CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 210053 1473537 12.48 1683590 2 195035 1357793 12.56 1552828 3 193844 1383594 12.29 1577438 4 195282 1397079 12.26 1592361 5 199416 1400370 12.47 1599786 6 201351 1438735 12.28 1640086 7 204746 1440199 12.45 1644945 8 204255 1426870 12.52 1631125 9 204262 1427360 12.52 1631622 10 207438 1426187 12.70 1633625 11 206296 1422035 12.67 1628331 12 205811 1411298 12.73 1617109 13 204897 1403852 12.74 1608749 14 206579 1434166 12.59 1640745 15 209002 1459553 12.53 1668555 16 209158 1454861 12.57 1664019 17 208069 1460936 12.47 1669005 18 207460 1454807 12.48 1662267 19 210300 1449407 12.67 1659707 20 206989 1439651 12.57 1646640 21 207360 1433433 12.64 1640793 22 205936 1425379 12.62 1631315 23 206716 1437918 12.57 1644634 24 205892 1428469 12.60 1634361 25 207674 1457277 12.47 1664951 26 208418 1463692 12.46 1672110 27 208085 1462305 12.46 1670390 28 207505 1450269 12.52 1657774 29 205500 1448673 12.42 1654173 30 205835 1439357 12.51 1645192 31 205768 1432797 12.56 1638565 32 208893 1443472 12.64 1652365 33 208195 1442395 12.61 1650590 34 208519 1436035 12.68 1644554 35 204462 1444986 12.40 1649448 36 205886 1439903 12.51 1645789 37 205270 1449704 12.40 1654974 38 204979 1442729 12.44 1647708 39 207864 1450509 12.53 1658373 40 206880 1438974 12.57 1645854 41 207871 1455626 12.50 1663497 42 204575 1438868 12.45 1643443 43 206726 1441302 12.54 1648028 44 205481 1433031 12.54 1638512 45 202022 1435297 12.34 1637319 46 202197 1426252 12.42 1628449 47 202788 1443916 12.31 1646704 48 201816 1429017 12.38 1630833 49 205513 1434603 12.53 1640116 50 201751 1420682 12.44 1622433 51 203088 1419562 12.52 1622650 52 200957 1420847 12.39 1621804 53 197683 1421131 12.21 1618814 54 200491 1417017 12.40 1617508 55 198444 1418483 12.27 1616927 56 201459 1425294 12.38 1626753 57 201005 1422120 12.38 1623125 58 197085 1416650 12.21 1613735 59 198394 1405961 12.37 1604355 60 195685 1405314 12.22 1600999 61 197335 1410324 12.27 1607659 62 198905 1415720 12.32 1614625 63 198515 1416702 12.29 1615217 64 196811 1401802 12.31 1598613 65 195271 1404597 12.21 1599868 66 195194 1401646 12.22 1596840 67 193234 1395228 12.16 1588462 68 193688 1398676 12.16 1592364 69 194383 1393422 12.24 1587805 70 192243 1379910 12.23 1572153 71 193267 1384079 12.25 1577346 72 191157 1372105 12.23 1563262 73 192718 1374077 12.30 1566795 74 192414 1379306 12.24 1571720 75 189177 1375727 12.09 1564904 76 188592 1368247 12.11 1556839 77 187330 1368503 12.04 1555833 78 187451 1359166 12.12 1546617 79 188095 1361126 12.14 1549221 80 188504 1353643 12.22 1542147 81 184894 1346981 12.07 1531875 82 185256 1342762 12.12 1528018 83 183713 1339747 12.06 1523460 84 184578 1347077 12.05 1531655 85 184229 1343710 12.06 1527939 86 183576 1345126 12.01 1528702 87 181842 1339084 11.96 1520926 88 182394 1329894 12.06 1512288 89 180214 1325542 11.97 1505756 90 179650 1318632 11.99 1498282 91 179774 1323709 11.96 1503483 92 178829 1316106 11.96 1494935 93 179047 1308802 12.03 1487849 94 177048 1302017 11.97 1479065 95 175337 1303452 