CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 416129 3105026 11.82 3521155 2 388237 2863078 11.94 3251315 3 385877 2916115 11.69 3301992 4 389915 2941618 11.70 3331533 5 395759 2940679 11.86 3336438 6 398168 3021728 11.64 3419896 7 406866 3022856 11.86 3429722 8 407247 2999604 11.95 3406851 9 407503 3002091 11.95 3409594 10 411249 3005190 12.04 3416439 11 413593 2999432 12.12 3413025 12 410835 2983060 12.11 3393895 13 409099 2964258 12.13 3373357 14 413809 3027973 12.02 3441782 15 415189 3076956 11.89 3492145 16 418844 3054386 12.06 3473230 17 415592 3075288 11.91 3490880 18 413954 3058894 11.92 3472848 19 417086 3049813 12.03 3466899 20 416181 3037950 12.05 3454131 21 415590 3023543 12.08 3439133 22 412757 3015479 12.04 3428236 23 412941 3031299 11.99 3444240 24 410485 3016095 11.98 3426580 25 413018 3061138 11.89 3474156 26 415175 3081326 11.87 3496501 27 414219 3075800 11.87 3490019 28 413406 3051137 11.93 3464543 29 410543 3050270 11.86 3460813 30 411011 3032485 11.94 3443496 31 410543 3016359 11.98 3426902 32 418517 3057372 12.04 3475889 33 413959 3043777 11.97 3457736 34 412246 3033912 11.96 3446158 35 410193 3056301 11.83 3466494 36 407646 3034682 11.84 3442328 37 408449 3050580 11.81 3459029 38 407470 3034410 11.84 3441880 39 414468 3050732 11.96 3465200 40 410297 3032423 11.92 3442720 41 414496 3070957 11.89 3485453 42 405785 3029171 11.81 3434956 43 411843 3045512 11.91 3457355 44 408086 3027936 11.88 3436022 45 403485 3026581 11.76 3430066 46 401265 3005388 11.78 3406653 47 402616 3038871 11.70 3441487 48 402236 3006331 11.80 3408567 49 406964 3015069 11.89 3422033 50 399003 2981765 11.80 3380768 51 402681 2995432 11.85 3398113 52 396390 2990573 11.70 3386963 53 393709 2985548 11.65 3379257 54 397768 2992290 11.73 3390058 55 392751 2984139 11.63 3376890 56 398084 2996057 11.73 3394141 57 397086 2989783 11.72 3386869 58 391321 2972374 11.63 3363695 59 392271 2950599 11.73 3342870 60 387959 2946057 11.64 3334016 61 391289 2965932 11.66 3357221 62 395358 2979248 11.72 3374606 63 393785 2971180 11.70 3364965 64 390532 2939749 11.73 3330281 65 387703 2950949 11.61 3338652 66 385976 2945651 11.59 3331627 67 382588 2926929 11.56 3309517 68 382120 2922575 11.56 3304695 69 384038 2922448 11.61 3306486 70 379093 2888422 11.60 3267515 71 381793 2894582 11.65 3276375 72 377093 2869467 11.62 3246560 73 380276 2873644 11.69 3253920 74 378614 2885136 11.60 3263750 75 369406 2872480 11.39 3241886 76 371316 2851953 11.52 3223269 77 368572 2853568 11.44 3222140 78 368470 2836692 11.50 3205162 79 368528 2836760 11.50 3205288 80 367726 2813515 11.56 3181241 81 362746 2797035 11.48 3159781 82 361849 2787551 11.49 3149400 83 358269 2781578 11.41 3139847 84 360721 2796537 11.43 3157258 85 360199 2786031 11.45 3146230 86 358440 2788169 11.39 3146609 87 355592 2777042 11.35 3132634 88 354796 2754880 11.41 3109676 89 351831 2744454 11.36 3096285 90 347907 2727968 11.31 3075875 91 348599 2734964 11.31 3083563 92 346335 2718300 11.30 3064635 93 347545 2706026 11.38 3053571 94 341002 2685355 11.27 3026357 95 339325 2683585 11.23 3022910 96 336902 2679600 11.17 3016502 97 339982 2657113 11.34 2997095 98 