CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 271168 1537298 14.99 1808466 2 256598 1426241 15.25 1682839 3 256311 1453475 14.99 1709786 4 259620 1468043 15.03 1727663 5 262867 1456722 15.29 1719589 6 265543 1506567 14.98 1772110 7 271596 1501885 15.31 1773481 8 271100 1496169 15.34 1767269 9 272307 1499367 15.37 1771674 10 273794 1500772 15.43 1774566 11 275394 1501280 15.50 1776674 12 274310 1496426 15.49 1770736 13 272265 1486795 15.48 1759060 14 275576 1517273 15.37 1792849 15 278332 1527740 15.41 1806072 16 277720 1520399 15.45 1798119 17 278032 1530846 15.37 1808878 18 274826 1522159 15.29 1796985 19 275408 1520755 15.33 1796163 20 276193 1519218 15.38 1795411 21 276734 1513671 15.46 1790405 22 274087 1507406 15.39 1781493 23 275040 1522198 15.30 1797238 24 272731 1504719 15.34 1777450 25 273549 1526441 15.20 1799990 26 273775 1531132 15.17 1804907 27 273319 1524603 15.20 1797922 28 269785 1520128 15.07 1789913 29 271590 1513510 15.21 1785100 30 269186 1507676 15.15 1776862 31 268182 1500165 15.17 1768347 32 273004 1519325 15.23 1792329 33 270418 1516658 15.13 1787076 34 268364 1507136 15.11 1775500 35 268577 1511549 15.09 1780126 36 264524 1496703 15.02 1761227 37 263619 1501613 14.93 1765232 38 261919 1493601 14.92 1755520 39 265725 1504636 15.01 1770361 40 265094 1487700 15.12 1752794 41 265387 1506542 14.98 1771929 42 259833 1486944 14.87 1746777 43 262740 1489636 14.99 1752376 44 259551 1479023 14.93 1738574 45 255990 1479599 14.75 1735589 46 252888 1462632 14.74 1715520 47 254110 1480961 14.65 1735071 48 253410 1455824 14.83 1709234 49 254650 1456504 14.88 1711154 50 249776 1435601 14.82 1685377 51 249443 1441389 14.75 1690832 52 245062 1433299 14.60 1678361 53 242441 1435106 14.45 1677547 54 244235 1433218 14.56 1677453 55 240515 1424641 14.44 1665156 56 242763 1425903 14.55 1668666 57 240294 1422416 14.45 1662710 58 237604 1403547 14.48 1641151 59 235312 1390860 14.47 1626172 60 233699 1382856 14.46 1616555 61 234032 1385981 14.45 1620013 62 234272 1389292 14.43 1623564 63 231157 1382501 14.33 1613658 64 229087 1359421 14.42 1588508 65 227329 1360110 14.32 1587439 66 225824 1350333 14.33 1576157 67 222583 1336693 14.27 1559276 68 221030 1334836 14.21 1555866 69 221424 1324202 14.33 1545626 70 217191 1299514 14.32 1516705 71 217098 1299590 14.31 1516688 72 212480 1280588 14.23 1493068 73 212573 1275193 14.29 1487766 74 210460 1279472 14.13 1489932 75 205293 1265145 13.96 1470438 76 204425 1250931 14.05 1455356 77 201718 1250088 13.89 1451806 78 199621 1233313 13.93 1432934 79 199414 1226305 13.99 1425719 80 197936 1213284 14.03 1411220 81 193794 1198231 13.92 1392025 82 190718 1185604 13.86 1376322 83 188160 1175593 13.80 1363753 84 187301 1173797 13.76 1361098 85 186221 1163358 13.80 1349579 86 184350 1160913 13.70 1345263 87 182146 1150269 13.67 1332415 88 181474 1135878 13.78 1317352 89 177837 1127687 13.62 1305524 90 175387 1112003 13.62 1287390 91 174318 1109594 13.58 1283912 92 171757 1090392 13.61 1262149 93 170565 1079176 