CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 244528 1775678 12.10 2020206 2 228357 1638877 12.23 1867234 3 225797 1669060 11.92 1894857 4 230012 1685084 12.01 1915096 5 232228 1681638 12.13 1913866 6 234720 1734959 11.92 1969679 7 239397 1737368 12.11 1976765 8 239772 1721918 12.22 1961690 9 240585 1724137 12.25 1964722 10 242394 1726258 12.31 1968652 11 245222 1722064 12.46 1967286 12 243069 1717123 12.40 1960192 13 240461 1702645 12.38 1943106 14 243290 1741547 12.26 1984837 15 245778 1763848 12.23 2009626 16 245858 1758137 12.27 2003995 17 246912 1769670 12.24 2016582 18 244081 1757898 12.19 2001979 19 246881 1753275 12.34 2000156 20 245027 1749829 12.28 1994856 21 245213 1740188 12.35 1985401 22 244062 1734980 12.33 1979042 23 244640 1748768 12.27 1993408 24 242671 1731898 12.29 1974569 25 243538 1763913 12.13 2007451 26 245384 1774658 12.15 2020042 27 244857 1767295 12.17 2012152 28 243895 1756959 12.19 2000854 29 243216 1752830 12.18 1996046 30 241772 1744438 12.17 1986210 31 242085 1736705 12.23 1978790 32 246308 1758408 12.29 2004716 33 244485 1756759 12.22 2001244 34 243208 1743153 12.24 1986361 35 240486 1753818 12.06 1994304 36 239953 1742078 12.11 1982031 37 240084 1749435 12.07 1989519 38 239206 1741451 12.08 1980657 39 242800 1749439 12.19 1992239 40 240927 1737604 12.18 1978531 41 241629 1761713 12.06 2003342 42 238146 1736835 12.06 1974981 43 241028 1742845 12.15 1983873 44 238562 1729684 12.12 1968246 45 234195 1729458 11.93 1963653 46 233554 1715165 11.99 1948719 47 235348 1733118 11.96 1968466 48 233831 1714969 12.00 1948800 49 236799 1720021 12.10 1956820 50 233092 1700247 12.06 1933339 51 234165 1702929 12.09 1937094 52 230260 1702057 11.92 1932317 53 227635 1699316 11.81 1926951 54 230257 1697945 11.94 1928202 55 228095 1694059 11.87 1922154 56 229874 1697287 11.93 1927161 57 228846 1695563 11.89 1924409 58 224686 1679660 11.80 1904346 59 224878 1665709 11.89 1890587 60 222914 1662044 11.83 1884958 61 223260 1669764 11.79 1893024 62 225028 1675077 11.84 1900105 63 225181 1673622 11.86 1898803 64 221458 1650059 11.83 1871517 65 218565 1657326 11.65 1875891 66 218830 1649114 11.72 1867944 67 215495 1637400 11.63 1852895 68 214831 1632091 11.63 1846922 69 216595 1626815 11.75 1843410 70 213743 1603035 11.76 1816778 71 213586 1608537 11.72 1822123 72 210314 1591022 11.68 1801336 73 211300 1589774 11.73 1801074 74 209968 1593989 11.64 1803957 75 205047 1585203 11.45 1790250 76 205165 1573770 11.53 1778935 77 204039 1571372 11.49 1775411 78 202509 1554745 11.52 1757254 79 203359 1550525 11.59 1753884 80 201677 1538437 11.59 1740114 81 199638 1526812 11.56 1726450 82 196638 1518735 11.46 1715373 83 195244 1510992 11.44 1706236 84 194438 1514258 11.38 1708696 85 194443 1507817 11.42 1702260 86 192936 1506364 11.35 1699300 87 191258 1497587 11.32 1688845 88 190800 1480463 11.42 1671263 89 187697 1470070 11.32 1657767 90 187503 1459312 11.39 1646815 91 185584 1465225 11.24 1650809 92 184541 1447912 11.30 1632453 93 184169 1435001 11.37 1619170 94 179430 1424216 11.19 1603646 95 178215 1419312 11.16 1597527 96 177137 1410905 11.15 1588042 97 