336231 2650617 11.26 2986848 99 332197 2635439 11.19 2967636 100 331709 2615424 11.26 2947133 101 330395 2621030 11.19 2951425 102 325240 2574071 11.22 2899311 103 321139 2556372 11.16 2877511 104 320251 2562382 11.11 2882633 105 319204 2550790 11.12 2869994 106 315794 2534031 11.08 2849825 107 314653 2525422 11.08 2840075 108 311055 2506814 11.04 2817869 109 310998 2499275 11.07 2810273 110 308914 2470199 11.12 2779113 111 306252 2467442 11.04 2773694 112 303621 2440110 11.07 2743731 113 300416 2424080 11.03 2724496 114 297902 2402394 11.03 2700296 115 296425 2392542 11.02 2688967 116 293225 2380977 10.96 2674202 117 291798 2365425 10.98 2657223 118 288851 2348365 10.95 2637216 119 288727 2336998 11.00 2625725 120 283144 2306465 10.93 2589609 121 280957 2291251 10.92 2572208 122 277908 2267200 10.92 2545108 123 277841 2258058 10.96 2535899 124 276348 2230703 11.02 2507051 125 269684 2219751 10.83 2489435 126 266399 2194470 10.83 2460869 127 264214 2183144 10.80 2447358 128 263376 2172603 10.81 2435979 129 260765 2146904 10.83 2407669 130 257091 2128806 10.78 2385897 131 255813 2114462 10.79 2370275 132 253091 2093128 10.79 2346219 133 250682 2078855 10.76 2329537 134 245004 2053989 10.66 2298993 135 218963 2023327 9.77 2242290 136 105063 1909627 5.21 2014690 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 23710 5658120 0.42 5681830 2 20562 4797697 0.43 4818259 3 18384 4591514 0.40 4609898 4 18660 4616522 0.40 4635182 5 18176 4568584 0.40 4586760 6 18745 4490761 0.42 4509506 7 18038 4556615 0.39 4574653 8 19302 4652381 0.41 4671683 9 18292 4585245 0.40 4603537 10 18405 4672451 0.39 4690856 11 18569 4734926 0.39 4753495 12 18501 4703732 0.39 4722233 13 18071 4667879 0.39 4685950 14 18293 4677057 0.39 4695350 15 18365 4642464 0.39 4660829 16 18492 4707333 0.39 4725825 17 18181 4727118 0.38 4745299 18 18012 4683274 0.38 4701286 19 17907 4739392 0.38 4757299 20 18074 4698072 0.38 4716146 21 18381 4699341 0.39 4717722 22 18352 4715262 0.39 4733614 23 18303 4687419 0.39 4705722 24 18554 4705263 0.39 4723817 25 18256 4708508 0.39 4726764 26 18190 4738926 0.38 4757116 27 18154 4690865 0.39 4709019 28 18502 4684136 0.39 4702638 29 18493 4706541 0.39 4725034 30 18451 4658475 0.39 4676926 31 18042 4714656 0.38 4732698 32 18417 4696535 0.39 4714952 33 18281 4723839 0.39 4742120 34 18206 4713203 0.38 4731409 35 17831 4678999 0.38 4696830 36 18082 4693897 0.38 4711979 37 18013 4639499 0.39 4657512 38 18105 4694374 0.38 4712479 39 18208 4669507 0.39 4687715 40 18129 4693105 0.38 4711234 41 18196 4714531 0.38 4732727 42 18616 4736030 0.39 4754646 43 18023 4673049 0.38 4691072 44 18177 4680008 0.39 4698185 45 18088 4644016 0.39 4662104 46 17940 4631068 0.39 4649008 47 18178 4646880 0.39 4665058 48 17938 4670013 0.38 4687951 49 17915 4614188 0.39 4632103 50 18136 4688718 0.39 4706854 51 17928 4613300 0.39 4631228 52 18299 4645012 0.39 4663311 53 18153 4607826 0.39 4625979 54 18211 4603041 0.39 4621252 55 17498 4570741 0.38 4588239 56 17708 4594551 0.38 4612259 57 17690 4547670 0.39 4565360 58 17969 4573006 0.39 4590975 59 17638 4575718 0.38 4593356 60 17993 4605596 0.39 4623589 61 17345 4534729 0.38 4552074 