11.86 1478789 96 175277 1302446 11.86 1477723 97 176023 1294874 11.97 1470897 98 174520 1291690 11.90 1466210 99 172446 1284413 11.84 1456859 100 172388 1278196 11.88 1450584 101 171622 1279021 11.83 1450643 102 170203 1259292 11.91 1429495 103 167233 1255013 11.76 1422246 104 166445 1254213 11.72 1420658 105 167196 1251617 11.78 1418813 106 165831 1244664 11.76 1410495 107 165707 1244329 11.75 1410036 108 163755 1231763 11.73 1395518 109 163867 1231328 11.75 1395195 110 162724 1222221 11.75 1384945 111 161399 1216687 11.71 1378086 112 160792 1207371 11.75 1368163 113 159211 1199632 11.72 1358843 114 157408 1193722 11.65 1351130 115 156890 1189094 11.66 1345984 116 156320 1180319 11.70 1336639 117 155108 1178169 11.63 1333277 118 154252 1168051 11.67 1322303 119 154336 1167142 11.68 1321478 120 152049 1153311 11.65 1305360 121 150730 1149946 11.59 1300676 122 149598 1136322 11.63 1285920 123 149208 1132442 11.64 1281650 124 148138 1122198 11.66 1270336 125 145722 1119574 11.52 1265296 126 144701 1111546 11.52 1256247 127 143492 1102408 11.52 1245900 128 142374 1099739 11.46 1242113 129 142398 1091809 11.54 1234207 130 140289 1078735 11.51 1219024 131 140079 1076285 11.52 1216364 132 137993 1067387 11.45 1205380 133 137049 1060874 11.44 1197923 134 134370 1053120 11.32 1187490 135 120494 1035232 10.43 1155726 136 58892 971423 5.72 1030315 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 12594 2739844 0.46 2752438 2 10775 2323162 0.46 2333937 3 9681 2224611 0.43 2234292 4 9559 2231610 0.43 2241169 5 9382 2209554 0.42 2218936 6 9735 2180341 0.44 2190076 7 9456 2205241 0.43 2214697 8 9781 2252957 0.43 2262738 9 9431 2218508 0.42 2227939 10 9691 2265878 0.43 2275569 11 9731 2285413 0.42 2295144 12 9702 2272417 0.43 2282119 13 9179 2258904 0.40 2268083 14 9473 2260735 0.42 2270208 15 9326 2253205 0.41 2262531 16 9406 2276931 0.41 2286337 17 9399 2285380 0.41 2294779 18 9365 2268248 0.41 2277613 19 9316 2285897 0.41 2295213 20 9472 2275054 0.41 2284526 21 9353 2275773 0.41 2285126 22 9388 2284530 0.41 2293918 23 9258 2265941 0.41 2275199 24 9320 2276028 0.41 2285348 25 9178 2275524 0.40 2284702 26 9229 2294299 0.40 2303528 27 9231 2266242 0.41 2275473 28 9307 2264245 0.41 2273552 29 9325 2279689 0.41 2289014 30 9232 2254015 0.41 2263247 31 9248 2286341 0.40 2295589 32 9213 2277180 0.40 2286393 33 9343 2283307 0.41 2292650 34 9162 2281877 0.40 2291039 35 9078 2262622 0.40 2271700 36 9164 2275531 0.40 2284695 37 8883 2250037 0.39 2258920 38 9201 2274987 0.40 2284188 39 9286 2262932 0.41 2272218 40 9185 2274679 0.40 2283864 41 9234 2286429 0.40 2295663 42 9234 2289749 0.40 2298983 43 8991 2261028 0.40 2270019 44 9037 2264307 0.40 2273344 45 9048 2248305 0.40 2257353 46 9150 2248280 0.41 2257430 47 9257 2250439 0.41 2259696 48 9171 2264341 0.40 2273512 49 9225 2238732 0.41 2247957 50 9207 2268248 0.40 2277455 51 8965 2235580 0.40 2244545 52 9337 2252368 0.41 2261705 53 9186 2234055 0.41 2243241 54 9124 2234246 0.41 2243370 55 8785 2216572 0.39 2225357 56 8978 2234596 0.40 2243574 57 9159 2205895 0.41 2215054 58 8880 2221194 