177652 1400583 11.26 1578235 98 175497 1392437 11.19 1567934 99 173746 1380940 11.18 1554686 100 171990 1368435 11.17 1540425 101 170107 1364435 11.09 1534542 102 167239 1341811 11.08 1509050 103 164706 1328039 11.03 1492745 104 164656 1325206 11.05 1489862 105 164027 1317328 11.07 1481355 106 159975 1307645 10.90 1467620 107 159809 1302662 10.93 1462471 108 157779 1285488 10.93 1443267 109 157858 1279785 10.98 1437643 110 156028 1264252 10.99 1420280 111 154689 1257244 10.96 1411933 112 151735 1242587 10.88 1394322 113 150523 1229377 10.91 1379900 114 148861 1215305 10.91 1364166 115 147588 1208135 10.89 1355723 116 145281 1197918 10.82 1343199 117 145592 1189132 10.91 1334724 118 143456 1176607 10.87 1320063 119 143105 1171692 10.88 1314797 120 139701 1155601 10.79 1295302 121 138592 1141601 10.83 1280193 122 136325 1128084 10.78 1264409 123 136206 1119003 10.85 1255209 124 134570 1107321 10.84 1241891 125 130982 1096805 10.67 1227787 126 129230 1083270 10.66 1212500 127 127407 1075087 10.60 1202494 128 126760 1067750 10.61 1194510 129 125463 1055419 10.62 1180882 130 124434 1041162 10.68 1165596 131 123204 1035082 10.64 1158286 132 121784 1022069 10.65 1143853 133 119835 1013101 10.58 1132936 134 117156 1002881 10.46 1120037 135 105104 981687 9.67 1086791 136 50220 913418 5.21 963638 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 14027 3196377 0.44 3210404 2 12610 2725623 0.46 2738233 3 10610 2608373 0.41 2618983 4 10794 2618710 0.41 2629504 5 10573 2596098 0.41 2606671 6 10773 2554570 0.42 2565343 7 10509 2589974 0.40 2600483 8 10989 2645236 0.41 2656225 9 10569 2599174 0.40 2609743 10 10781 2659840 0.40 2670621 11 10620 2693192 0.39 2703812 12 10381 2677995 0.39 2688376 13 10212 2656664 0.38 2666876 14 10388 2660778 0.39 2671166 15 10442 2638514 0.39 2648956 16 10455 2680742 0.39 2691197 17 10294 2688328 0.38 2698622 18 10307 2669359 0.38 2679666 19 10265 2697240 0.38 2707505 20 10278 2678274 0.38 2688552 21 10342 2671906 0.39 2682248 22 10280 2690553 0.38 2700833 23 10332 2668754 0.39 2679086 24 10294 2683829 0.38 2694123 25 10198 2680103 0.38 2690301 26 10457 2701930 0.39 2712387 27 10019 2672600 0.37 2682619 28 10293 2664744 0.38 2675037 29 10152 2677284 0.38 2687436 30 10193 2657458 0.38 2667651 31 10340 2682484 0.38 2692824 32 10170 2670568 0.38 2680738 33 10248 2685774 0.38 2696022 34 10216 2680057 0.38 2690273 35 10045 2663151 0.38 2673196 36 10254 2672180 0.38 2682434 37 10012 2636758 0.38 2646770 38 10189 2664836 0.38 2675025 39 10049 2652732 0.38 2662781 40 10259 2664974 0.38 2675233 41 10326 2681352 0.38 2691678 42 10473 2682969 0.39 2693442 43 10039 2643919 0.38 2653958 44 10190 2653249 0.38 2663439 45 10005 2626090 0.38 2636095 46 10243 2623821 0.39 2634064 47 10077 2628687 0.38 2638764 48 10069 2638336 0.38 2648405 49 10058 2608457 0.38 2618515 50 10107 2640748 0.38 2650855 51 10037 2599884 0.38 2609921 52 10161 2616776 0.39 2626937 53 9963 2590157 0.38 2600120 54 10166 2590462 0.39 2600628 55 10057 2569044 0.39 2579101 56 10050 2586385 0.39 2596435 57 9864 2550051 0.39 2559915 58 10053 2567098 0.39 2577151 59 9895 2565182 0.38 2575077 60 