CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 240492 1722448 12.25 1962940 2 223929 1593378 12.32 1817307 3 222049 1622039 12.04 1844088 4 224238 1634593 12.06 1858831 5 230006 1638457 12.31 1868463 6 230677 1682092 12.06 1912769 7 234699 1683359 12.24 1918058 8 235764 1671908 12.36 1907672 9 234677 1671899 12.31 1906576 10 238416 1669484 12.50 1907900 11 238274 1664875 12.52 1903149 12 235906 1658103 12.46 1894009 13 234723 1646921 12.47 1881644 14 237907 1683937 12.38 1921844 15 239440 1710085 12.28 1949525 16 240546 1704422 12.37 1944968 17 239424 1711229 12.27 1950653 18 238714 1706586 12.27 1945300 19 239959 1700051 12.37 1940010 20 238343 1690418 12.36 1928761 21 239044 1681198 12.45 1920242 22 236826 1673518 12.40 1910344 23 238258 1681574 12.41 1919832 24 237204 1675866 12.40 1913070 25 237310 1702077 12.24 1939387 26 238728 1715989 12.21 1954717 27 238693 1713218 12.23 1951911 28 238039 1702330 12.27 1940369 29 236618 1696667 12.24 1933285 30 236826 1687177 12.31 1924003 31 236673 1675787 12.38 1912460 32 241411 1696839 12.46 1938250 33 238859 1690664 12.38 1929523 34 237998 1681628 12.40 1919626 35 235912 1698464 12.20 1934376 36 235671 1686706 12.26 1922377 37 235641 1697164 12.19 1932805 38 236295 1689421 12.27 1925716 39 237763 1699634 12.27 1937397 40 237733 1689069 12.34 1926802 41 238492 1706469 12.26 1944961 42 235298 1683881 12.26 1919179 43 237948 1689906 12.34 1927854 44 234955 1681508 12.26 1916463 45 232911 1681438 12.17 1914349 46 230755 1670668 12.14 1901423 47 233700 1690470 12.15 1924170 48 232934 1674977 12.21 1907911 49 235770 1680409 12.30 1916179 50 231321 1663727 12.21 1895048 51 232500 1666669 12.24 1899169 52 229199 1664794 12.10 1893993 53 228112 1665160 12.05 1893272 54 229753 1664717 12.13 1894470 55 228252 1660644 12.08 1888896 56 231016 1666321 12.18 1897337 57 229766 1667763 12.11 1897529 58 226367 1658264 12.01 1884631 59 227883 1647492 12.15 1875375 60 224593 1643668 12.02 1868261 61 227124 1649751 12.10 1876875 62 227961 1658597 12.08 1886558 63 228565 1656753 12.12 1885318 64 225086 1637330 12.09 1862416 65 223960 1643946 11.99 1867906 66 224188 1642638 12.01 1866826 67 220554 1634653 11.89 1855207 68 220812 1632967 11.91 1853779 69 222443 1630109 12.01 1852552 70 220607 1611797 12.04 1832404 71 221760 1618462 12.05 1840222 72 219234 1606280 12.01 1825514 73 220971 1606665 12.09 1827636 74 219890 1614171 11.99 1834061 75 216124 1607093 11.85 1823217 76 215707 1597229 11.90 1812936 77 214522 1599896 11.82 1814418 78 214078 1589035 11.87 1803113 79 214943 1588349 11.92 1803292 80 214356 1581461 11.94 1795817 81 212133 1570607 11.90 1782740 82 210282 1566735 11.83 1777017 83 210023 1564863 11.83 1774886 84 210300 1572100 11.80 1782400 85 209945 1568006 11.81 1777951 86 208787 1567674 11.75 1776461 87 207783 1563025 11.73 1770808 88 207464 1551431 11.80 1758895 89 206066 1546817 11.76 1752883 90 204348 1538103 11.73 1742451 91 204328 1541452 11.70 1745780 92 202891 1530194 11.71 1733085 93 202844 1526166 11.73 1729010 94 201388 1516705 11.72 1718093 95 199031 1518247 11.59 1717278 96 198581 1511933 11.61 