0.40 2230074 59 9056 2221759 0.41 2230815 60 9211 2238932 0.41 2248143 61 9031 2202926 0.41 2211957 62 8938 2234239 0.40 2243177 63 9091 2211306 0.41 2220397 64 9023 2218754 0.41 2227777 65 9081 2222829 0.41 2231910 66 9062 2209006 0.41 2218068 67 8885 2196968 0.40 2205853 68 8905 2216161 0.40 2225066 69 8846 2194788 0.40 2203634 70 8791 2199915 0.40 2208706 71 9061 2196456 0.41 2205517 72 8963 2185698 0.41 2194661 73 9022 2178177 0.41 2187199 74 8942 2174967 0.41 2183909 75 8799 2157283 0.41 2166082 76 8717 2164819 0.40 2173536 77 8578 2159069 0.40 2167647 78 8927 2154417 0.41 2163344 79 8963 2149243 0.42 2158206 80 8881 2151734 0.41 2160615 81 8901 2133095 0.42 2141996 82 8670 2135400 0.40 2144070 83 8663 2122491 0.41 2131154 84 8571 2123800 0.40 2132371 85 8607 2117216 0.40 2125823 86 8810 2122211 0.41 2131021 87 8447 2099336 0.40 2107783 88 8735 2109228 0.41 2117963 89 8753 2104288 0.41 2113041 90 8548 2101127 0.41 2109675 91 8544 2083587 0.41 2092131 92 8563 2079200 0.41 2087763 93 8721 2066743 0.42 2075464 94 8597 2069066 0.41 2077663 95 8378 2054949 0.41 2063327 96 8473 2056519 0.41 2064992 97 8386 2036584 0.41 2044970 98 8565 2051228 0.42 2059793 99 8451 2030584 0.41 2039035 100 8498 2026589 0.42 2035087 101 8425 2016012 0.42 2024437 102 8506 2008309 0.42 2016815 103 8272 1992268 0.41 2000540 104 8416 1997302 0.42 2005718 105 8223 1976101 0.41 1984324 106 8395 1973815 0.42 1982210 107 8324 1963226 0.42 1971550 108 8148 1957032 0.41 1965180 109 8179 1950694 0.42 1958873 110 8280 1951966 0.42 1960246 111 8156 1929112 0.42 1937268 112 8335 1924551 0.43 1932886 113 8106 1901306 0.42 1909412 114 8271 1897555 0.43 1905826 115 7939 1879071 0.42 1887010 116 8151 1884082 0.43 1892233 117 8226 1871251 0.44 1879477 118 7941 1859358 0.43 1867299 119 8166 1852318 0.44 1860484 120 8208 1844878 0.44 1853086 121 7919 1822242 0.43 1830161 122 7993 1820486 0.44 1828479 123 7996 1798071 0.44 1806067 124 7939 1793246 0.44 1801185 125 8040 1778311 0.45 1786351 126 8041 1764015 0.45 1772056 127 7879 1747940 0.45 1755819 128 8103 1746953 0.46 1755056 129 8200 1726352 0.47 1734552 130 8125 1718741 0.47 1726866 131 8378 1709593 0.49 1717971 132 8379 1699484 0.49 1707863 133 7943 1679119 0.47 1687062 134 7530 1670013 0.45 1677543 135 6509 1630527 0.40 1637036 136 2387 1514669 0.16 1517056 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 43109 8424383 0.51 8467492 2 45336 8924232 0.51 8969568 3 41574 8997865 0.46 9039439 4 45504 8971652 0.50 9017156 5 42457 8924220 0.47 8966677 6 46570 8889989 0.52 8936559 7 42063 8836206 0.47 8878269 8 44516 8929417 0.50 8973933 9 39788 8879268 0.45 8919056 10 43571 8932041 0.49 8975612 11 40128 8899773 0.45 8939901 12 43931 8868845 0.49 8912776 13 40908 8904419 0.46 8945327 14 44034 8924904 0.49 8968938 15 39863 8896632 0.45 8936495 16 42882 8862850 0.48 8905732 17 40390 8949291 0.45 8989681 18 43320 8945202 0.48 8988522 19 40759 8954786 0.45 8995545 20 43161 8924282 0.48 8967443 21 39827 8875299 0.45 8915126 22 42621 8849701 0.48 8892322 23 38494 8870318 0.43 8908812 24 41676 8892570 0.47 8934246 