10090 2575792 0.39 2585882 61 9770 2533922 0.38 2543692 62 9876 2560022 0.38 2569898 63 9795 2532068 0.39 2541863 64 9866 2538579 0.39 2548445 65 9991 2543214 0.39 2553205 66 9937 2519777 0.39 2529714 67 9873 2503245 0.39 2513118 68 10199 2523649 0.40 2533848 69 9882 2485268 0.40 2495150 70 9807 2494007 0.39 2503814 71 9890 2485319 0.40 2495209 72 9789 2459168 0.40 2468957 73 9621 2449246 0.39 2458867 74 9470 2438185 0.39 2447655 75 9530 2413094 0.39 2422624 76 9556 2416367 0.39 2425923 77 9746 2405631 0.40 2415377 78 9731 2395491 0.40 2405222 79 9587 2380821 0.40 2390408 80 9561 2380358 0.40 2389919 81 9495 2347995 0.40 2357490 82 9314 2341999 0.40 2351313 83 9461 2325307 0.41 2334768 84 9390 2322646 0.40 2332036 85 9217 2309917 0.40 2319134 86 9316 2311852 0.40 2321168 87 9346 2281039 0.41 2290385 88 9292 2281112 0.41 2290404 89 9224 2271526 0.40 2280750 90 9214 2259048 0.41 2268262 91 8904 2235618 0.40 2244522 92 8898 2222337 0.40 2231235 93 8831 2200299 0.40 2209130 94 8918 2198602 0.40 2207520 95 8833 2176955 0.40 2185788 96 8916 2165705 0.41 2174621 97 8614 2145789 0.40 2154403 98 8810 2149587 0.41 2158397 99 8783 2128012 0.41 2136795 100 8795 2110272 0.42 2119067 101 8623 2095809 0.41 2104432 102 8545 2074001 0.41 2082546 103 8477 2054877 0.41 2063354 104 8241 2051835 0.40 2060076 105 8509 2023836 0.42 2032345 106 8152 2012482 0.40 2020634 107 8328 1997483 0.42 2005811 108 8370 1985778 0.42 1994148 109 8202 1972052 0.41 1980254 110 8416 1967200 0.43 1975616 111 8207 1936091 0.42 1944298 112 8272 1924246 0.43 1932518 113 8011 1893987 0.42 1901998 114 7936 1883509 0.42 1891445 115 8012 1858872 0.43 1866884 116 7994 1853974 0.43 1861968 117 7917 1837011 0.43 1844928 118 7861 1821993 0.43 1829854 119 7831 1808491 0.43 1816322 120 7908 1792188 0.44 1800096 121 7878 1763121 0.44 1770999 122 7755 1754584 0.44 1762339 123 7595 1726919 0.44 1734514 124 7723 1718424 0.45 1726147 125 7669 1696810 0.45 1704479 126 7736 1675431 0.46 1683167 127 7622 1655361 0.46 1662983 128 7744 1645939 0.47 1653683 129 7811 1625359 0.48 1633170 130 8133 1612463 0.50 1620596 131 8302 1601239 0.52 1609541 132 8510 1578869 0.54 1587379 133 8392 1556905 0.54 1565297 134 7979 1542091 0.51 1550070 135 6399 1500465 0.42 1506864 136 2228 1377838 0.16 1380066 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 53076 9541521 0.55 9594597 2 57619 10136219 0.57 10193838 3 50542 10204723 0.49 10255265 4 56172 10180303 0.55 10236475 5 50946 10112827 0.50 10163773 6 58844 10081723 0.58 10140567 7 52244 10013874 0.52 10066118 8 55693 10115177 0.55 10170870 9 48199 10036782 0.48 10084981 10 53193 10080997 0.52 10134190 11 48126 10030739 0.48 10078865 12 55184 9991819 0.55 10047003 13 50731 10035559 0.50 10086290 14 55402 10053877 0.55 10109279 15 48463 10023387 0.48 10071850 16 52297 9972518 0.52 10024815 17 47689 10079697 0.47 10127386 18 53255 10065799 0.53 10119054 19 49460 10082961 0.49 10132421 20 54089 10033322 0.54 10087411 21 49170 9960385 0.49 10009555 22 52170 9930509 0.52 9982679 23 45659 9948624 0.46 9994283 24 50418 9973267 0.50 10023685 25 46896 9986160 0.47 10033056 26 52407 10018967 