90 302035 83 31647 264590 10.68 296237 84 31887 262035 10.85 293922 85 31364 258867 10.81 290231 86 30566 254222 10.73 284788 87 30262 250601 10.77 280863 88 29780 245688 10.81 275468 89 29047 241363 10.74 270410 90 28338 237721 10.65 266059 91 27870 235305 10.59 263175 92 27715 230536 10.73 258251 93 27341 227004 10.75 254345 94 26380 223866 10.54 250246 95 26401 221229 10.66 247630 96 25633 216228 10.60 241861 97 25498 212494 10.71 237992 98 24926 209565 10.63 234491 99 24168 204226 10.58 228394 100 24067 202338 10.63 226405 101 23681 200201 10.58 223882 102 22876 195201 10.49 218077 103 22140 192102 10.33 214242 104 22309 189834 10.52 212143 105 21771 187625 10.40 209396 106 21494 184023 10.46 205517 107 21332 181497 10.52 202829 108 20673 177223 10.45 197896 109 20597 174877 10.54 195474 110 19942 170695 10.46 190637 111 19467 169792 10.29 189259 112 19495 165035 10.56 184530 113 19025 163660 10.41 182685 114 18526 161095 10.31 179621 115 18430 158207 10.43 176637 116 18065 155746 10.39 173811 117 17801 153147 10.41 170948 118 17238 150225 10.29 167463 119 17020 148558 10.28 165578 120 16743 144769 10.37 161512 121 16625 142971 10.42 159596 122 15584 139790 10.03 155374 123 15981 138545 10.34 154526 124 15471 136022 10.21 151493 125 15242 133311 10.26 148553 126 14845 129964 10.25 144809 127 14625 129081 10.18 143706 128 14177 127159 10.03 141336 129 13827 125033 9.96 138860 130 13781 122252 10.13 136033 131 13412 120552 10.01 133964 132 13107 117841 10.01 130948 133 12873 116558 9.95 129431 134 12628 113803 9.99 126431 135 11101 110674 9.12 121775 136 5495 96210 5.40 101705 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 7485 1694857 0.44 1702342 2 6125 1412187 0.43 1418312 3 5353 1330642 0.40 1335995 4 5169 1318503 0.39 1323672 5 5059 1290519 0.39 1295578 6 5110 1250531 0.41 1255641 7 5107 1257684 0.40 1262791 8 5164 1261648 0.41 1266812 9 4842 1229163 0.39 1234005 10 5052 1242719 0.40 1247771 11 4774 1238664 0.38 1243438 12 4750 1218611 0.39 1223361 13 4527 1188436 0.38 1192963 14 4572 1176573 0.39 1181145 15 4291 1151741 0.37 1156032 16 4346 1147440 0.38 1151786 17 4182 1142332 0.36 1146514 18 4220 1110085 0.38 1114305 19 4210 1114718 0.38 1118928 20 4141 1093653 0.38 1097794 21 4151 1076246 0.38 1080397 22 3927 1067732 0.37 1071659 23 3873 1042325 0.37 1046198 24 3864 1032987 0.37 1036851 25 3735 1019660 0.36 1023395 26 3701 1008646 0.37 1012347 27 3624 984374 0.37 987998 28 3589 970016 0.37 973605 29 3524 963361 0.36 966885 30 3427 941335 0.36 944762 31 3524 939286 0.37 942810 32 3464 924002 0.37 927466 33 3272 912043 0.36 915315 34 3245 900265 0.36 903510 35 3163 879785 0.36 882948 36 3147 869736 0.36 872883 37 3009 846158 0.35 849167 38 3076 841176 0.36 844252 39 3069 828021 0.37 831090 40 2881 820647 0.35 823528 41 2938 813455 0.36 816393 42 2852 809770 0.35 812622 43 2808 783380 0.36 786188 44 2761 774058 0.36 776819 45 2676 757803 0.35 760479 46 2673 740679 0.36 743352 47 2636 731126 0.36 733762 48 2631 724230 0.36 726861 49 2531 707603 0.36 710134 50 2551 711668 0.36 714219 51 2405 689648 0.35 692053 52 2419 685097 0.35 687516 53 2316 669657 0.34 671973 54 2341 