1710514 97 198620 1504028 11.67 1702648 98 198035 1500639 11.66 1698674 99 196359 1491535 11.63 1687894 100 196307 1485754 11.67 1682061 101 194921 1484738 11.60 1679659 102 192232 1465529 11.60 1657761 103 190097 1450761 11.59 1640858 104 188976 1454472 11.50 1643448 105 189393 1452472 11.54 1641865 106 187648 1442184 11.51 1629832 107 187114 1442758 11.48 1629872 108 185667 1425629 11.52 1611296 109 185859 1425560 11.53 1611419 110 183432 1411894 11.50 1595326 111 181912 1410902 11.42 1592814 112 181269 1394343 11.50 1575612 113 179176 1388627 11.43 1567803 114 178286 1377690 11.46 1555976 115 178305 1372143 11.50 1550448 116 175150 1365660 11.37 1540810 117 174991 1358441 11.41 1533432 118 173645 1347562 11.41 1521207 119 173211 1347119 11.39 1520330 120 170006 1328475 11.35 1498481 121 169616 1323866 11.36 1493482 122 167520 1309710 11.34 1477230 123 167831 1306034 11.39 1473865 124 165644 1291634 11.37 1457278 125 163829 1284067 11.31 1447896 126 160979 1274804 11.21 1435783 127 160244 1267938 11.22 1428182 128 159624 1263313 11.22 1422937 129 158442 1251825 11.23 1410267 130 157174 1239481 11.25 1396655 131 155751 1235850 11.19 1391601 132 154107 1220448 11.21 1374555 133 152807 1215709 11.17 1368516 134 149437 1201508 11.06 1350945 135 134045 1184621 10.17 1318666 136 65148 1120407 5.50 1185555 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 13275 3179505 0.42 3192780 2 11398 2689051 0.42 2700449 3 10169 2577944 0.39 2588113 4 10558 2588587 0.41 2599145 5 10364 2568838 0.40 2579202 6 10607 2528172 0.42 2538779 7 10232 2562193 0.40 2572425 8 10963 2611588 0.42 2622551 9 10528 2575643 0.41 2586171 10 10701 2623252 0.41 2633953 11 10741 2654760 0.40 2665501 12 10683 2638127 0.40 2648810 13 10248 2624241 0.39 2634489 14 10227 2624745 0.39 2634972 15 10490 2608824 0.40 2619314 16 10465 2644302 0.39 2654767 17 10511 2655163 0.39 2665674 18 10295 2629074 0.39 2639369 19 10686 2653435 0.40 2664121 20 10296 2637599 0.39 2647895 21 10395 2637991 0.39 2648386 22 10425 2650849 0.39 2661274 23 10287 2629061 0.39 2639348 24 10689 2642648 0.40 2653337 25 10438 2641618 0.39 2652056 26 10549 2657109 0.40 2667658 27 10507 2635581 0.40 2646088 28 10336 2627767 0.39 2638103 29 10467 2641137 0.39 2651604 30 10319 2615217 0.39 2625536 31 10385 2646300 0.39 2656685 32 10473 2636696 0.40 2647169 33 10478 2648106 0.39 2658584 34 10437 2645247 0.39 2655684 35 10317 2627657 0.39 2637974 36 10426 2637669 0.39 2648095 37 10166 2608535 0.39 2618701 38 10457 2636938 0.39 2647395 39 10353 2625830 0.39 2636183 40 10401 2633455 0.39 2643856 41 10332 2650536 0.39 2660868 42 10548 2657114 0.40 2667662 43 10441 2623599 0.40 2634040 44 10378 2624674 0.39 2635052 45 10261 2611596 0.39 2621857 46 10191 2605764 0.39 2615955 47 10202 2607193 0.39 2617395 48 10415 2622617 0.40 2633032 49 10028 2594322 0.39 2604350 50 10400 2630249 0.39 2640649 51 10201 2599060 0.39 2609261 52 10328 2607511 0.39 2617839 53 10254 2592400 0.39 2602654 54 10386 2590498 0.40 2600884 55 10127 2571364 0.39 2581491 56 10092 2586486 0.39 2596578 57 10156 2559683 0.40 2569839 58 10093 2572973 0.39 2583066 