0.52 10071374 27 49085 10061796 0.49 10110881 28 52167 10007851 0.52 10060018 29 45959 10005053 0.46 10051012 30 49485 9964372 0.49 10013857 31 44537 9923865 0.45 9968402 32 49551 9966053 0.49 10015604 33 47398 9904286 0.48 9951684 34 51425 9969232 0.51 10020657 35 45912 9974239 0.46 10020151 36 47547 9985677 0.47 10033224 37 44048 9921119 0.44 9965167 38 48202 9956080 0.48 10004282 39 45394 9925515 0.46 9970909 40 49679 9904470 0.50 9954149 41 46106 9914882 0.46 9960988 42 47581 9855259 0.48 9902840 43 43849 9858414 0.44 9902263 44 44974 9901018 0.45 9945992 45 43443 9904776 0.44 9948219 46 48408 9853244 0.49 9901652 47 45751 9861927 0.46 9907678 48 47523 9785493 0.48 9833016 49 43303 9831298 0.44 9874601 50 43844 9827728 0.44 9871572 51 42042 9826008 0.43 9868050 52 46334 9794320 0.47 9840654 53 44558 9799165 0.45 9843723 54 47385 9787500 0.48 9834885 55 43121 9729538 0.44 9772659 56 42965 9768073 0.44 9811038 57 41505 9786020 0.42 9827525 58 43920 9708411 0.45 9752331 59 42445 9760434 0.43 9802879 60 45586 9698865 0.47 9744451 61 42741 9638797 0.44 9681538 62 42658 9668010 0.44 9710668 63 40670 9601060 0.42 9641730 64 41760 9580063 0.43 9621823 65 40197 9605075 0.42 9645272 66 43963 9594904 0.46 9638867 67 41819 9576754 0.43 9618573 68 42555 9591253 0.44 9633808 69 40016 9511849 0.42 9551865 70 40715 9456790 0.43 9497505 71 38994 9473553 0.41 9512547 72 41245 9404111 0.44 9445356 73 40471 9382907 0.43 9423378 74 42315 9380667 0.45 9422982 75 38752 9298386 0.42 9337138 76 39654 9314778 0.42 9354432 77 38045 9275170 0.41 9313215 78 39214 9213844 0.42 9253058 79 38777 9216408 0.42 9255185 80 40149 9165263 0.44 9205412 81 38241 9095328 0.42 9133569 82 39412 9052000 0.43 9091412 83 36355 8985609 0.40 9021964 84 37289 8936985 0.42 8974274 85 36536 8913746 0.41 8950282 86 37700 8902659 0.42 8940359 87 37534 8854745 0.42 8892279 88 38158 8803793 0.43 8841951 89 36273 8786022 0.41 8822295 90 36963 8731147 0.42 8768110 91 34749 8697425 0.40 8732174 92 35801 8641350 0.41 8677151 93 35898 8556993 0.42 8592891 94 37078 8496762 0.43 8533840 95 35188 8453215 0.41 8488403 96 35030 8417353 0.41 8452383 97 33971 8412465 0.40 8446436 98 34645 8391494 0.41 8426139 99 34139 8328956 0.41 8363095 100 35546 8283475 0.43 8319021 101 34539 8211086 0.42 8245625 102 34586 8120960 0.42 8155546 103 32626 8046524 0.40 8079150 104 32651 7978955 0.41 8011606 105 32046 7916337 0.40 7948383 106 33438 7895320 0.42 7928758 107 32577 7876730 0.41 7909307 108 33239 7813929 0.42 7847168 109 32073 7783215 0.41 7815288 110 31578 7705849 0.41 7737427 111 30828 7635275 0.40 7666103 112 31912 7552356 0.42 7584268 113 31335 7499943 0.42 7531278 114 32061 7422819 0.43 7454880 115 30844 7338320 0.42 7369164 116 30557 7324794 0.42 7355351 117 29737 7273554 0.41 7303291 118 30387 7223817 0.42 7254204 119 30118 7173129 0.42 7203247 120 30617 7077280 0.43 7107897 121 30255 7027199 0.43 7057454 122 29815 6954037 0.43 6983852 123 29029 6871843 0.42 6900872 124 29639 6804772 0.43 6834411 125 29034 6718617 0.43 6747651 126 29521 6664467 0.44 6693988 127 29398 6612751 0.44 6642149 128 29226 6587329 0.44 6616555 129 