25 39099 8906746 0.44 8945845 26 42728 8926712 0.48 8969440 27 40491 8959221 0.45 8999712 28 42615 8926455 0.48 8969070 29 38955 8927556 0.43 8966511 30 41200 8899406 0.46 8940606 31 38036 8870362 0.43 8908398 32 41103 8906292 0.46 8947395 33 39783 8866809 0.45 8906592 34 42451 8910808 0.47 8953259 35 39072 8915914 0.44 8954986 36 40426 8915935 0.45 8956361 37 37674 8882442 0.42 8920116 38 40784 8902882 0.46 8943666 39 39182 8881559 0.44 8920741 40 41420 8870846 0.46 8912266 41 39396 8877052 0.44 8916448 42 40559 8836765 0.46 8877324 43 37710 8846931 0.42 8884641 44 39440 8880218 0.44 8919658 45 37743 8891717 0.42 8929460 46 41717 8847329 0.47 8889046 47 39121 8858698 0.44 8897819 48 40289 8803878 0.46 8844167 49 37626 8828612 0.42 8866238 50 38790 8849760 0.44 8888550 51 37050 8856122 0.42 8893172 52 40868 8837537 0.46 8878405 53 38452 8847598 0.43 8886050 54 40859 8840783 0.46 8881642 55 37563 8803485 0.42 8841048 56 38304 8831403 0.43 8869707 57 37013 8841924 0.42 8878937 58 39766 8796771 0.45 8836537 59 38398 8845312 0.43 8883710 60 40061 8812466 0.45 8852527 61 37113 8768096 0.42 8805209 62 38448 8811250 0.43 8849698 63 36891 8757488 0.42 8794379 64 38223 8753193 0.43 8791416 65 37171 8769003 0.42 8806174 66 39632 8781730 0.45 8821362 67 36997 8766344 0.42 8803341 68 38188 8790534 0.43 8828722 69 36164 8740663 0.41 8776827 70 37850 8713006 0.43 8750856 71 36544 8745105 0.42 8781649 72 38018 8701818 0.43 8739836 73 37118 8697210 0.42 8734328 74 38401 8701593 0.44 8739994 75 36095 8651570 0.42 8687665 76 37279 8666409 0.43 8703688 77 35922 8654932 0.41 8690854 78 37367 8610745 0.43 8648112 79 36472 8626995 0.42 8663467 80 37279 8608181 0.43 8645460 81 35825 8571909 0.42 8607734 82 37162 8554097 0.43 8591259 83 35042 8515186 0.41 8550228 84 36558 8484140 0.43 8520698 85 35329 8474892 0.42 8510221 86 36083 8485485 0.42 8521568 87 35398 8453653 0.42 8489051 88 36969 8432650 0.44 8469619 89 34776 8435263 0.41 8470039 90 36259 8398340 0.43 8434599 91 34280 8396123 0.41 8430403 92 35148 8367673 0.42 8402821 93 34855 8317294 0.42 8352149 94 35963 8281884 0.43 8317847 95 34676 8258931 0.42 8293607 96 35117 8237702 0.42 8272819 97 33397 8248545 0.40 8281942 98 34625 8248229 0.42 8282854 99 33961 8210263 0.41 8244224 100 35785 8183320 0.44 8219105 101 34202 8144518 0.42 8178720 102 34604 8095248 0.43 8129852 103 32737 8049642 0.41 8082379 104 33207 8006127 0.41 8039334 105 32452 7973182 0.41 8005634 106 34107 7968533 0.43 8002640 107 33468 7961651 0.42 7995119 108 33782 7920207 0.42 7953989 109 33028 7908009 0.42 7941037 110 32652 7861843 0.41 7894495 111 31889 7817272 0.41 7849161 112 33194 7768258 0.43 7801452 113 32859 7732709 0.42 7765568 114 33475 7683868 0.43 7717343 115 32071 7620806 0.42 7652877 116 31969 7623074 0.42 7655043 117 31095 7589689 0.41 7620784 118 32373 7551985 0.43 7584358 119 32395 7522810 0.43 7555205 120 32469 7456981 0.43 7489450 121 31955 7434798 0.43 7466753 122 31267 7376016 0.42 7407283 123 30686 7312763 0.42 7343449 124 31164 7267971 0.43 7299135 125 31041 7207614 0.43 7238655 126 31386 