13.65 1249741 94 166102 1065863 13.48 1231965 95 164765 1059615 13.46 1224380 96 162290 1050153 13.39 1212443 97 161374 1038674 13.45 1200048 98 159127 1034128 13.34 1193255 99 157610 1020376 13.38 1177986 100 155702 1004567 13.42 1160269 101 155025 998369 13.44 1153394 102 151107 975000 13.42 1126107 103 147588 962675 13.29 1110263 104 146720 956979 13.29 1103699 105 144641 947140 13.25 1091781 106 142970 935414 13.26 1078384 107 140823 929986 13.15 1070809 108 138855 913579 13.19 1052434 109 137718 907916 13.17 1045634 110 135393 894161 13.15 1029554 111 133417 888219 13.06 1021636 112 131975 871024 13.16 1002999 113 129428 860406 13.08 989834 114 126860 847169 13.02 974029 115 124973 837139 12.99 962112 116 122713 830228 12.88 952941 117 121849 819115 12.95 940964 118 121228 809978 13.02 931206 119 119648 802360 12.98 922008 120 117146 788229 12.94 905375 121 116249 777523 13.01 893772 122 114095 763409 13.00 877504 123 111862 756589 12.88 868451 124 110577 745301 12.92 855878 125 107804 735158 12.79 842962 126 105011 722216 12.69 827227 127 104434 714416 12.75 818850 128 102571 710160 12.62 812731 129 101905 698338 12.73 800243 130 100005 687123 12.71 787128 131 98757 679713 12.69 778470 132 97896 668975 12.77 766871 133 95636 661824 12.63 757460 134 92275 650032 12.43 742307 135 83141 635585 11.57 718726 136 39430 592136 6.24 631566 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 11719 2860397 0.41 2872116 2 10114 2439110 0.41 2449224 3 9262 2344249 0.39 2353511 4 9250 2363124 0.39 2372374 5 8860 2336608 0.38 2345468 6 9227 2298268 0.40 2307495 7 9015 2327536 0.39 2336551 8 9331 2379531 0.39 2388862 9 9286 2337797 0.40 2347083 10 9259 2394091 0.39 2403350 11 9360 2417982 0.39 2427342 12 9158 2412523 0.38 2421681 13 9036 2385080 0.38 2394116 14 9213 2394510 0.38 2403723 15 9094 2376332 0.38 2385426 16 8966 2402924 0.37 2411890 17 9029 2415641 0.37 2424670 18 8883 2396562 0.37 2405445 19 9236 2423683 0.38 2432919 20 9273 2407347 0.38 2416620 21 9211 2394959 0.38 2404170 22 9171 2414545 0.38 2423716 23 9126 2393207 0.38 2402333 24 9313 2405074 0.39 2414387 25 9220 2403429 0.38 2412649 26 9127 2424668 0.38 2433795 27 9169 2395227 0.38 2404396 28 9200 2387930 0.38 2397130 29 9253 2399004 0.38 2408257 30 9366 2368414 0.39 2377780 31 9112 2395717 0.38 2404829 32 9124 2391447 0.38 2400571 33 9531 2399901 0.40 2409432 34 9159 2398052 0.38 2407211 35 8939 2379500 0.37 2388439 36 9064 2386629 0.38 2395693 37 8997 2348026 0.38 2357023 38 9051 2374235 0.38 2383286 39 9299 2354171 0.39 2363470 40 9162 2364980 0.39 2374142 41 9180 2378559 0.38 2387739 42 9001 2379855 0.38 2388856 43 9150 2347066 0.39 2356216 44 9017 2353487 0.38 2362504 45 9188 2322960 0.39 2332148 46 8981 2317132 0.39 2326113 47 9297 2317679 0.40 2326976 48 9227 2321674 0.40 2330901 49 8760 2289140 0.38 2297900 50 8985 2321069 0.39 2330054 51 8885 2276927 0.39 2285812 52 9159 2286502 0.40 2295661 53 8748 2266569 0.38 2275317 54 8944 2259758 0.39 2268702 55 8612 2236258 0.38 2244870 56 8913 