62 17817 4590069 0.39 4607886 63 17925 4545901 0.39 4563826 64 17708 4552861 0.39 4570569 65 17828 4576486 0.39 4594314 66 17865 4535599 0.39 4553464 67 17902 4513713 0.40 4531615 68 17883 4556631 0.39 4574514 69 17603 4498952 0.39 4516555 70 17802 4508890 0.39 4526692 71 17569 4504516 0.39 4522085 72 17844 4474473 0.40 4492317 73 17230 4462550 0.38 4479780 74 17613 4445985 0.39 4463598 75 17244 4410189 0.39 4427433 76 17190 4423019 0.39 4440209 77 17262 4407919 0.39 4425181 78 17483 4397560 0.40 4415043 79 17112 4380211 0.39 4397323 80 17192 4387407 0.39 4404599 81 16918 4339992 0.39 4356910 82 16954 4340681 0.39 4357635 83 17073 4321502 0.39 4338575 84 17216 4315915 0.40 4333131 85 16849 4306910 0.39 4323759 86 17090 4320026 0.39 4337116 87 16598 4264151 0.39 4280749 88 16776 4270898 0.39 4287674 89 16691 4265088 0.39 4281779 90 16920 4249951 0.40 4266871 91 16724 4218142 0.39 4234866 92 16792 4202713 0.40 4219505 93 16646 4173281 0.40 4189927 94 16375 4180686 0.39 4197061 95 16185 4150301 0.39 4166486 96 16311 4133593 0.39 4149904 97 16573 4106769 0.40 4123342 98 16259 4122937 0.39 4139196 99 16454 4087433 0.40 4103887 100 16171 4069737 0.40 4085908 101 16088 4047611 0.40 4063699 102 15881 4023073 0.39 4038954 103 16132 3992322 0.40 4008454 104 16038 3987666 0.40 4003704 105 16088 3949774 0.41 3965862 106 15873 3934351 0.40 3950224 107 15613 3918672 0.40 3934285 108 15929 3897556 0.41 3913485 109 15732 3885765 0.40 3901497 110 15747 3873092 0.40 3888839 111 15722 3831795 0.41 3847517 112 15796 3809775 0.41 3825571 113 15678 3766054 0.41 3781732 114 15527 3750582 0.41 3766109 115 15195 3713281 0.41 3728476 116 15198 3711099 0.41 3726297 117 15060 3684366 0.41 3699426 118 15439 3660963 0.42 3676402 119 15287 3640752 0.42 3656039 120 15697 3615727 0.43 3631424 121 15110 3565718 0.42 3580828 122 15313 3563930 0.43 3579243 123 14916 3511066 0.42 3525982 124 14809 3493287 0.42 3508096 125 14989 3460550 0.43 3475539 126 14833 3428396 0.43 3443229 127 14839 3391338 0.44 3406177 128 14947 3379977 0.44 3394924 129 15271 3345891 0.45 3361162 130 15586 3322818 0.47 3338404 131 15844 3300558 0.48 3316402 132 16024 3267473 0.49 3283497 133 15607 3224184 0.48 3239791 134 14748 3206041 0.46 3220789 135 12325 3126864 0.39 3139189 136 4578 2916087 0.16 2920665 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 82385 17484436 0.47 17566821 2 86905 18525863 0.47 18612768 3 77714 18672378 0.41 18750092 4 85262 18614764 0.46 18700026 5 79659 18528958 0.43 18608617 6 89191 18462296 0.48 18551487 7 80769 18356656 0.44 18437425 8 85374 18548549 0.46 18633923 9 77404 18396485 0.42 18473889 10 83852 18506315 0.45 18590167 11 77358 18390695 0.42 18468053 12 84802 18357500 0.46 18442302 13 79662 18421087 0.43 18500749 14 85271 18463981 0.46 18549252 15 78491 18419959 0.42 18498450 16 82663 18330488 0.45 18413151 17 78227 18508425 0.42 18586652 18 84018 18504813 0.45 18588831 19 79741 18523344 0.43 18603085 20 84231 18445525 0.45 18529756 21 78870 18324412 0.43 18403282 22 83348 18275765 0.45 18359113 23 75862 18310719 0.41 18386581 24 81208 18355439 0.44 18436647 25 76686 18371431 0.42 18448117 26 83856 18428173 0.45 