7166533 0.44 7197919 127 31153 7130125 0.44 7161278 128 31344 7113273 0.44 7144617 129 31180 7065237 0.44 7096417 130 31908 7005399 0.45 7037307 131 31384 6958610 0.45 6989994 132 32599 6894834 0.47 6927433 133 33152 6837655 0.48 6870807 134 33325 6799058 0.49 6832383 135 25793 6712097 0.38 6737890 136 13511 6392994 0.21 6406505 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 126872 959565 11.68 1086437 2 116091 871447 11.76 987538 3 113846 877153 11.49 990999 4 113416 872034 11.51 985450 5 115852 870582 11.74 986434 6 115497 884470 11.55 999967 7 115238 875926 11.63 991164 8 114140 860789 11.71 974929 9 112797 851703 11.69 964500 10 113606 843589 11.87 957195 11 112384 830611 11.92 942995 12 109582 814253 11.86 923835 13 108210 801199 11.90 909409 14 107720 808244 11.76 915964 15 107520 815303 11.65 922823 16 106488 803741 11.70 910229 17 104960 800449 11.59 905409 18 103780 789612 11.62 893392 19 104335 779139 11.81 883474 20 101742 765118 11.74 866860 21 100050 751331 11.75 851381 22 98266 739075 11.74 837341 23 97005 734078 11.67 831083 24 96331 722841 11.76 819172 25 95361 726719 11.60 822080 26 95155 724145 11.61 819300 27 93659 715866 11.57 809525 28 92352 703252 11.61 795604 29 91265 695104 11.61 786369 30 89282 681208 11.59 770490 31 88837 669567 11.71 758404 32 89305 667110 11.81 756415 33 86942 656506 11.69 743448 34 85714 646433 11.71 732147 35 84232 642379 11.59 726611 36 82312 633971 11.49 716283 37 81914 633266 11.45 715180 38 81017 621391 11.53 702408 39 81176 619324 11.59 700500 40 79496 606542 11.59 686038 41 79394 603108 11.63 682502 42 77116 590701 11.55 667817 43 76960 582306 11.67 659266 44 75183 572679 11.60 647862 45 73076 567938 11.40 641014 46 72856 555652 11.59 628508 47 72308 555952 11.51 628260 48 71200 547397 11.51 618597 49 70701 542630 11.53 613331 50 68878 529067 11.52 597945 51 68631 523032 11.60 591663 52 67309 517307 11.51 584616 53 65426 510837 11.35 576263 54 65954 501968 11.61 567922 55 63910 497253 11.39 561163 56 63649 492718 11.44 556367 57 62766 485888 11.44 548654 58 61176 480825 11.29 542001 59 60382 471394 11.35 531776 60 59350 463870 11.34 523220 61 59091 460991 11.36 520082 62 58791 456872 11.40 515663 63 58068 450480 11.42 508548 64 56622 438097 11.45 494719 65 55788 435238 11.36 491026 66 54507 428785 11.28 483292 67 53153 422433 11.18 475586 68 52920 417303 11.25 470223 69 52569 413142 11.29 465711 70 52057 407010 11.34 459067 71 51382 401625 11.34 453007 72 50065 393690 11.28 443755 73 49827 389025 11.35 438852 74 49401 386252 11.34 435653 75 47528 378966 11.14 426494 76 47120 373731 11.20 420851 77 46580 369175 11.20 415755 78 45798 362594 11.21 408392 79 45368 361626 11.15 406994 80 45011 353806 11.29 398817 81 43511 348551 11.10 392062 82 43418 343750 11.21 387168 83 42059 340403 11.00 382462 84 42369 335658 11.21 378027 85 41609 332121 11.13 373730 86 40871 328376 11.07 369247 87 40184 323484 11.05 363668 88 39482 317753 11.05 357235 89 38827 313396 11.02 352223 90 38431 308264 11.08 346695 91 38047 307102 11.02 345149 92 37174 301985 10.96 339159 93 37448 