3F_R1_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.22.3
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 86601366 lines in total
Total number of methylation call strings processed: 173202732

Final Cytosine Methylation Report
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Total number of C's analysed:	2245598302

Total methylated C's in CpG context:	33278296
Total methylated C's in CHG context:	1581182
Total methylated C's in CHH context:	6889997

Total C to T conversions in CpG context:	258732657
Total C to T conversions in CHG context:	397571420
Total C to T conversions in CHH context:	1547544750

C methylated in CpG context:	11.4%
C methylated in non-CpG context:	0.4%