18512029 27 79222 18529536 0.43 18608758 28 82988 18429252 0.45 18512240 29 76656 18438601 0.41 18515257 30 80323 18370297 0.44 18450620 31 74479 18274572 0.41 18349051 32 79649 18350074 0.43 18429723 33 77287 18251009 0.42 18328296 34 83142 18370609 0.45 18453751 35 76594 18385069 0.41 18461663 36 79399 18395923 0.43 18475322 37 74002 18305263 0.40 18379265 38 78451 18352176 0.43 18430627 39 75734 18310961 0.41 18386695 40 80938 18274898 0.44 18355836 41 77304 18282215 0.42 18359519 42 80041 18188677 0.44 18268718 43 73493 18201567 0.40 18275060 44 75321 18291442 0.41 18366763 45 73306 18305925 0.40 18379231 46 80817 18218098 0.44 18298915 47 76540 18222494 0.42 18299034 48 79090 18091711 0.44 18170801 49 73867 18183224 0.40 18257091 50 74968 18188520 0.41 18263488 51 71692 18223553 0.39 18295245 52 78980 18155838 0.43 18234818 53 76011 18176436 0.42 18252447 54 79347 18160933 0.44 18240280 55 73841 18066957 0.41 18140798 56 74313 18143945 0.41 18218258 57 72162 18180568 0.40 18252730 58 75396 18065460 0.42 18140856 59 72686 18160305 0.40 18232991 60 77435 18075045 0.43 18152480 61 73189 17980259 0.41 18053448 62 74797 18069960 0.41 18144757 63 70796 17945080 0.39 18015876 64 73032 17938520 0.41 18011552 65 71527 17969488 0.40 18041015 66 75360 17976283 0.42 18051643 67 73045 17963598 0.40 18036643 68 73557 18004990 0.41 18078547 69 69989 17894487 0.39 17964476 70 72036 17818965 0.40 17891001 71 70166 17875968 0.39 17946134 72 73181 17764061 0.41 17837242 73 70412 17751559 0.40 17821971 74 72925 17761693 0.41 17834618 75 69340 17643123 0.39 17712463 76 71030 17662755 0.40 17733785 77 68601 17632888 0.39 17701489 78 70905 17542527 0.40 17613432 79 68629 17576189 0.39 17644818 80 70788 17515253 0.40 17586041 81 68399 17419017 0.39 17487416 82 70273 17365613 0.40 17435886 83 67300 17279456 0.39 17346756 84 68058 17196611 0.39 17264669 85 66515 17168593 0.39 17235108 86 68729 17183926 0.40 17252655 87 67487 17117573 0.39 17185060 88 69242 17038050 0.40 17107292 89 66231 17054139 0.39 17120370 90 68022 16966238 0.40 17034260 91 65144 16964089 0.38 17029233 92 65998 16885768 0.39 16951766 93 65638 16753240 0.39 16818878 94 67928 16665435 0.41 16733363 95 65450 16612609 0.39 16678059 96 66133 16558611 0.40 16624744 97 63276 16575936 0.38 16639212 98 64577 16569078 0.39 16633655 99 63279 16472088 0.38 16535367 100 65913 16410976 0.40 16476889 101 64315 16305908 0.39 16370223 102 64710 16183605 0.40 16248315 103 61696 16062272 0.38 16123968 104 61235 15970382 0.38 16031617 105 60639 15872937 0.38 15933576 106 63229 15868650 0.40 15931879 107 62304 15833064 0.39 15895368 108 62783 15746744 0.40 15809527 109 61544 15711495 0.39 15773039 110 60242 15610658 0.38 15670900 111 59241 15477604 0.38 15536845 112 60725 15360735 0.39 15421460 113 59885 15278720 0.39 15338605 114 61227 15153049 0.40 15214276 115 59408 15018546 0.39 15077954 116 58911 15002903 0.39 15061814 117 58205 14933375 0.39 14991580 118 58768 14841500 0.39 14900268 119 58020 14763847 0.39 14821867 120 59207 14614299 0.40 14673506 121 58287 14533853 0.40 14592140 122 57300 14408443 0.40 14465743 123 56505 14265089 0.39 14321594 124 56891 14146360 