661910 0.35 664251 55 2243 646676 0.35 648919 56 2267 637259 0.35 639526 57 2272 620774 0.36 623046 58 2188 616041 0.35 618229 59 2205 607732 0.36 609937 60 2259 604238 0.37 606497 61 2064 586452 0.35 588516 62 2122 587186 0.36 589308 63 2026 572947 0.35 574973 64 2070 563696 0.37 565766 65 2033 559192 0.36 561225 66 1943 545866 0.35 547809 67 1879 535246 0.35 537125 68 1865 531530 0.35 533395 69 1883 520960 0.36 522843 70 1843 514388 0.36 516231 71 1797 506725 0.35 508522 72 1804 496709 0.36 498513 73 1665 491334 0.34 492999 74 1700 481304 0.35 483004 75 1724 468054 0.37 469778 76 1659 465169 0.36 466828 77 1653 456323 0.36 457976 78 1615 448451 0.36 450066 79 1562 439700 0.35 441262 80 1548 435099 0.35 436647 81 1479 425392 0.35 426871 82 1489 421106 0.35 422595 83 1484 413449 0.36 414933 84 1491 408250 0.36 409741 85 1467 401643 0.36 403110 86 1413 399358 0.35 400771 87 1277 387368 0.33 388645 88 1376 381179 0.36 382555 89 1409 375828 0.37 377237 90 1376 371700 0.37 373076 91 1256 364027 0.34 365283 92 1303 358104 0.36 359407 93 1300 353631 0.37 354931 94 1228 350004 0.35 351232 95 1246 342916 0.36 344162 96 1242 336188 0.37 337430 97 1160 329185 0.35 330345 98 1164 326693 0.36 327857 99 1146 319253 0.36 320399 100 1109 314978 0.35 316087 101 1109 310461 0.36 311570 102 1083 305559 0.35 306642 103 1082 299943 0.36 301025 104 1103 296966 0.37 298069 105 1017 290499 0.35 291516 106 1037 285907 0.36 286944 107 1029 280760 0.37 281789 108 1013 276324 0.37 277337 109 946 271941 0.35 272887 110 1005 269299 0.37 270304 111 956 262901 0.36 263857 112 991 259425 0.38 260416 113 932 254626 0.36 255558 114 938 250169 0.37 251107 115 984 244567 0.40 245551 116 899 242786 0.37 243685 117 887 238733 0.37 239620 118 859 233253 0.37 234112 119 879 230865 0.38 231744 120 838 227504 0.37 228342 121 863 220156 0.39 221019 122 843 218630 0.38 219473 123 838 212956 0.39 213794 124 805 212095 0.38 212900 125 786 208599 0.38 209385 126 827 204717 0.40 205544 127 789 199286 0.39 200075 128 709 197346 0.36 198055 129 772 193421 0.40 194193 130 794 189441 0.42 190235 131 760 187666 0.40 188426 132 748 182599 0.41 183347 133 690 179164 0.38 179854 134 646 176764 0.36 177410 135 549 168610 0.32 169159 136 233 144900 0.16 145133 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 25764 5316120 0.48 5341884 2 25648 5557876 0.46 5583524 3 23361 5522842 0.42 5546203 4 24145 5442923 0.44 5467068 5 23071 5345036 0.43 5368107 6 24575 5267126 0.46 5291701 7 23017 5173564 0.44 5196581 8 23186 5176990 0.45 5200176 9 20116 5081071 0.39 5101187 10 21012 5060002 0.41 5081014 11 19507 4978279 0.39 4997786 12 21118 4909204 0.43 4930322 13 20476 4863419 0.42 4883895 14 21009 4813125 0.43 4834134 15 19134 4729433 0.40 4748567 16 19293 4645914 0.41 4665207 17 17974 4636299 0.39 4654273 18 18933 4572332 0.41 4591265 19 18536 4524807 0.41 4543343 20 19223 4452785 0.43 4472008 21 17652 4380808 0.40 4398460 22 17699 4320975 0.41 4338674 23 16107 4264403 0.38 4280510 24 16746 4217470 0.40 4234216 25 16127 4160096 0.39 4176223 26 17112 4110381 0.41 4127493 27 16305 4083521 0.40 4099826 28 16655 4005119 0.41 4021774 29 14749 3954305 0.37 