41F_R1_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.22.3
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 56050400 lines in total
Total number of methylation call strings processed: 112100800

Final Cytosine Methylation Report
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Total number of C's analysed:	1402364113

Total methylated C's in CpG context:	21603092
Total methylated C's in CHG context:	1050441
Total methylated C's in CHH context:	4458912

Total C to T conversions in CpG context:	158790370
Total C to T conversions in CHG context:	248626025
Total C to T conversions in CHH context:	967835273

C methylated in CpG context:	12.0%
C methylated in non-CpG context:	0.5%