0.40 14203251 125 55874 14013816 0.40 14069690 126 57411 13910478 0.41 13967889 127 56815 13824200 0.41 13881015 128 57050 13775649 0.41 13832699 129 56672 13675129 0.41 13731801 130 57811 13526580 0.43 13584391 131 58065 13428110 0.43 13486175 132 59749 13269299 0.45 13329048 133 60828 13138898 0.46 13199726 134 61328 13040794 0.47 13102122 135 47416 12861327 0.37 12908743 136 24801 12260881 0.20 12285682 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 223006 1824222 10.89 2047228 2 204291 1653662 11.00 1857953 3 198989 1655815 10.73 1854804 4 198569 1648888 10.75 1847457 5 200540 1637056 10.91 1837596 6 198122 1657277 10.68 1855399 7 199472 1640900 10.84 1840372 8 198079 1607958 10.97 1806037 9 196812 1592142 11.00 1788954 10 196669 1573158 11.11 1769827 11 194966 1548366 11.18 1743332 12 189962 1517017 11.13 1706979 13 185826 1489743 11.09 1675569 14 185261 1499830 10.99 1685091 15 184297 1510806 10.87 1695103 16 182864 1482173 10.98 1665037 17 180448 1472364 10.92 1652812 18 176472 1447634 10.87 1624106 19 177179 1427300 11.04 1604479 20 173525 1401308 11.02 1574833 21 171100 1378227 11.04 1549327 22 166454 1353494 10.95 1519948 23 164202 1338579 10.93 1502781 24 161384 1317560 10.91 1478944 25 159987 1318404 10.82 1478391 26 159201 1311981 10.82 1471182 27 156656 1294869 10.79 1451525 28 154640 1270768 10.85 1425408 29 151092 1252380 10.77 1403472 30 149866 1228977 10.87 1378843 31 146910 1203057 10.88 1349967 32 148354 1201320 10.99 1349674 33 144119 1175770 10.92 1319889 34 140632 1156537 10.84 1297169 35 139166 1151679 10.78 1290845 36 136847 1129101 10.81 1265948 37 135071 1123052 10.74 1258123 38 133914 1104016 10.82 1237930 39 133679 1095292 10.88 1228971 40 131014 1075322 10.86 1206336 41 128915 1070563 10.75 1199478 42 125255 1042529 10.73 1167784 43 125072 1029132 10.84 1154204 44 122238 1011228 10.78 1133466 45 118886 998293 10.64 1117179 46 117301 977697 10.71 1094998 47 116015 975659 10.63 1091674 48 114130 955412 10.67 1069542 49 114104 944466 10.78 1058570 50 110080 920520 10.68 1030600 51 110142 913995 10.75 1024137 52 106496 899542 10.59 1006038 53 103907 882748 10.53 986655 54 104263 870370 10.70 974633 55 101003 857163 10.54 958166 56 101668 849777 10.69 951445 57 99356 837956 10.60 937312 58 96863 824094 10.52 920957 59 95671 806570 10.60 902241 60 93524 796348 10.51 889872 61 92912 787261 10.56 880173 62 92185 778830 10.58 871015 63 91296 767221 10.63 858517 64 88703 747407 10.61 836110 65 86551 739802 10.47 826353 66 85127 729179 10.45 814306 67 82852 714562 10.39 797414 68 82270 706184 10.43 788454 69 81564 697952 10.46 779516 70 80188 682688 10.51 762876 71 79019 676385 10.46 755404 72 77624 661559 10.50 739183 73 77134 652930 10.57 730064 74 75885 645986 10.51 721871 75 72820 633773 10.31 706593 76 72081 621966 10.39 694047 77 70168 613401 10.26 683569 78 69397 602370 10.33 671767 79 69171 598187 10.36 667358 80 68484 584772 10.48 653256 81 66666 574654 10.40 641320 82 64835 564439 10.30 629274 83 64163 555607 10.35 619770 84 63269 553800 10.25 617069 85 62394 545402 10.27 607796 86 61441 536794 10.27 598235 87 60867 527522 10.34 588389 88 59367 518671 10.27 