59 10306 2574172 0.40 2584478 60 10422 2595398 0.40 2605820 61 10136 2551903 0.40 2562039 62 10188 2585042 0.39 2595230 63 10230 2561626 0.40 2571856 64 10067 2567615 0.39 2577682 65 10202 2575701 0.39 2585903 66 10219 2555581 0.40 2565800 67 9930 2550642 0.39 2560572 68 10125 2566249 0.39 2576374 69 10070 2541686 0.39 2551756 70 10017 2547372 0.39 2557389 71 9876 2543359 0.39 2553235 72 10252 2527772 0.40 2538024 73 9973 2523519 0.39 2533492 74 9971 2514080 0.40 2524051 75 9967 2498670 0.40 2508637 76 9842 2498948 0.39 2508790 77 9823 2496077 0.39 2505900 78 9837 2491239 0.39 2501076 79 9740 2480895 0.39 2490635 80 9898 2483796 0.40 2493694 81 9750 2464767 0.39 2474517 82 9751 2462808 0.39 2472559 83 9589 2452308 0.39 2461897 84 9648 2450771 0.39 2460419 85 9710 2441520 0.40 2451230 86 9635 2451829 0.39 2461464 87 9715 2424629 0.40 2434344 88 9625 2430693 0.39 2440318 89 9712 2425058 0.40 2434770 90 9777 2421156 0.40 2430933 91 9448 2405219 0.39 2414667 92 9494 2395710 0.39 2405204 93 9544 2384755 0.40 2394299 94 9564 2387807 0.40 2397371 95 9432 2370915 0.40 2380347 96 9585 2361299 0.40 2370884 97 9480 2346071 0.40 2355551 98 9447 2355811 0.40 2365258 99 9365 2340051 0.40 2349416 100 9146 2330920 0.39 2340066 101 9273 2319505 0.40 2328778 102 9228 2308630 0.40 2317858 103 9188 2288852 0.40 2298040 104 9160 2290590 0.40 2299750 105 9006 2272247 0.39 2281253 106 9085 2264725 0.40 2273810 107 9025 2252884 0.40 2261909 108 9186 2247543 0.41 2256729 109 9196 2236615 0.41 2245811 110 9191 2238130 0.41 2247321 111 8994 2216063 0.40 2225057 112 9079 2200044 0.41 2209123 113 8912 2179760 0.41 2188672 114 8914 2171590 0.41 2180504 115 8837 2152685 0.41 2161522 116 8828 2153536 0.41 2162364 117 8893 2139948 0.41 2148841 118 8689 2131128 0.41 2139817 119 8875 2117976 0.42 2126851 120 8780 2106627 0.42 2115407 121 8718 2079172 0.42 2087890 122 8734 2077600 0.42 2086334 123 8592 2051071 0.42 2059663 124 8641 2044729 0.42 2053370 125 8533 2029465 0.42 2037998 126 8651 2011067 0.43 2019718 127 8541 1990397 0.43 1998938 128 8812 1988765 0.44 1997577 129 8686 1967633 0.44 1976319 130 8741 1958749 0.44 1967490 131 8856 1946867 0.45 1955723 132 8935 1928094 0.46 1937029 133 8434 1904946 0.44 1913380 134 8057 1894560 0.42 1902617 135 6781 1852755 0.36 1859536 136 2523 1733375 0.15 1735898 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 46279 9958988 0.46 10005267 2 48111 10537607 0.45 10585718 3 43933 10612378 0.41 10656311 4 47472 10583312 0.45 10630784 5 45577 10543001 0.43 10588578 6 49799 10489538 0.47 10539337 7 45630 10438342 0.44 10483972 8 47531 10539876 0.45 10587407 9 43407 10467127 0.41 10510534 10 46802 10536270 0.44 10583072 11 43972 10486768 0.42 10530740 12 47078 10463999 0.45 10511077 13 45064 10501104 0.43 10546168 14 47364 10525535 0.45 10572899 15 43869 10492835 0.42 10536704 16 46218 10454459 0.44 10500677 17 44259 10556669 0.42 10600928 18 47324 10541998 0.45 10589322 19 45007 10548361 0.42 10593368 20 46629 10520368 0.44 10566997 21 43796 10453313 0.42 10497109 22 46008 10426485 0.44 10472493 23 43042 10447846 0.41 10490888 24 45541 10475291 