29441 6516177 0.45 6545618 130 30073 6440792 0.46 6470865 131 30198 6388897 0.47 6419095 132 31781 6296271 0.50 6328052 133 32409 6225666 0.52 6258075 134 33103 6164218 0.53 6197321 135 24404 6072117 0.40 6096521 136 12229 5734246 0.21 5746475 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 104549 868689 10.74 973238 2 94099 786032 10.69 880131 3 91598 787135 10.42 878733 4 91637 782937 10.48 874574 5 92279 775325 10.64 867604 6 91954 787053 10.46 879007 7 91642 777502 10.54 869144 8 90913 761461 10.67 852374 9 89840 752922 10.66 842762 10 90313 742255 10.85 832568 11 89129 730408 10.88 819537 12 87410 715736 10.88 803146 13 85231 704329 10.79 789560 14 84859 706984 10.72 791843 15 84550 711324 10.62 795874 16 83989 698972 10.73 782961 17 82955 693475 10.68 776430 18 80769 683791 10.56 764560 19 80604 672698 10.70 753302 20 78991 657851 10.72 736842 21 77826 648296 10.72 726122 22 76495 635878 10.74 712373 23 74922 630060 10.63 704982 24 73355 618265 10.61 691620 25 72917 619083 10.54 692000 26 72937 618077 10.56 691014 27 71365 609823 10.48 681188 28 69739 597663 10.45 667402 29 68821 587377 10.49 656198 30 68098 575100 10.59 643198 31 66971 563255 10.63 630226 32 67332 561981 10.70 629313 33 65434 553335 10.57 618769 34 64138 542594 10.57 606732 35 62841 542420 10.38 605261 36 62122 529481 10.50 591603 37 60910 527564 10.35 588474 38 60185 516833 10.43 577018 39 59983 512935 10.47 572918 40 59522 502772 10.59 562294 41 58979 502162 10.51 561141 42 56725 489184 10.39 545909 43 57401 482731 10.63 540132 44 55459 472357 10.51 527816 45 53732 466937 10.32 520669 46 53261 457687 10.42 510948 47 52648 457634 10.32 510282 48 51439 446594 10.33 498033 49 51460 441891 10.43 493351 50 50182 433550 10.37 483732 51 50088 427101 10.50 477189 52 48095 420840 10.26 468935 53 47233 412773 10.27 460006 54 46985 407077 10.35 454062 55 46161 403027 10.28 449188 56 45750 399070 10.29 444820 57 44838 392461 10.25 437299 58 43695 386926 10.15 430621 59 43386 378003 10.30 421389 60 42509 372694 10.24 415203 61 41935 369135 10.20 411070 62 41644 366878 10.19 408522 63 41552 360970 10.32 402522 64 40136 351094 10.26 391230 65 39622 347261 10.24 386883 66 38911 342927 10.19 381838 67 37886 336403 10.12 374289 68 37205 331721 10.08 368926 69 37044 328167 10.14 365211 70 36090 321099 10.10 357189 71 36529 318223 10.30 354752 72 34789 310888 10.06 345677 73 35252 307119 10.30 342371 74 34383 303947 10.16 338330 75 32925 296859 9.98 329784 76 32551 292708 10.01 325259 77 32170 288754 10.02 320924 78 32065 283054 10.18 315119 79 31321 282380 9.98 313701 80 31081 275269 10.15 306350 81 29839 270770 9.93 300609 82 29601 265607 10.03 295208 83 29365 262501 10.06 291866 84 28863 260691 9.97 289554 85 28623 257307 10.01 285930 86 28210 252880 10.04 281090 87 27576 248521 9.99 276097 88 27239 244168 10.04 271407 89 26526 240295 9.94 266821 90 26065 235890 9.95 261955 91 25438 236360 9.72 261798 92 25261 231772 9.83 257033 93 25304 227212 10.02 252516 94 24534 222956 9.91 247490 95 24037 221930 9.77 245967 96 23648 216216 9.86 239864 97 23317 213204 9.86 236521 98 22800 211069 9.75 233869 99 