578038 89 58316 510850 10.25 569166 90 57120 500877 10.24 557997 91 55902 500658 10.04 556560 92 55797 489794 10.23 545591 93 55292 482511 10.28 537803 94 53606 473534 10.17 527140 95 52818 469102 10.12 521920 96 51693 459984 10.10 511677 97 51673 452385 10.25 504058 98 50607 445314 10.20 495921 99 48950 438188 10.05 487138 100 48155 432010 10.03 480165 101 48194 428589 10.11 476783 102 46680 417284 10.06 463964 103 45765 410641 10.03 456406 104 45011 405785 9.98 450796 105 44728 399738 10.06 444466 106 43493 392437 9.98 435930 107 43073 388272 9.99 431345 108 41776 379993 9.90 421769 109 41963 376673 10.02 418636 110 40610 368688 9.92 409298 111 39737 364428 9.83 404165 112 39608 356885 9.99 396493 113 38981 352837 9.95 391818 114 37911 347844 9.83 385755 115 37489 341341 9.90 378830 116 36650 336534 9.82 373184 117 36169 329424 9.89 365593 118 35628 323568 9.92 359196 119 34904 319417 9.85 354321 120 34257 313399 9.85 347656 121 33683 308454 9.84 342137 122 32524 301724 9.73 334248 123 32530 299730 9.79 332260 124 32089 294294 9.83 326383 125 31057 289588 9.69 320645 126 30362 284555 9.64 314917 127 30012 279873 9.68 309885 128 29472 276374 9.64 305846 129 28864 270710 9.64 299574 130 28333 266419 9.61 294752 131 28068 261192 9.70 289260 132 27393 256844 9.64 284237 133 26736 254372 9.51 281108 134 25885 246818 9.49 272703 135 23178 240568 8.79 263746 136 11450 209577 5.18 221027 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14216 3339656 0.42 3353872 2 11641 2781188 0.42 2792829 3 10535 2611193 0.40 2621728 4 10457 2588023 0.40 2598480 5 10209 2536898 0.40 2547107 6 10068 2455325 0.41 2465393 7 9727 2470012 0.39 2479739 8 10044 2491085 0.40 2501129 9 9695 2428796 0.40 2438491 10 9803 2450936 0.40 2460739 11 9515 2451410 0.39 2460925 12 9448 2406450 0.39 2415898 13 8986 2355312 0.38 2364298 14 8940 2327661 0.38 2336601 15 8898 2282454 0.39 2291352 16 8963 2276392 0.39 2285355 17 8402 2263647 0.37 2272049 18 8437 2215559 0.38 2223996 19 8290 2212154 0.37 2220444 20 8263 2172228 0.38 2180491 21 8158 2144993 0.38 2153151 22 8101 2125930 0.38 2134031 23 7956 2080641 0.38 2088597 24 7824 2059889 0.38 2067713 25 7774 2035693 0.38 2043467 26 7537 2012496 0.37 2020033 27 7537 1972186 0.38 1979723 28 7388 1943830 0.38 1951218 29 7209 1930655 0.37 1937864 30 7268 1885374 0.38 1892642 31 7036 1884595 0.37 1891631 32 6890 1855030 0.37 1861920 33 6913 1833790 0.38 1840703 34 6633 1808386 0.37 1815019 35 6640 1767385 0.37 1774025 36 6373 1747254 0.36 1753627 37 6460 1703132 0.38 1709592 38 6250 1700321 0.37 1706571 39 6358 1673482 0.38 1679840 40 6144 1659370 0.37 1665514 41 6019 1642452 0.37 1648471 42 6070 1629647 0.37 1635717 43 5853 1588294 0.37 1594147 44 5789 1568030 0.37 1573819 45 5721 1536979 0.37 1542700 46 5529 1504400 0.37 1509929 47 5444 1490377 0.36 1495821 48 5401 1474709 0.36 1480110 49 5507 1442347 0.38 1447854 50 5281 1445167 0.36 1450448 51 5256 1405752 0.37 1411008 52 5237 1398674 0.37 1403911 53 5066 1367287 0.37 1372353 54 5020 1347498 0.37 1352518 55 4969 1318854 0.38 1323823 56 4576 1302609 0.35 1307185 57 4748 1272870 0.37 1277618 58 4628 1262743 0.37 1267371 59 4594 1246072 