2256149 0.39 2265062 57 8773 2214883 0.39 2223656 58 8556 2221231 0.38 2229787 59 8692 2216800 0.39 2225492 60 8925 2218441 0.40 2227366 61 8676 2171862 0.40 2180538 62 8734 2195580 0.40 2204314 63 8439 2161810 0.39 2170249 64 8531 2163624 0.39 2172155 65 8408 2166560 0.39 2174968 66 8601 2144612 0.40 2153213 67 8616 2122452 0.40 2131068 68 8660 2136608 0.40 2145268 69 8539 2096111 0.41 2104650 70 8326 2093269 0.40 2101595 71 8576 2079964 0.41 2088540 72 8102 2052084 0.39 2060186 73 8088 2036330 0.40 2044418 74 7935 2026695 0.39 2034630 75 8039 1997066 0.40 2005105 76 7832 1996448 0.39 2004280 77 7966 1982207 0.40 1990173 78 8036 1970793 0.41 1978829 79 7910 1947456 0.40 1955366 80 7974 1941144 0.41 1949118 81 7718 1903456 0.40 1911174 82 7572 1895240 0.40 1902812 83 7610 1874032 0.40 1881642 84 7569 1861262 0.41 1868831 85 7406 1848278 0.40 1855684 86 7372 1849730 0.40 1857102 87 7393 1816250 0.41 1823643 88 7476 1808654 0.41 1816130 89 7226 1800490 0.40 1807716 90 7250 1778690 0.41 1785940 91 7011 1751708 0.40 1758719 92 7088 1736072 0.41 1743160 93 6984 1712165 0.41 1719149 94 6762 1699844 0.40 1706606 95 6629 1680395 0.39 1687024 96 6659 1668898 0.40 1675557 97 6609 1649076 0.40 1655685 98 6677 1652862 0.40 1659539 99 6581 1623313 0.40 1629894 100 6539 1607255 0.41 1613794 101 6594 1585881 0.41 1592475 102 6471 1564037 0.41 1570508 103 6315 1540645 0.41 1546960 104 6317 1535007 0.41 1541324 105 6197 1507155 0.41 1513352 106 6159 1495736 0.41 1501895 107 5864 1480398 0.39 1486262 108 5956 1467408 0.40 1473364 109 5809 1453975 0.40 1459784 110 5852 1448671 0.40 1454523 111 5941 1414682 0.42 1420623 112 5965 1399491 0.42 1405456 113 5821 1372434 0.42 1378255 114 5776 1355794 0.42 1361570 115 5563 1334268 0.42 1339831 116 5534 1329104 0.41 1334638 117 5448 1313802 0.41 1319250 118 5546 1297528 0.43 1303074 119 5420 1285258 0.42 1290678 120 5276 1269432 0.41 1274708 121 5356 1240855 0.43 1246211 122 5388 1235137 0.43 1240525 123 5211 1206263 0.43 1211474 124 5307 1193231 0.44 1198538 125 5282 1177579 0.45 1182861 126 5148 1156347 0.44 1161495 127 5016 1137815 0.44 1142831 128 5254 1132107 0.46 1137361 129 5388 1113153 0.48 1118541 130 5838 1101252 0.53 1107090 131 5699 1089244 0.52 1094943 132 5807 1071294 0.54 1077101 133 5943 1049570 0.56 1055513 134 5607 1038520 0.54 1044127 135 4678 1004951 0.46 1009629 136 1629 924411 0.18 926040 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 44334 8101446 0.54 8145780 2 48386 8639082 0.56 8687468 3 41826 8693738 0.48 8735564 4 47113 8682370 0.54 8729483 5 42853 8631702 0.49 8674555 6 50990 8599417 0.59 8650407 7 45347 8536214 0.53 8581561 8 48782 8632887 0.56 8681669 9 42207 8549603 0.49 8591810 10 46983 8570297 0.55 8617280 11 41939 8522087 0.49 8564026 12 48964 8482890 0.57 8531854 13 44737 8518510 0.52 8563247 14 49666 8551153 0.58 8600819 15 43376 8527333 0.51 8570709 16 46354 8483886 0.54 8530240 17 42084 8560825 0.49 8602909 18 47598 8538653 0.55 8586251 19 44294 8564325 0.51 8608619 20 48253 8518613 