296154 11.23 333602 94 35923 292082 10.95 328005 95 35722 289203 10.99 324925 96 34714 284110 10.89 318824 97 34532 280469 10.96 315001 98 34279 279093 10.94 313372 99 33403 272291 10.93 305694 100 33403 270059 11.01 303462 101 32823 267612 10.93 300435 102 32264 262347 10.95 294611 103 31486 257805 10.88 289291 104 31034 255118 10.85 286152 105 30875 252047 10.91 282922 106 30429 247873 10.93 278302 107 29524 244610 10.77 274134 108 29267 240100 10.87 269367 109 28781 238618 10.76 267399 110 28331 233320 10.83 261651 111 27647 230793 10.70 258440 112 27478 227791 10.76 255269 113 26937 224296 10.72 251233 114 26786 221513 10.79 248299 115 26407 218780 10.77 245187 116 25684 214652 10.69 240336 117 25583 212064 10.77 237647 118 24902 208646 10.66 233548 119 25032 205832 10.84 230864 120 24312 201494 10.77 225806 121 24170 199927 10.79 224097 122 23458 195319 10.72 218777 123 23383 194023 10.76 217406 124 22916 190908 10.72 213824 125 22237 187998 10.58 210235 126 22042 184793 10.66 206835 127 21572 182155 10.59 203727 128 21273 180510 10.54 201783 129 21084 177675 10.61 198759 130 20688 174313 10.61 195001 131 20481 172239 10.63 192720 132 19802 169590 10.46 189392 133 19326 166648 10.39 185974 134 18922 162639 10.42 181561 135 16833 158795 9.58 175628 136 8562 137049 5.88 145611 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 8243 1790580 0.46 1798823 2 7130 1494593 0.47 1501723 3 6254 1409037 0.44 1415291 4 6069 1398763 0.43 1404832 5 5969 1371894 0.43 1377863 6 5907 1335763 0.44 1341670 7 5940 1345131 0.44 1351071 8 5706 1356927 0.42 1362633 9 5588 1324519 0.42 1330107 10 5745 1339900 0.43 1345645 11 5504 1338725 0.41 1344229 12 5540 1317351 0.42 1322891 13 5150 1294460 0.40 1299610 14 5278 1282026 0.41 1287304 15 5290 1257532 0.42 1262822 16 5236 1257598 0.41 1262834 17 5054 1251104 0.40 1256158 18 4971 1227087 0.40 1232058 19 4870 1224299 0.40 1229169 20 4937 1208218 0.41 1213155 21 4800 1195814 0.40 1200614 22 4854 1184770 0.41 1189624 23 4656 1161919 0.40 1166575 24 4539 1153940 0.39 1158479 25 4532 1144184 0.39 1148716 26 4492 1132012 0.40 1136504 27 4460 1108317 0.40 1112777 28 4488 1094722 0.41 1099210 29 4234 1091306 0.39 1095540 30 4404 1069518 0.41 1073922 31 4292 1068757 0.40 1073049 32 4193 1053813 0.40 1058006 33 4137 1043995 0.39 1048132 34 4184 1029508 0.40 1033692 35 3939 1008371 0.39 1012310 36 3833 1001379 0.38 1005212 37 3853 980259 0.39 984112 38 3799 976125 0.39 979924 39 3805 963675 0.39 967480 40 3780 954711 0.39 958491 41 3841 951025 0.40 954866 42 3691 944028 0.39 947719 43 3584 919796 0.39 923380 44 3412 909188 0.37 912600 45 3482 892049 0.39 895531 46 3444 876773 0.39 880217 47 3532 867166 0.41 870698 48 3378 860869 0.39 864247 49 3364 844099 0.40 847463 50 3232 846109 0.38 849341 51 3248 826370 0.39 829618 52 3199 822517 0.39 825716 53 3041 806011 0.38 809052 54 3233 794867 0.41 798100 55 3002 780114 0.38 783116 56 2980 773328 0.38 776308 57 2938 755032 0.39 757970 58 3009 752031 0.40 755040 59 3026 741792 0.41 744818 60 3070 740134 0.41 743204 61 2815 720879 0.39 723694 62 2787 