0.43 10520832 25 43787 10488029 0.42 10531816 26 46613 10518786 0.44 10565399 27 44667 10561419 0.42 10606086 28 46662 10512469 0.44 10559131 29 43592 10514207 0.41 10557799 30 45020 10483024 0.43 10528044 31 42483 10438934 0.41 10481417 32 44950 10484030 0.43 10528980 33 43701 10438267 0.42 10481968 34 46443 10490503 0.44 10536946 35 43582 10496101 0.41 10539683 36 44396 10499552 0.42 10543948 37 42170 10450170 0.40 10492340 38 44658 10473176 0.42 10517834 39 43200 10453933 0.41 10497133 40 45494 10441112 0.43 10486606 41 43552 10452976 0.41 10496528 42 44612 10400742 0.43 10445354 43 41936 10405265 0.40 10447201 44 43011 10452454 0.41 10495465 45 42181 10458676 0.40 10500857 46 45548 10425565 0.43 10471113 47 43604 10420149 0.42 10463753 48 44407 10355907 0.43 10400314 49 42044 10395329 0.40 10437373 50 42409 10400315 0.41 10442724 51 41285 10414881 0.39 10456166 52 44542 10393734 0.43 10438276 53 43156 10396134 0.41 10439290 54 44759 10388351 0.43 10433110 55 41351 10340222 0.40 10381573 56 42235 10382638 0.41 10424873 57 41249 10393189 0.40 10434438 58 42985 10331515 0.41 10374500 59 42324 10389846 0.41 10432170 60 43821 10349135 0.42 10392956 61 41596 10303819 0.40 10345415 62 41845 10349187 0.40 10391032 63 40213 10291326 0.39 10331539 64 41994 10281119 0.41 10323113 65 41660 10301110 0.40 10342770 66 43119 10310002 0.42 10353121 67 41398 10294531 0.40 10335929 68 41752 10320001 0.40 10361753 69 40356 10259917 0.39 10300273 70 41156 10217340 0.40 10258496 71 40720 10258379 0.40 10299099 72 41571 10198115 0.41 10239686 73 41102 10189109 0.40 10230211 74 41491 10205900 0.40 10247391 75 39775 10146014 0.39 10185789 76 40811 10158481 0.40 10199292 77 39836 10135142 0.39 10174978 78 40436 10089056 0.40 10129492 79 39945 10112389 0.39 10152334 80 40565 10089524 0.40 10130089 81 39815 10040215 0.39 10080030 82 40488 10007218 0.40 10047706 83 38937 9963571 0.39 10002508 84 39643 9924014 0.40 9963657 85 39010 9921049 0.39 9960059 86 39801 9929260 0.40 9969061 87 39121 9891030 0.39 9930151 88 39794 9855582 0.40 9895376 89 38696 9867654 0.39 9906350 90 38936 9822485 0.39 9861421 91 37697 9812836 0.38 9850533 92 38497 9784278 0.39 9822775 93 37931 9718530 0.39 9756461 94 39152 9662142 0.40 9701294 95 37917 9645841 0.39 9683758 96 37878 9614067 0.39 9651945 97 37227 9632797 0.38 9670024 98 37524 9628322 0.39 9665846 99 37302 9581427 0.39 9618729 100 38490 9550366 0.40 9588856 101 37475 9493702 0.39 9531177 102 37391 9429812 0.39 9467203 103 36239 9373291 0.39 9409530 104 35811 9324905 0.38 9360716 105 35994 9280233 0.39 9316227 106 36848 9277534 0.40 9314382 107 36794 9266267 0.40 9303061 108 36500 9209473 0.39 9245973 109 35670 9198288 0.39 9233958 110 35601 9139880 0.39 9175481 111 35058 9074042 0.38 9109100 112 36160 9017858 0.40 9054018 113 35402 8971916 0.39 9007318 114 35726 8917088 0.40 8952814 115 34488 8842670 0.39 8877158 116 34788 8839365 0.39 8874153 117 33927 8803004 0.38 8836931 118 34801 8754026 0.40 8788827 119 34652 8715517 0.40 8750169 120 34838 8640579 0.40 8675417 121 33879 8605248 0.39 8639127 122 33497 8539027 0.39 8572524 123 32892 