0.56 8566866 21 43764 8452204 0.52 8495968 22 47099 8413701 0.56 8460800 23 40245 8443532 0.47 8483777 24 45052 8454958 0.53 8500010 25 41990 8470221 0.49 8512211 26 47058 8511879 0.55 8558937 27 43867 8548483 0.51 8592350 28 46358 8482427 0.54 8528785 29 40334 8492037 0.47 8532371 30 43244 8439831 0.51 8483075 31 39179 8398482 0.46 8437661 32 43727 8425388 0.52 8469115 33 41751 8368205 0.50 8409956 34 45498 8425488 0.54 8470986 35 40362 8436260 0.48 8476622 36 42199 8442679 0.50 8484878 37 38312 8384537 0.45 8422849 38 41518 8403716 0.49 8445234 39 39886 8370905 0.47 8410791 40 43402 8347942 0.52 8391344 41 40160 8349413 0.48 8389573 42 41437 8295436 0.50 8336873 43 37768 8289924 0.45 8327692 44 38802 8318542 0.46 8357344 45 37460 8324034 0.45 8361494 46 42061 8275469 0.51 8317530 47 39281 8278421 0.47 8317702 48 40632 8200167 0.49 8240799 49 36849 8229660 0.45 8266509 50 36958 8219875 0.45 8256833 51 35128 8201573 0.43 8236701 52 39129 8148036 0.48 8187165 53 37506 8147047 0.46 8184553 54 39629 8140397 0.48 8180026 55 36010 8083921 0.44 8119931 56 35903 8111430 0.44 8147333 57 34661 8106522 0.43 8141183 58 36136 8020555 0.45 8056691 59 35455 8052577 0.44 8088032 60 37509 7974168 0.47 8011677 61 34996 7902251 0.44 7937247 62 35032 7919440 0.44 7954472 63 33184 7843916 0.42 7877100 64 33239 7816729 0.42 7849968 65 32406 7820981 0.41 7853387 66 34677 7807413 0.44 7842090 67 33845 7778756 0.43 7812601 68 34056 7768781 0.44 7802837 69 31699 7683048 0.41 7714747 70 31771 7613230 0.42 7645001 71 30532 7605166 0.40 7635698 72 31992 7521994 0.42 7553986 73 31530 7483415 0.42 7514945 74 32997 7473210 0.44 7506207 75 30569 7389940 0.41 7420509 76 30580 7384890 0.41 7415470 77 28794 7340489 0.39 7369283 78 30236 7271842 0.41 7302078 79 30056 7243527 0.41 7273583 80 30590 7183930 0.42 7214520 81 29303 7100914 0.41 7130217 82 29260 7034806 0.41 7064066 83 27195 6967414 0.39 6994609 84 27399 6902140 0.40 6929539 85 26976 6862040 0.39 6889016 86 27739 6858142 0.40 6885881 87 27848 6788663 0.41 6816511 88 28009 6734601 0.41 6762610 89 26572 6697237 0.40 6723809 90 26369 6619832 0.40 6646201 91 25164 6578152 0.38 6603316 92 25863 6511001 0.40 6536864 93 25540 6422517 0.40 6448057 94 26389 6351682 0.41 6378071 95 24923 6297176 0.39 6322099 96 24653 6252004 0.39 6276657 97 23898 6234404 0.38 6258302 98 24122 6204360 0.39 6228482 99 23666 6138576 0.38 6162242 100 24435 6078820 0.40 6103255 101 24136 6002213 0.40 6026349 102 23607 5909385 0.40 5932992 103 22202 5823313 0.38 5845515 104 21745 5768683 0.38 5790428 105 21537 5697774 0.38 5719311 106 22382 5669153 0.39 5691535 107 22252 5636617 0.39 5658869 108 22041 5575682 0.39 5597723 109 21486 5538866 0.39 5560352 110 20915 5464969 0.38 5485884 111 20408 5395294 0.38 5415702 112 20895 5313294 0.39 5334189 113 20585 5249696 0.39 5270281 114 20966 5180735 0.40 5201701 115 20170 5102387 0.39 5122557 116 19939 5078279 0.39 5098218 117 19130 5028676 0.38 5047806 118 19727 4985572 0.39 5005299 119 19384 4934895 0.39 4954279 120 