3969054 30 15246 3894869 0.39 3910115 31 14117 3824416 0.37 3838533 32 15019 3797027 0.39 3812046 33 14686 3724489 0.39 3739175 34 15210 3697920 0.41 3713130 35 14129 3639744 0.39 3653873 36 13831 3587967 0.38 3601798 37 13072 3517317 0.37 3530389 38 13515 3472794 0.39 3486309 39 13233 3422477 0.39 3435710 40 13785 3369680 0.41 3383465 41 13287 3333443 0.40 3346730 42 12941 3275531 0.39 3288472 43 12074 3235065 0.37 3247139 44 11889 3208623 0.37 3220512 45 11550 3161527 0.36 3173077 46 12908 3091830 0.42 3104738 47 11872 3047282 0.39 3059154 48 12058 2980903 0.40 2992961 49 11265 2954781 0.38 2966046 50 10929 2917505 0.37 2928434 51 10467 2883417 0.36 2893884 52 11381 2838552 0.40 2849933 53 10864 2809283 0.39 2820147 54 11287 2764857 0.41 2776144 55 10304 2711271 0.38 2721575 56 10172 2678042 0.38 2688214 57 9711 2645507 0.37 2655218 58 10156 2586270 0.39 2596426 59 9632 2565473 0.37 2575105 60 10078 2517538 0.40 2527616 61 9613 2470093 0.39 2479706 62 9358 2455342 0.38 2464700 63 8923 2406381 0.37 2415304 64 8825 2371455 0.37 2380280 65 8791 2342710 0.37 2351501 66 9353 2306010 0.40 2315363 67 8919 2269382 0.39 2278301 68 8892 2240198 0.40 2249090 69 8141 2193487 0.37 2201628 70 8374 2155253 0.39 2163627 71 8062 2137316 0.38 2145378 72 8268 2098685 0.39 2106953 73 7836 2072244 0.38 2080080 74 8292 2049532 0.40 2057824 75 7439 2006551 0.37 2013990 76 7661 1978114 0.39 1985775 77 7218 1946040 0.37 1953258 78 7455 1907541 0.39 1914996 79 7281 1884795 0.38 1892076 80 7313 1858369 0.39 1865682 81 6835 1823103 0.37 1829938 82 7178 1798961 0.40 1806139 83 6772 1766995 0.38 1773767 84 6420 1740293 0.37 1746713 85 6698 1714505 0.39 1721203 86 6675 1693767 0.39 1700442 87 6411 1659422 0.38 1665833 88 6259 1629007 0.38 1635266 89 6027 1606021 0.37 1612048 90 6137 1579177 0.39 1585314 91 5771 1558774 0.37 1564545 92 5805 1537569 0.38 1543374 93 5770 1508426 0.38 1514196 94 5929 1483114 0.40 1489043 95 5618 1463431 0.38 1469049 96 5478 1438636 0.38 1444114 97 5130 1421473 0.36 1426603 98 5392 1401524 0.38 1406916 99 5154 1376324 0.37 1381478 100 5463 1358119 0.40 1363582 101 5153 1331216 0.39 1336369 102 5107 1309999 0.39 1315106 103 4875 1287371 0.38 1292246 104 4694 1264975 0.37 1269669 105 4658 1244538 0.37 1249196 106 4850 1228300 0.39 1233150 107 4957 1211785 0.41 1216742 108 4618 1191022 0.39 1195640 109 4503 1177980 0.38 1182483 110 4204 1153592 0.36 1157796 111 4286 1131732 0.38 1136018 112 4249 1114780 0.38 1119029 113 4333 1098976 0.39 1103309 114 4305 1080610 0.40 1084915 115 4147 1060749 0.39 1064896 116 3852 1048701 0.37 1052553 117 3807 1031978 0.37 1035785 118 4078 1014742 0.40 1018820 119 3776 999326 0.38 1003102 120 3860 977298 0.39 981158 121 3734 963981 0.39 967715 122 3743 948003 0.39 951746 123 3498 928686 0.38 932184 124 3554 916855 0.39 920409 125 3573 899790 0.40 903363 126 3623 885754 0.41 889377 127 3491 871282 0.40 874773 128 3389 859231 0.39 862620 129 3394 846092 0.40 849486 130 3313 825060 0.40 828373 131 3277 812540 0.40 815817 132 3302 793750 0.41 797052 133 3390 780317 0.43 783707 134 3148 766004 0.41 769152 135 2501 748997 0.33 751498 136 1427 675336 0.21 676763