8461565 0.39 8494457 124 33676 8397347 0.40 8431023 125 33456 8328567 0.40 8362023 126 33889 8270615 0.41 8304504 127 33415 8229592 0.40 8263007 128 33170 8202551 0.40 8235721 129 33001 8154257 0.40 8187258 130 33785 8073115 0.42 8106900 131 33918 8027211 0.42 8061129 132 34756 7937617 0.44 7972373 133 35263 7873203 0.45 7908466 134 34827 7818674 0.44 7853501 135 26995 7722509 0.35 7749504 136 14366 7387019 0.19 7401385 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 139243 1083150 11.39 1222393 2 126927 985964 11.41 1112891 3 124827 987880 11.22 1112707 4 124648 984859 11.23 1109507 5 126193 980362 11.40 1106555 6 125888 994671 11.23 1120559 7 126397 987155 11.35 1113552 8 124836 968406 11.42 1093242 9 123113 959592 11.37 1082705 10 123862 947657 11.56 1071519 11 122507 933772 11.60 1056279 12 120562 917534 11.61 1038096 13 117816 901281 11.56 1019097 14 117440 908160 11.45 1025600 15 117071 913992 11.35 1031063 16 115906 904579 11.36 1020485 17 114241 896891 11.30 1011132 18 111998 883230 11.25 995228 19 112452 868731 11.46 981183 20 110559 855338 11.45 965897 21 109393 841698 11.50 951091 22 106651 825939 11.44 932590 23 105193 815763 11.42 920956 24 104390 805014 11.48 909404 25 102879 809429 11.28 912308 26 102425 806746 11.27 909171 27 101115 796841 11.26 897956 28 99589 781556 11.30 881145 29 97833 769921 11.27 867754 30 97505 758855 11.39 856360 31 96320 743919 11.46 840239 32 95926 740157 11.47 836083 33 93845 728887 11.41 822732 34 91453 714618 11.35 806071 35 90196 714308 11.21 804504 36 89113 700271 11.29 789384 37 87924 697762 11.19 785686 38 87538 687516 11.29 775054 39 86486 683652 11.23 770138 40 85439 669644 11.32 755083 41 84592 667277 11.25 751869 42 82441 651624 11.23 734065 43 81730 644861 11.25 726591 44 80342 632755 11.27 713097 45 78782 623665 11.22 702447 46 77141 612681 11.18 689822 47 76383 611651 11.10 688034 48 75225 602638 11.10 677863 49 75104 595422 11.20 670526 50 73322 581967 11.19 655289 51 72336 575842 11.16 648178 52 70804 568260 11.08 639064 53 69517 558313 11.07 627830 54 69204 551099 11.16 620303 55 67408 544689 11.01 612097 56 66969 539040 11.05 606009 57 65738 531885 11.00 597623 58 65149 524046 11.06 589195 59 64093 514498 11.08 578591 60 62339 507269 10.94 569608 61 62902 502171 11.13 565073 62 61618 498260 11.01 559878 63 61533 490382 11.15 551915 64 59382 477356 11.06 536738 65 58301 473360 10.97 531661 66 57559 468155 10.95 525714 67 56265 458430 10.93 514695 68 55535 455058 10.88 510593 69 55380 449470 10.97 504850 70 54532 439374 11.04 493906 71 53564 437795 10.90 491359 72 52529 428344 10.92 480873 73 52618 423174 11.06 475792 74 51356 418421 10.93 469777 75 49586 410622 10.77 460208 76 49433 404010 10.90 453443 77 48014 398980 10.74 446994 78 47708 391080 10.87 438788 79 47296 388153 10.86 435449 80 46603 381658 10.88 428261 81 45887 376692 10.86 422579 82 44801 369329 10.82 414130 83 44439 364147 10.88 408586 84 43761 360930 10.81 404691 85 43752 356481 10.93 400233 86 42517 351623 10.79 394140 87 42167 346321 10.85 388488 88 41510 340587 10.86 382097 89 40190 334396 10.73 374586 90 39558 330204 