19980 4857293 0.41 4877273 121 19417 4800783 0.40 4820200 122 19343 4730471 0.41 4749814 123 18206 4648128 0.39 4666334 124 18329 4583541 0.40 4601870 125 18021 4520061 0.40 4538082 126 18796 4465751 0.42 4484547 127 18512 4418216 0.42 4436728 128 18757 4385706 0.43 4404463 129 18682 4334058 0.43 4352740 130 18923 4272052 0.44 4290975 131 19339 4221034 0.46 4240373 132 20446 4145782 0.49 4166228 133 21056 4074121 0.51 4095177 134 21309 4023537 0.53 4044846 135 16389 3944018 0.41 3960407 136 7818 3730668 0.21 3738486 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 77316 536721 12.59 614037 2 70437 484885 12.68 555322 3 69138 483832 12.50 552970 4 68302 477819 12.51 546121 5 69142 472800 12.76 541942 6 67632 479291 12.37 546923 7 68470 471798 12.67 540268 8 67038 460673 12.70 527711 9 66376 452971 12.78 519347 10 66214 445994 12.93 512208 11 64519 439447 12.80 503966 12 63826 430568 12.91 494394 13 62128 420489 12.87 482617 14 61407 420628 12.74 482035 15 61466 420412 12.76 481878 16 60228 410430 12.80 470658 17 59771 408398 12.77 468169 18 57388 398836 12.58 456224 19 57561 392296 12.80 449857 20 56405 385351 12.77 441756 21 55173 376716 12.77 431889 22 53534 368259 12.69 421793 23 52626 363373 12.65 415999 24 52240 357006 12.76 409246 25 51339 355252 12.63 406591 26 49724 352425 12.36 402149 27 49987 344831 12.66 394818 28 48159 339937 12.41 388096 29 47824 332935 12.56 380759 30 46696 325382 12.55 372078 31 45964 319459 12.58 365423 32 46092 318704 12.64 364796 33 44598 310732 12.55 355330 34 44030 303802 12.66 347832 35 43824 301970 12.67 345794 36 41875 293765 12.48 335640 37 41445 292965 12.39 334410 38 40242 286426 12.32 326668 39 40600 285290 12.46 325890 40 39965 277583 12.59 317548 41 39440 276254 12.49 315694 42 37973 268162 12.40 306135 43 38004 264991 12.54 302995 44 36687 259040 12.41 295727 45 35843 255616 12.30 291459 46 35069 249880 12.31 284949 47 34438 248527 12.17 282965 48 34136 241280 12.39 275416 49 33856 239628 12.38 273484 50 32360 232666 12.21 265026 51 32262 230113 12.30 262375 52 31194 226497 12.11 257691 53 30901 221326 12.25 252227 54 30589 219087 12.25 249676 55 29411 214522 12.06 243933 56 29830 212202 12.32 242032 57 28767 208937 12.10 237704 58 28197 204289 12.13 232486 59 27864 199677 12.25 227541 60 27292 196219 12.21 223511 61 27184 193744 12.30 220928 62 26602 192734 12.13 219336 63 26341 189734 12.19 216075 64 25586 182621 12.29 208207 65 24909 180939 12.10 205848 66 24872 177348 12.30 202220 67 23647 173861 11.97 197508 68 23310 171455 11.97 194765 69 23666 170039 12.22 193705 70 22854 165525 12.13 188379 71 22662 162576 12.23 185238 72 21919 159562 12.08 181481 73 22058 157458 12.29 179516 74 21545 155513 12.17 177058 75 20736 151775 12.02 172511 76 20222 148900 11.96 169122 77 19717 145963 11.90 165680 78 19799 143637 12.11 163436 79 19327 141753 12.00 161080 80 18949 138878 12.01 157827 81 18290 136426 11.82 154716 82 18051 132719 11.97 150770 83 17804 130295 12.02 148099 84 17773 130713 11.97 148486 85 17355 