721913 0.38 724700 63 2743 706367 0.39 709110 64 2731 697646 0.39 700377 65 2710 692425 0.39 695135 66 2745 677829 0.40 680574 67 2606 666170 0.39 668776 68 2548 663158 0.38 665706 69 2654 650980 0.41 653634 70 2503 642444 0.39 644947 71 2477 636883 0.39 639360 72 2423 626423 0.39 628846 73 2457 617560 0.40 620017 74 2400 608646 0.39 611046 75 2223 596026 0.37 598249 76 2393 590815 0.40 593208 77 2295 579409 0.39 581704 78 2227 571358 0.39 573585 79 2208 566252 0.39 568460 80 2284 560242 0.41 562526 81 2329 550254 0.42 552583 82 2157 542957 0.40 545114 83 2104 534751 0.39 536855 84 2062 528355 0.39 530417 85 2078 521172 0.40 523250 86 2164 518641 0.42 520805 87 2046 503923 0.40 505969 88 1962 500448 0.39 502410 89 1939 493764 0.39 495703 90 1910 488683 0.39 490593 91 1866 479420 0.39 481286 92 1905 474065 0.40 475970 93 1893 466683 0.40 468576 94 1826 462973 0.39 464799 95 1824 454665 0.40 456489 96 1766 449098 0.39 450864 97 1792 439116 0.41 440908 98 1867 436947 0.43 438814 99 1727 428595 0.40 430322 100 1729 423484 0.41 425213 101 1680 417291 0.40 418971 102 1634 412717 0.39 414351 103 1633 405651 0.40 407284 104 1633 401917 0.40 403550 105 1555 394532 0.39 396087 106 1533 391176 0.39 392709 107 1542 384422 0.40 385964 108 1503 378015 0.40 379518 109 1609 372409 0.43 374018 110 1496 369246 0.40 370742 111 1476 361404 0.41 362880 112 1470 357026 0.41 358496 113 1486 352770 0.42 354256 114 1458 348366 0.42 349824 115 1454 342208 0.42 343662 116 1465 337448 0.43 338913 117 1380 331669 0.41 333049 118 1406 327463 0.43 328869 119 1368 322942 0.42 324310 120 1308 318883 0.41 320191 121 1349 311779 0.43 313128 122 1324 306754 0.43 308078 123 1306 300983 0.43 302289 124 1235 299694 0.41 300929 125 1253 295514 0.42 296767 126 1257 290762 0.43 292019 127 1254 285399 0.44 286653 128 1234 282589 0.43 283823 129 1200 277069 0.43 278269 130 1253 271543 0.46 272796 131 1221 269005 0.45 270226 132 1183 264381 0.45 265564 133 1085 258850 0.42 259935 134 1018 255844 0.40 256862 135 870 242862 0.36 243732 136 393 208658 0.19 209051 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 27540 5665118 0.48 5692658 2 27236 5936661 0.46 5963897 3 26093 5925714 0.44 5951807 4 26422 5851496 0.45 5877918 5 25515 5758720 0.44 5784235 6 26119 5679213 0.46 5705332 7 24644 5598152 0.44 5622796 8 24625 5605046 0.44 5629671 9 22995 5526170 0.41 5549165 10 23877 5524320 0.43 5548197 11 22428 5457167 0.41 5479595 12 22786 5389394 0.42 5412180 13 22228 5354603 0.41 5376831 14 22435 5310286 0.42 5332721 15 21478 5237209 0.41 5258687 16 21937 5159165 0.42 5181102 17 21032 5154927 0.41 5175959 18 21503 5098523 0.42 5120026 19 20823 5060610 0.41 5081433 20 20639 4998698 0.41 5019337 21 19777 4935876 0.40 4955653 22 20205 4870475 0.41 4890680 23 18868 4830735 0.39 4849603 24 19282 4786751 0.40 4806033 25 18715 4738303 0.39 4757018 26 19130 4688347 0.41 4707477 27 18560 4655496 0.40 4674056 28 18878 4585756 0.41 4604634 29 17783 4543454 0.39 4561237 30 18045 4485257 0.40 4503302 31 16949 4422925 0.38 4439874 32 17601 4402181 0.40 4419782 33 16914 4330631 0.39 