10.70 369762 91 38967 329432 10.58 368399 92 38691 323210 10.69 361901 93 38504 317137 10.83 355641 94 36833 312276 10.55 349109 95 37031 310343 10.66 347374 96 36005 303070 10.62 339075 97 36075 297851 10.80 333926 98 34855 296145 10.53 331000 99 34569 289587 10.66 324156 100 33797 288065 10.50 321862 101 33797 284182 10.63 317979 102 33000 278299 10.60 311299 103 31957 272844 10.48 304801 104 31534 270440 10.44 301974 105 31738 267547 10.60 299285 106 30657 263008 10.44 293665 107 30412 259949 10.47 290361 108 29803 253622 10.52 283425 109 29533 252281 10.48 281814 110 28884 247403 10.45 276287 111 28581 243689 10.50 272270 112 27878 239964 10.41 267842 113 27295 237492 10.31 264787 114 27182 232705 10.46 259887 115 27169 229387 10.59 256556 116 26037 225843 10.34 251880 117 25957 222547 10.45 248504 118 25191 218873 10.32 244064 119 24915 216476 10.32 241391 120 24319 212702 10.26 237021 121 24394 209691 10.42 234085 122 23547 204601 10.32 228148 123 23334 203460 10.29 226794 124 22893 199916 10.27 222809 125 22528 197130 10.26 219658 126 22181 192953 10.31 215134 127 21828 190765 10.27 212593 128 21161 188580 10.09 209741 129 21120 185142 10.24 206262 130 20535 180769 10.20 201304 131 20266 178857 10.18 199123 132 19727 175514 10.10 195241 133 19436 173156 10.09 192592 134 18638 168387 9.97 187025 135 16712 164279 9.23 180991 136 8355 139348 5.66 147703 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 8473 2014719 0.42 2023192 2 6982 1671327 0.42 1678309 3 6268 1577335 0.40 1583603 4 6300 1564516 0.40 1570816 5 6144 1536145 0.40 1542289 6 6211 1490540 0.41 1496751 7 6025 1499431 0.40 1505456 8 6272 1513418 0.41 1519690 9 5917 1478940 0.40 1484857 10 6095 1490029 0.41 1496124 11 5931 1491859 0.40 1497790 12 5812 1466910 0.39 1472722 13 5633 1440971 0.39 1446604 14 5595 1426053 0.39 1431648 15 5492 1396240 0.39 1401732 16 5558 1395880 0.40 1401438 17 5410 1390404 0.39 1395814 18 5293 1361720 0.39 1367013 19 5281 1357600 0.39 1362881 20 5092 1338008 0.38 1343100 21 5224 1323071 0.39 1328295 22 4989 1313652 0.38 1318641 23 4942 1286471 0.38 1291413 24 4903 1275411 0.38 1280314 25 4780 1259652 0.38 1264432 26 4847 1247368 0.39 1252215 27 4679 1224518 0.38 1229197 28 4646 1207704 0.38 1212350 29 4737 1202428 0.39 1207165 30 4467 1179443 0.38 1183910 31 4390 1174840 0.37 1179230 32 4333 1159494 0.37 1163827 33 4396 1149732 0.38 1154128 34 4218 1133110 0.37 1137328 35 4035 1108386 0.36 1112421 36 4255 1099053 0.39 1103308 37 4126 1072867 0.38 1076993 38 4126 1071486 0.38 1075612 39 3961 1052856 0.37 1056817 40 4048 1045678 0.39 1049726 41 3942 1038455 0.38 1042397 42 3975 1030898 0.38 1034873 43 3862 1006778 0.38 1010640 44 3655 990516 0.37 994171 45 3649 974329 0.37 977978 46 3704 954952 0.39 958656 47 3556 945638 0.37 949194 48 3650 937354 0.39 941004 49 3553 918627 0.39 922180 50 3551 919385 0.38 922936 51 3431 899268 0.38 902699 52 3407 891851 0.38 895258 53 3346 876073 0.38 879419 54 3319 862235 0.38 865554 55 3222 848137 0.38 851359 56 3231 836922 0.38 840153 57 3171 817986 0.39 821157 58 3092 813488 0.38 816580 59 3101 801103 0.39 804204 