127246 12.00 144601 86 16884 125035 11.90 141919 87 16699 123749 11.89 140448 88 16480 120927 11.99 137407 89 15788 119611 11.66 135399 90 15540 116895 11.73 132435 91 15361 115629 11.73 130990 92 15191 112954 11.85 128145 93 15002 111953 11.82 126955 94 14697 108747 11.91 123444 95 14469 107965 11.82 122434 96 13951 105227 11.71 119178 97 13840 102684 11.88 116524 98 13583 102293 11.72 115876 99 13040 99561 11.58 112601 100 12888 98071 11.62 110959 101 12831 97269 11.65 110100 102 12436 94591 11.62 107027 103 12179 93372 11.54 105551 104 12044 92291 11.54 104335 105 11834 90144 11.60 101978 106 11401 88473 11.42 99874 107 11295 87602 11.42 98897 108 11102 84830 11.57 95932 109 10943 83963 11.53 94906 110 10622 81676 11.51 92298 111 10507 81401 11.43 91908 112 10224 79274 11.42 89498 113 9960 78567 11.25 88527 114 9782 76708 11.31 86490 115 9673 75200 11.40 84873 116 9489 74030 11.36 83519 117 9452 72293 11.56 81745 118 9110 71598 11.29 80708 119 9048 70381 11.39 79429 120 8700 68342 11.29 77042 121 8772 67318 11.53 76090 122 8240 65841 11.12 74081 123 8453 65471 11.43 73924 124 8297 63306 11.59 71603 125 7893 62842 11.16 70735 126 7701 61476 11.13 69177 127 7737 59945 11.43 67682 128 7336 59377 11.00 66713 129 7401 57954 11.32 65355 130 7053 57208 10.98 64261 131 6996 55747 11.15 62743 132 6928 54935 11.20 61863 133 6594 54255 10.84 60849 134 6482 52513 10.99 58995 135 5729 51000 10.10 56729 136 2809 43811 6.03 46620 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 4247 1004503 0.42 1008750 2 3528 833245 0.42 836773 3 3039 781275 0.39 784314 4 3038 770859 0.39 773897 5 2854 749560 0.38 752414 6 2890 724316 0.40 727206 7 2744 727327 0.38 730071 8 2795 727639 0.38 730434 9 2714 706636 0.38 709350 10 2788 714857 0.39 717645 11 2652 709733 0.37 712385 12 2610 697762 0.37 700372 13 2420 676398 0.36 678818 14 2443 666004 0.37 668447 15 2411 650377 0.37 652788 16 2360 646663 0.36 649023 17 2318 640993 0.36 643311 18 2246 625120 0.36 627366 19 2242 620156 0.36 622398 20 2175 609207 0.36 611382 21 2154 599458 0.36 601612 22 2082 592969 0.35 595051 23 2024 578426 0.35 580450 24 2089 570996 0.36 573085 25 2066 560463 0.37 562529 26 2013 556201 0.36 558214 27 1929 540083 0.36 542012 28 1951 529107 0.37 531058 29 1838 526034 0.35 527872 30 1830 512853 0.36 514683 31 1849 510534 0.36 512383 32 1738 501774 0.35 503512 33 1748 493400 0.35 495148 34 1665 487590 0.34 489255 35 1683 474009 0.35 475692 36 1606 467564 0.34 469170 37 1611 453664 0.35 455275 38 1596 452906 0.35 454502 39 1608 442594 0.36 444202 40 1541 438016 0.35 439557 41 1530 433071 0.35 434601 42 1472 431166 0.34 432638 43 1432 415869 0.34 417301 44 1496 412101 0.36 413597 45 1408 400956 0.35 402364 46 1338 391794 0.34 393132 47 1314 386069 0.34 387383 48 1355 381754 0.35 383109 49 1353 371465 0.36 372818 50 1289 373469 0.34 374758 51 1288 361946 0.35 363234 52 1278 359232 0.35 360510 53 1165 349528 0.33 350693 54 1185 344884 0.34 346069 55 1209 335443 0.36 336652 56 1126 331546 0.34 332672 57 1089 