4347545 34 17529 4298785 0.41 4316314 35 16593 4247527 0.39 4264120 36 16674 4193899 0.40 4210573 37 15923 4132058 0.38 4147981 38 16010 4086221 0.39 4102231 39 15784 4034855 0.39 4050639 40 15947 3989430 0.40 4005377 41 15476 3953799 0.39 3969275 42 15449 3891954 0.40 3907403 43 14806 3859442 0.38 3874248 44 14775 3828908 0.38 3843683 45 14716 3778089 0.39 3792805 46 14985 3716149 0.40 3731134 47 14208 3667446 0.39 3681654 48 14480 3604892 0.40 3619372 49 13878 3570520 0.39 3584398 50 13669 3538212 0.38 3551881 51 13459 3504947 0.38 3518406 52 13876 3466413 0.40 3480289 53 13434 3432053 0.39 3445487 54 13699 3385185 0.40 3398884 55 12681 3332073 0.38 3344754 56 12555 3296768 0.38 3309323 57 12400 3258271 0.38 3270671 58 12572 3201269 0.39 3213841 59 12506 3177867 0.39 3190373 60 12607 3130088 0.40 3142695 61 11865 3082368 0.38 3094233 62 11831 3064715 0.38 3076546 63 11628 3018185 0.38 3029813 64 11853 2979595 0.40 2991448 65 11263 2945837 0.38 2957100 66 11561 2914461 0.40 2926022 67 11185 2869460 0.39 2880645 68 10875 2839097 0.38 2849972 69 10693 2787557 0.38 2798250 70 11058 2747381 0.40 2758439 71 10388 2728326 0.38 2738714 72 10703 2686464 0.40 2697167 73 10210 2659405 0.38 2669615 74 10411 2631443 0.39 2641854 75 9950 2585319 0.38 2595269 76 9916 2554248 0.39 2564164 77 9681 2519955 0.38 2529636 78 9838 2475253 0.40 2485091 79 9620 2452601 0.39 2462221 80 9576 2418991 0.39 2428567 81 9274 2385854 0.39 2395128 82 9309 2353741 0.39 2363050 83 8853 2318075 0.38 2326928 84 8968 2288567 0.39 2297535 85 8797 2264088 0.39 2272885 86 8700 2237589 0.39 2246289 87 8599 2202496 0.39 2211095 88 8680 2169380 0.40 2178060 89 8262 2142005 0.38 2150267 90 8300 2111845 0.39 2120145 91 8038 2090074 0.38 2098112 92 8067 2061891 0.39 2069958 93 8083 2029685 0.40 2037768 94 7917 2000922 0.39 2008839 95 7653 1979052 0.39 1986705 96 7664 1950831 0.39 1958495 97 7470 1929733 0.39 1937203 98 7456 1905778 0.39 1913234 99 7267 1875901 0.39 1883168 100 7279 1853741 0.39 1861020 101 7207 1824266 0.39 1831473 102 7037 1796535 0.39 1803572 103 6966 1770591 0.39 1777557 104 6797 1746207 0.39 1753004 105 6793 1721285 0.39 1728078 106 6849 1704993 0.40 1711842 107 6669 1683089 0.39 1689758 108 6445 1658851 0.39 1665296 109 6514 1641261 0.40 1647775 110 6216 1612592 0.38 1618808 111 6286 1583535 0.40 1589821 112 6136 1564530 0.39 1570666 113 6078 1547526 0.39 1553604 114 6215 1524802 0.41 1531017 115 5970 1499347 0.40 1505317 116 5817 1483507 0.39 1489324 117 5966 1463379 0.41 1469345 118 6005 1441841 0.41 1447846 119 5776 1423240 0.40 1429016 120 5646 1397540 0.40 1403186 121 5692 1379993 0.41 1385685 122 5613 1355815 0.41 1361428 123 5705 1334714 0.43 1340419 124 5578 1318233 0.42 1323811 125 5228 1297856 0.40 1303084 126 5485 1281800 0.43 1287285 127 5167 1260478 0.41 1265645 128 5067 1244275 0.41 1249342 129 5045 1226511 0.41 1231556 130 5157 1202810 0.43 1207967 131 5211 1186797 0.44 1192008 132 5212 1163005 0.45 1168217 133 5295 1145007 0.46 1150302 134 5000 1126720 0.44 1131720 135 4002 1100571 0.36 1104573 136 2290 985624 0.23 987914