60 2978 799398 0.37 802376 61 3017 776221 0.39 779238 62 2969 777408 0.38 780377 63 2946 761438 0.39 764384 64 2952 752222 0.39 755174 65 2929 744818 0.39 747747 66 2860 728235 0.39 731095 67 2662 718817 0.37 721479 68 2782 712628 0.39 715410 69 2680 698716 0.38 701396 70 2693 691333 0.39 694026 71 2636 683376 0.38 686012 72 2530 671457 0.38 673987 73 2500 663650 0.38 666150 74 2584 652480 0.39 655064 75 2411 637330 0.38 639741 76 2462 632722 0.39 635184 77 2386 620964 0.38 623350 78 2355 610862 0.38 613217 79 2362 604483 0.39 606845 80 2309 596898 0.39 599207 81 2190 586591 0.37 588781 82 2293 578635 0.39 580928 83 2227 568662 0.39 570889 84 2141 561761 0.38 563902 85 2136 555880 0.38 558016 86 2158 550325 0.39 552483 87 1975 537124 0.37 539099 88 2007 530332 0.38 532339 89 2016 524565 0.38 526581 90 1993 516693 0.38 518686 91 2033 507195 0.40 509228 92 1848 501832 0.37 503680 93 1938 491530 0.39 493468 94 1803 488819 0.37 490622 95 1781 481544 0.37 483325 96 1817 472823 0.38 474640 97 1790 464102 0.38 465892 98 1853 459835 0.40 461688 99 1759 451363 0.39 453122 100 1737 444912 0.39 446649 101 1712 440530 0.39 442242 102 1681 433139 0.39 434820 103 1621 427021 0.38 428642 104 1653 422467 0.39 424120 105 1616 414568 0.39 416184 106 1617 407887 0.39 409504 107 1611 402123 0.40 403734 108 1551 395727 0.39 397278 109 1520 391630 0.39 393150 110 1541 385747 0.40 387288 111 1516 377097 0.40 378613 112 1454 375257 0.39 376711 113 1414 367487 0.38 368901 114 1530 363000 0.42 364530 115 1400 355770 0.39 357170 116 1511 352127 0.43 353638 117 1425 345344 0.41 346769 118 1372 340623 0.40 341995 119 1361 335619 0.40 336980 120 1365 330066 0.41 331431 121 1372 323029 0.42 324401 122 1318 319697 0.41 321015 123 1372 312854 0.44 314226 124 1278 310063 0.41 311341 125 1270 305438 0.41 306708 126 1322 299947 0.44 301269 127 1272 294885 0.43 296157 128 1256 291752 0.43 293008 129 1184 285084 0.41 286268 130 1251 281286 0.44 282537 131 1277 276641 0.46 277918 132 1241 269598 0.46 270839 133 1223 265933 0.46 267156 134 1017 261959 0.39 262976 135 922 248346 0.37 249268 136 431 209538 0.21 209969 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 28072 6476438 0.43 6504510 2 27643 6785995 0.41 6813638 3 26255 6761743 0.39 6787998 4 26608 6669196 0.40 6695804 5 25995 6571159 0.39 6597154 6 26893 6476649 0.41 6503542 7 25451 6373055 0.40 6398506 8 25377 6377408 0.40 6402785 9 24054 6282786 0.38 6306840 10 24545 6275483 0.39 6300028 11 23289 6188282 0.37 6211571 12 23950 6112834 0.39 6136784 13 23104 6068653 0.38 6091757 14 23480 6015628 0.39 6039108 15 22210 5923006 0.37 5945216 16 22465 5838335 0.38 5860800 17 21897 5828775 0.37 5850672 18 22491 5760779 0.39 5783270 19 21990 5709457 0.38 5731447 20 21914 5638804 0.39 5660718 21 20744 5555255 0.37 5575999 22 20876 5488467 0.38 5509343 23 19996 5431800 0.37 5451796 24 20382 5379261 0.38 5399643 25 19711 5318484 0.37 5338195 26 20222 5258379 0.38 5278601 27 19437 5223875 0.37 5243312 28 19809 5143225 0.38 5163034 29 18837 5086424 0.37 5105261 30 19010 5020959 0.38 5039969 31 18118 4953305 0.36 4971423 32 18488 4916177 0.37 