321856 0.34 322945 58 1062 319946 0.33 321008 59 1081 314438 0.34 315519 60 1072 312521 0.34 313593 61 1085 302458 0.36 303543 62 1055 303648 0.35 304703 63 983 294873 0.33 295856 64 1036 291103 0.35 292139 65 988 286584 0.34 287572 66 952 279972 0.34 280924 67 960 273576 0.35 274536 68 992 272498 0.36 273490 69 890 264201 0.34 265091 70 908 261449 0.35 262357 71 827 258029 0.32 258856 72 897 251845 0.35 252742 73 850 249323 0.34 250173 74 832 244355 0.34 245187 75 797 236066 0.34 236863 76 844 235635 0.36 236479 77 801 229721 0.35 230522 78 790 225179 0.35 225969 79 754 221489 0.34 222243 80 747 218968 0.34 219715 81 746 213583 0.35 214329 82 742 210787 0.35 211529 83 717 206879 0.35 207596 84 710 203524 0.35 204234 85 688 199895 0.34 200583 86 660 197911 0.33 198571 87 629 192251 0.33 192880 88 694 188875 0.37 189569 89 642 185688 0.34 186330 90 680 183061 0.37 183741 91 642 179038 0.36 179680 92 611 177346 0.34 177957 93 614 172850 0.35 173464 94 593 171433 0.34 172026 95 593 167538 0.35 168131 96 574 165084 0.35 165658 97 529 160825 0.33 161354 98 544 159563 0.34 160107 99 518 155526 0.33 156044 100 543 153984 0.35 154527 101 524 151068 0.35 151592 102 535 148718 0.36 149253 103 491 145661 0.34 146152 104 510 144105 0.35 144615 105 505 140453 0.36 140958 106 534 138219 0.38 138753 107 452 135801 0.33 136253 108 461 133150 0.35 133611 109 492 130482 0.38 130974 110 507 130123 0.39 130630 111 473 125613 0.38 126086 112 451 123587 0.36 124038 113 444 122137 0.36 122581 114 453 119883 0.38 120336 115 436 117078 0.37 117514 116 425 115883 0.37 116308 117 382 113983 0.33 114365 118 390 111175 0.35 111565 119 430 109687 0.39 110117 120 409 107641 0.38 108050 121 401 104152 0.38 104553 122 354 104181 0.34 104535 123 384 100356 0.38 100740 124 385 100020 0.38 100405 125 378 97715 0.39 98093 126 334 95889 0.35 96223 127 311 93429 0.33 93740 128 345 92273 0.37 92618 129 355 90609 0.39 90964 130 331 88640 0.37 88971 131 351 87632 0.40 87983 132 394 84615 0.46 85009 133 332 83463 0.40 83795 134 286 81770 0.35 82056 135 258 77055 0.33 77313 136 105 66735 0.16 66840 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 15269 3086108 0.49 3101377 2 15328 3223757 0.47 3239085 3 13527 3196854 0.42 3210381 4 14326 3140714 0.45 3155040 5 13631 3072249 0.44 3085880 6 14976 3017498 0.49 3032474 7 13605 2952493 0.46 2966098 8 13903 2947556 0.47 2961459 9 12179 2884847 0.42 2897026 10 12811 2866995 0.44 2879806 11 11454 2809606 0.41 2821060 12 12719 2762820 0.46 2775539 13 12204 2725263 0.45 2737467 14 12738 2689369 0.47 2702107 15 11168 2636980 0.42 2648148 16 11227 2580751 0.43 2591978 17 10532 2569295 0.41 2579827 18 10978 2525170 0.43 2536148 19 10842 2497886 0.43 2508728 20 11370 2453335 0.46 2464705 21 10313 2401171 0.43 2411484 22 10524 2365284 0.44 2375808 23 9020 2329262 0.39 2338282 24 9595 2297220 0.42 2306815 25 9321 2257066 0.41 2266387 26 9737 2226595 0.44 2236332 27 9365 2206018 0.42 2215383 28 9429 2158687 0.43 2168116 29 8309 2127570 0.39 2135879 30 8741 