22295 206072 9.76 228367 100 22391 204237 9.88 226628 101 21938 202203 9.79 224141 102 21224 197544 9.70 218768 103 20937 194077 9.74 215014 104 20547 192296 9.65 212843 105 20485 189758 9.74 210243 106 19936 185658 9.70 205594 107 19619 183877 9.64 203496 108 19125 180622 9.57 199747 109 19272 178289 9.75 197561 110 18837 174937 9.72 193774 111 18093 172687 9.48 190780 112 17926 169248 9.58 187174 113 17605 166169 9.58 183774 114 17327 164434 9.53 181761 115 17407 160925 9.76 178332 116 17004 158910 9.67 175914 117 16576 156461 9.58 173037 118 16105 152951 9.53 169056 119 16123 151385 9.63 167508 120 15630 148796 9.51 164426 121 15567 146141 9.63 161708 122 15164 142937 9.59 158101 123 14943 142326 9.50 157269 124 14639 139536 9.50 154175 125 14303 136629 9.48 150932 126 14089 134432 9.49 148521 127 13564 133081 9.25 146645 128 13549 130311 9.42 143860 129 13262 128618 9.35 141880 130 13032 125850 9.38 138882 131 12679 123961 9.28 136640 132 12634 121740 9.40 134374 133 12410 120131 9.36 132541 134 11945 117204 9.25 129149 135 10637 115183 8.45 125820 136 5444 99010 5.21 104454 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 7337 1576059 0.46 1583396 2 6357 1313708 0.48 1320065 3 5209 1231403 0.42 1236612 4 5205 1219060 0.43 1224265 5 5020 1193942 0.42 1198962 6 4849 1156011 0.42 1160860 7 4647 1162693 0.40 1167340 8 4749 1169395 0.40 1174144 9 4757 1137995 0.42 1142752 10 4885 1150848 0.42 1155733 11 4418 1147309 0.38 1151727 12 4431 1126031 0.39 1130462 13 4217 1100633 0.38 1104850 14 4190 1088801 0.38 1092991 15 4250 1063634 0.40 1067884 16 4079 1065095 0.38 1069174 17 3963 1057634 0.37 1061597 18 4021 1034414 0.39 1038435 19 3872 1031353 0.37 1035225 20 3959 1012646 0.39 1016605 21 3672 997514 0.37 1001186 22 3718 990609 0.37 994327 23 3610 967410 0.37 971020 24 3599 960669 0.37 964268 25 3514 946244 0.37 949758 26 3467 937758 0.37 941225 27 3316 916496 0.36 919812 28 3359 904172 0.37 907531 29 3245 896213 0.36 899458 30 3162 877646 0.36 880808 31 3205 874851 0.37 878056 32 3159 862188 0.37 865347 33 3072 852507 0.36 855579 34 3102 840773 0.37 843875 35 2987 818079 0.36 821066 36 2865 813323 0.35 816188 37 2834 791210 0.36 794044 38 2846 789239 0.36 792085 39 2799 777364 0.36 780163 40 2734 769256 0.35 771990 41 2741 763942 0.36 766683 42 2630 758285 0.35 760915 43 2624 737005 0.35 739629 44 2670 727350 0.37 730020 45 2489 712795 0.35 715284 46 2512 698214 0.36 700726 47 2391 690698 0.34 693089 48 2478 683052 0.36 685530 49 2498 667520 0.37 670018 50 2399 671301 0.36 673700 51 2237 651592 0.34 653829 52 2293 648118 0.35 650411 53 2308 632648 0.36 634956 54 2272 624859 0.36 627131 55 2154 612393 0.35 614547 56 2113 604858 0.35 606971 57 2157 590672 0.36 592829 58 2120 585984 0.36 588104 59 2091 578530 0.36 580621 60 2026 573565 0.35 575591 61 2098 558292 0.37 560390 62 1997 558668 0.36 560665 63 1866 545919 0.34 547785 64 1939 540133 0.36 542072 65 1906 533383 0.36 535289 66 1893 522586 0.36 524479 67 1831 512296 0.36 514127 68 1821 512180 0.35 514001 69 1751 499673 0.35 501424 70 1764 493041 0.36 494805 71 1754 487641 0.36 489395 72 1777 477586 0.37 