4934665 33 17704 4839476 0.36 4857180 34 18237 4801251 0.38 4819488 35 17225 4739210 0.36 4756435 36 17648 4677999 0.38 4695647 37 16707 4600755 0.36 4617462 38 17094 4550943 0.37 4568037 39 16515 4490151 0.37 4506666 40 16833 4434008 0.38 4450841 41 16328 4398342 0.37 4414670 42 16112 4329143 0.37 4345255 43 15403 4280068 0.36 4295471 44 15720 4244977 0.37 4260697 45 15262 4192551 0.36 4207813 46 15403 4118412 0.37 4133815 47 15097 4056840 0.37 4071937 48 14842 3981802 0.37 3996644 49 14528 3947071 0.37 3961599 50 14497 3906875 0.37 3921372 51 14003 3869504 0.36 3883507 52 14278 3822509 0.37 3836787 53 13874 3783694 0.37 3797568 54 13729 3732711 0.37 3746440 55 13354 3672815 0.36 3686169 56 13223 3625629 0.36 3638852 57 13120 3583659 0.36 3596779 58 13469 3516525 0.38 3529994 59 13025 3483856 0.37 3496881 60 12970 3432293 0.38 3445263 61 12389 3379207 0.37 3391596 62 12235 3362243 0.36 3374478 63 12001 3300669 0.36 3312670 64 12137 3258974 0.37 3271111 65 11885 3220955 0.37 3232840 66 11808 3179611 0.37 3191419 67 11324 3133583 0.36 3144907 68 11462 3097786 0.37 3109248 69 11174 3039855 0.37 3051029 70 11133 2995645 0.37 3006778 71 10893 2971481 0.37 2982374 72 10769 2922719 0.37 2933488 73 10423 2889785 0.36 2900208 74 10669 2859876 0.37 2870545 75 10298 2807704 0.37 2818002 76 10084 2775455 0.36 2785539 77 9895 2734744 0.36 2744639 78 10026 2682398 0.37 2692424 79 9656 2657667 0.36 2667323 80 9756 2620054 0.37 2629810 81 9354 2580267 0.36 2589621 82 9547 2544364 0.37 2553911 83 9357 2506498 0.37 2515855 84 9007 2469854 0.36 2478861 85 8942 2443525 0.36 2452467 86 8593 2414302 0.35 2422895 87 8565 2374690 0.36 2383255 88 8568 2332841 0.37 2341409 89 8466 2305583 0.37 2314049 90 8657 2271520 0.38 2280177 91 8338 2244445 0.37 2252783 92 8041 2218109 0.36 2226150 93 8023 2180518 0.37 2188541 94 8249 2148166 0.38 2156415 95 7745 2125734 0.36 2133479 96 7702 2089012 0.37 2096714 97 7590 2065823 0.37 2073413 98 7623 2041965 0.37 2049588 99 7387 2005343 0.37 2012730 100 7345 1981045 0.37 1988390 101 7293 1949691 0.37 1956984 102 7161 1921371 0.37 1928532 103 6993 1890618 0.37 1897611 104 6619 1863343 0.35 1869962 105 6712 1835804 0.36 1842516 106 6834 1816919 0.37 1823753 107 6659 1791507 0.37 1798166 108 6559 1760101 0.37 1766660 109 6557 1743009 0.37 1749566 110 6359 1711537 0.37 1717896 111 6180 1681005 0.37 1687185 112 6204 1660402 0.37 1666606 113 6243 1640650 0.38 1646893 114 6084 1617159 0.37 1623243 115 5990 1588232 0.38 1594222 116 5815 1568651 0.37 1574466 117 5900 1545511 0.38 1551411 118 5822 1522136 0.38 1527958 119 5916 1503756 0.39 1509672 120 5797 1476171 0.39 1481968 121 5482 1454658 0.38 1460140 122 5736 1428953 0.40 1434689 123 5556 1407309 0.39 1412865 124 5365 1386741 0.39 1392106 125 5453 1363939 0.40 1369392 126 5431 1344930 0.40 1350361 127 5373 1325072 0.40 1330445 128 5220 1310235 0.40 1315455 129 5191 1287306 0.40 1292497 130 5112 1263701 0.40 1268813 131 5272 1241197 0.42 1246469 132 5406 1216835 0.44 1222241 133 5190 1198355 0.43 1203545 134 5055 1174874 0.43 1179929 135 4109 1140795 0.36 1144904 136 2283 1008798 0.23 1011081