2089708 0.42 2098449 31 7779 2047149 0.38 2054928 32 8531 2027268 0.42 2035799 33 8224 1982176 0.41 1990400 34 8753 1965071 0.44 1973824 35 7620 1934433 0.39 1942053 36 7681 1899319 0.40 1907000 37 7078 1859072 0.38 1866150 38 7423 1835486 0.40 1842909 39 7193 1800085 0.40 1807278 40 7702 1771514 0.43 1779216 41 7376 1750621 0.42 1757997 42 7216 1716694 0.42 1723910 43 6539 1690420 0.39 1696959 44 6396 1672791 0.38 1679187 45 6243 1646663 0.38 1652906 46 6905 1607791 0.43 1614696 47 6718 1582021 0.42 1588739 48 6547 1547028 0.42 1553575 49 6038 1530027 0.39 1536065 50 5825 1509305 0.38 1515130 51 5547 1489115 0.37 1494662 52 6114 1461433 0.42 1467547 53 5840 1442631 0.40 1448471 54 6058 1420046 0.42 1426104 55 5544 1388366 0.40 1393910 56 5440 1371546 0.40 1376986 57 5117 1352722 0.38 1357839 58 5403 1319861 0.41 1325264 59 5183 1305278 0.40 1310461 60 5281 1278745 0.41 1284026 61 5023 1255239 0.40 1260262 62 4906 1243665 0.39 1248571 63 4689 1217139 0.38 1221828 64 4584 1197188 0.38 1201772 65 4441 1181554 0.37 1185995 66 4738 1160302 0.41 1165040 67 4553 1140864 0.40 1145417 68 4419 1124115 0.39 1128534 69 4161 1100624 0.38 1104785 70 4209 1080053 0.39 1084262 71 4062 1068100 0.38 1072162 72 4123 1048316 0.39 1052439 73 4022 1032718 0.39 1036740 74 4133 1019501 0.40 1023634 75 3724 995359 0.37 999083 76 3831 981939 0.39 985770 77 3513 963080 0.36 966593 78 3653 942693 0.39 946346 79 3453 934902 0.37 938355 80 3714 913487 0.40 917201 81 3555 898472 0.39 902027 82 3497 883849 0.39 887346 83 3225 868531 0.37 871756 84 3205 853651 0.37 856856 85 3220 838907 0.38 842127 86 3059 829583 0.37 832642 87 3124 811120 0.38 814244 88 3069 794282 0.38 797351 89 2803 783380 0.36 786183 90 2947 768556 0.38 771503 91 2726 757996 0.36 760722 92 2655 746410 0.35 749065 93 2732 731804 0.37 734536 94 2757 718249 0.38 721006 95 2616 706884 0.37 709500 96 2559 695266 0.37 697825 97 2480 684357 0.36 686837 98 2492 675890 0.37 678382 99 2334 660220 0.35 662554 100 2466 650631 0.38 653097 101 2419 638932 0.38 641351 102 2278 626970 0.36 629248 103 2164 615678 0.35 617842 104 2069 604379 0.34 606448 105 2118 592872 0.36 594990 106 2180 586102 0.37 588282 107 2134 575756 0.37 577890 108 2074 566375 0.36 568449 109 1958 558590 0.35 560548 110 1996 547592 0.36 549588 111 1940 536459 0.36 538399 112 1925 526535 0.36 528460 113 1912 518888 0.37 520800 114 1882 510153 0.37 512035 115 1763 499320 0.35 501083 116 1765 493731 0.36 495496 117 1783 483076 0.37 484859 118 1742 474595 0.37 476337 119 1732 467392 0.37 469124 120 1708 456913 0.37 458621 121 1639 450411 0.36 452050 122 1663 441750 0.38 443413 123 1662 433881 0.38 435543 124 1613 426477 0.38 428090 125 1542 417536 0.37 419078 126 1556 411195 0.38 412751 127 1555 404659 0.38 406214 128 1468 397805 0.37 399273 129 1485 390112 0.38 391597 130 1530 382049 0.40 383579 131 1471 374845 0.39 376316 132 1515 366442 0.41 367957 133 1513 357396 0.42 358909 134 1427 351629 0.40 353056 135 1160 342827 0.34 343987 136 629 307161 0.20 307790