0.37 1250666 60 4513 1238500 0.36 1243013 61 4291 1203877 0.36 1208168 62 4324 1204157 0.36 1208481 63 4378 1177497 0.37 1181875 64 4328 1160821 0.37 1165149 65 4408 1151180 0.38 1155588 66 4126 1124582 0.37 1128708 67 4103 1103637 0.37 1107740 68 4147 1096731 0.38 1100878 69 3981 1073527 0.37 1077508 70 3947 1060656 0.37 1064603 71 3875 1047435 0.37 1051310 72 3827 1028295 0.37 1032122 73 3722 1014209 0.37 1017931 74 3651 996600 0.37 1000251 75 3574 973361 0.37 976935 76 3573 962339 0.37 965912 77 3587 946436 0.38 950023 78 3429 931129 0.37 934558 79 3404 917850 0.37 921254 80 3304 906113 0.36 909417 81 3315 886829 0.37 890144 82 3146 878227 0.36 881373 83 3153 863697 0.36 866850 84 3159 850687 0.37 853846 85 3028 840288 0.36 843316 86 3121 830806 0.37 833927 87 3022 808554 0.37 811576 88 2943 801396 0.37 804339 89 2915 788405 0.37 791320 90 2871 776648 0.37 779519 91 2734 761319 0.36 764053 92 2769 753821 0.37 756590 93 2772 739023 0.37 741795 94 2804 734249 0.38 737053 95 2701 719424 0.37 722125 96 2720 706855 0.38 709575 97 2625 692172 0.38 694797 98 2552 688018 0.37 690570 99 2501 672134 0.37 674635 100 2494 661331 0.38 663825 101 2493 654715 0.38 657208 102 2477 645835 0.38 648312 103 2414 634694 0.38 637108 104 2287 628439 0.36 630726 105 2369 615799 0.38 618168 106 2235 606592 0.37 608827 107 2189 595692 0.37 597881 108 2140 585480 0.36 587620 109 2094 578099 0.36 580193 110 2117 569820 0.37 571937 111 2106 557206 0.38 559312 112 2016 550681 0.36 552697 113 2069 542131 0.38 544200 114 2061 533978 0.38 536039 115 2033 523400 0.39 525433 116 1933 517719 0.37 519652 117 1907 509140 0.37 511047 118 1972 499566 0.39 501538 119 1935 491844 0.39 493779 120 1948 484468 0.40 486416 121 1885 472646 0.40 474531 122 1832 468401 0.39 470233 123 1871 458408 0.41 460279 124 1755 452942 0.39 454697 125 1817 446175 0.41 447992 126 1726 437836 0.39 439562 127 1718 428894 0.40 430612 128 1748 422497 0.41 424245 129 1738 415620 0.42 417358 130 1749 406753 0.43 408502 131 1676 402064 0.42 403740 132 1682 393058 0.43 394740 133 1578 385551 0.41 387129 134 1492 380507 0.39 381999 135 1194 361701 0.33 362895 136 585 313804 0.19 314389 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 46215 10642086 0.43 10688301 2 45827 11146306 0.41 11192133 3 43340 11095147 0.39 11138487 4 44598 10939423 0.41 10984021 5 42930 10750289 0.40 10793219 6 44225 10596003 0.42 10640228 7 41829 10425091 0.40 10466920 8 41907 10425704 0.40 10467611 9 38787 10243948 0.38 10282735 10 40140 10209154 0.39 10249294 11 38281 10051929 0.38 10090210 12 38941 9924080 0.39 9963021 13 37742 9831333 0.38 9869075 14 38272 9735046 0.39 9773318 15 36138 9582972 0.38 9619110 16 36260 9421513 0.38 9457773 17 35255 9404443 0.37 9439698 18 36161 9286818 0.39 9322979 19 34667 9190467 0.38 9225134 20 34992 9064772 0.38 9099764 21 33130 8918774 0.37 8951904 22 33813 8800004 0.38 8833817 23 31354 8695790 0.36 8727144 24 32282 8602924 0.37 8635206 25 31385 8489477 0.37 8520862 26 31876 8399405 0.38 8431281 27 31200 8334725 0.37 8365925 28 31328 8198669 0.38 8229997 29 29389 8091942 0.36 8121331 30 29611 7976644 0.37 8006255 31 28239 7846315 0.36 7874554 32 28771 7800239 0.37 7829010 33 28203 7651077 0.37 7679280 34 29018 7594511 0.38 7623529 35 27383 7482317 0.36 7509700 36 27730 7384150 0.37 7411880 37 25972 7246594 0.36 7272566 38 26457 7167825 0.37 7194282 39 25952 7057191 0.37 7083143 40 26494 6956766 0.38 6983260 41 25491 6886558 0.37 6912049 42 25562 6769331 0.38 6794893 43 23644 6690430 0.35 6714074 44 24093 6631106 0.36 6655199 45 23407 6542117 0.36 6565524 46 24564 6411093 0.38 6435657 47 23351 6313910 0.37 6337261 48 23478 6192377 0.38 6215855 49 22230 6131364 0.36 6153594 50 21790 6059599 0.36 6081389 51 21244 5999072 0.35 6020316 52 21870 5909032 0.37 5930902 53 21373 5845827 0.36 5867200 54 21493 5755752 0.37 5777245 55 20430 5653306 0.36 5673736 56 20187 5587477 0.36 5607664 57 19647 5517172 0.35 5536819 58 19945 5405185 0.37 5425130 59 19511 5357919 0.36 5377430 60 19706 5267607 0.37 5287313 61 19006 5170908 0.37 5189914 62 18567 5146715 0.36 5165282 63 18254 5048955 0.36 5067209 64 18112 4969129 0.36 4987241 65 17687 4915099 0.36 4932786 66 18057 4844697 0.37 4862754 67 17188 4766722 0.36 4783910 68 17126 4715427 0.36 4732553 69 16565 4616482 0.36 4633047 70 16324 4545104 0.36 4561428 71 16304 4504606 0.36 4520910 72 16328 4426096 0.37 4442424 73 15710 4374855 0.36 4390565 74 15746 4328057 0.36 4343803 75 15132 4240929 0.36 4256061 76 15256 4183836 0.36 4199092 77 14760 4115408 0.36 4130168 78 14957 4038516 0.37 4053473 79 14351 3993915 0.36 4008266 80 14299 3933708 0.36 3948007 81 13734 3862391 0.35 3876125 82 14043 3814509 0.37 3828552 83 13518 3750701 0.36 3764219 84 13295 3692639 0.36 3705934 85 13008 3643970 0.36 3656978 86 13142 3600789 0.36 3613931 87 12859 3535265 0.36 3548124 88 13003 3468793 0.37 3481796 89 12322 3429214 0.36 3441536 90 12382 3372081 0.37 3384463 91 11814 3333701 0.35 3345515 92 11919 3288581 0.36 3300500 93 11587 3231954 0.36 3243541 94 11968 3180207 0.37 3192175 95 11428 3134605 0.36 3146033 96 11312 3083677 0.37 3094989 97 10767 3046117 0.35 3056884 98 10880 3009080 0.36 3019960 99 10571 2957928 0.36 2968499 100 10753 2914254 0.37 2925007 101 10496 2863768 0.37 2874264 102 10474 2818834 0.37 2829308 103 9725 2771613 0.35 2781338 104 9824 2727977 0.36 2737801 105 9570 2688424 0.35 2697994 106 9835 2654633 0.37 2664468 107 9662 2619699 0.37 2629361 108 9278 2574454 0.36 2583732 109 9463 2541246 0.37 2550709 110 8919 2495459 0.36 2504378 111 8837 2447564 0.36 2456401 112 8874 2411396 0.37 2420270 113 8794 2383234 0.37 2392028 114 8743 2346244 0.37 2354987 115 8457 2300345 0.37 2308802 116 8445 2275265 0.37 2283710 117 8193 2241016 0.36 2249209 118 8388 2205198 0.38 2213586 119 7933 2170309 0.36 2178242 120 8012 2126667 0.38 2134679 121 7967 2098107 0.38 2106074 122 7751 2060110 0.37 2067861 123 7725 2026170 0.38 2033895 124 7709 1998053 0.38 2005762 125 7443 1961295 0.38 1968738 126 7573 1934949 0.39 1942522 127 7406 1901331 0.39 1908737 128 7236 1879588 0.38 1886824 129 7155 1847129 0.39 1854284 130 7065 1807957 0.39 1815022 131 7275 1777195 0.41 1784470 132 7349 1740931 0.42 1748280 133 7028 1711083 0.41 1718111 134 6846 1682975 0.41 1689821 135 5416 1638511 0.33 1643927 136 3131 1480907 0.21 1484038