479363 73 1661 471484 0.35 473145 74 1689 464232 0.36 465921 75 1597 452304 0.35 453901 76 1642 448202 0.37 449844 77 1572 440328 0.36 441900 78 1607 432962 0.37 434569 79 1491 427655 0.35 429146 80 1539 423031 0.36 424570 81 1510 413716 0.36 415226 82 1464 408825 0.36 410289 83 1469 401126 0.36 402595 84 1489 396657 0.37 398146 85 1407 391211 0.36 392618 86 1406 388029 0.36 389435 87 1273 375849 0.34 377122 88 1360 373151 0.36 374511 89 1356 366587 0.37 367943 90 1263 362143 0.35 363406 91 1251 355369 0.35 356620 92 1230 351477 0.35 352707 93 1213 344879 0.35 346092 94 1305 342198 0.38 343503 95 1258 334708 0.37 335966 96 1257 330809 0.38 332066 97 1141 322119 0.35 323260 98 1189 320611 0.37 321800 99 1131 314282 0.36 315413 100 1136 309774 0.37 310910 101 1065 305688 0.35 306753 102 1094 300423 0.36 301517 103 1053 295521 0.36 296574 104 1074 292993 0.37 294067 105 1063 287578 0.37 288641 106 1054 282627 0.37 283681 107 1060 278264 0.38 279324 108 1029 273716 0.37 274745 109 978 269745 0.36 270723 110 936 265741 0.35 266677 111 1003 260485 0.38 261488 112 929 257458 0.36 258387 113 920 252573 0.36 253493 114 953 249298 0.38 250251 115 871 244126 0.36 244997 116 936 241797 0.39 242733 117 919 238531 0.38 239450 118 909 232660 0.39 233569 119 849 230221 0.37 231070 120 856 225879 0.38 226735 121 851 222246 0.38 223097 122 830 218630 0.38 219460 123 856 214881 0.40 215737 124 844 212013 0.40 212857 125 819 207984 0.39 208803 126 796 204823 0.39 205619 127 790 200250 0.39 201040 128 736 197898 0.37 198634 129 746 193631 0.38 194377 130 821 190692 0.43 191513 131 803 187865 0.43 188668 132 835 184088 0.45 184923 133 714 180920 0.39 181634 134 683 178303 0.38 178986 135 540 168693 0.32 169233 136 303 145721 0.21 146024 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 25646 4961338 0.51 4986984 2 25937 5189073 0.50 5215010 3 24149 5164379 0.47 5188528 4 24526 5082769 0.48 5107295 5 23122 4987687 0.46 5010809 6 24384 4911900 0.49 4936284 7 22262 4831118 0.46 4853380 8 22482 4824667 0.46 4847149 9 20167 4740686 0.42 4760853 10 21226 4723701 0.45 4744927 11 19294 4647429 0.41 4666723 12 20473 4579210 0.45 4599683 13 19542 4537699 0.43 4557241 14 20344 4488424 0.45 4508768 15 18447 4413772 0.42 4432219 16 18740 4338671 0.43 4357411 17 17897 4329227 0.41 4347124 18 18310 4274796 0.43 4293106 19 17764 4231209 0.42 4248973 20 18262 4165658 0.44 4183920 21 16788 4098740 0.41 4115528 22 17096 4037445 0.42 4054541 23 15588 3992185 0.39 4007773 24 15869 3948260 0.40 3964129 25 15474 3897107 0.40 3912581 26 15961 3851136 0.41 3867097 27 15490 3819088 0.40 3834578 28 15838 3755059 0.42 3770897 29 14104 3711034 0.38 3725138 30 14774 3652805 0.40 3667579 31 13874 3600334 0.38 3614208 32 14187 3572969 0.40 3587156 33 13692 3506465 0.39 3520157 34 14154 3482127 0.40 3496281 35 13097 3429256 0.38 3442353 36 13169 3384613 0.39 3397782 37 12433 3320275 0.37 3332708 38 12902 3281168 0.39 3294070 39 12640 3231939 0.39 3244579 40 13151 3191446 0.41 3204597 41 12305 3152478 0.39 3164783 42 12152 3098845 0.39 3110997 43 11425 3068010 0.37 3079435 44 11434 3036017 0.38 3047451 45 11131 3000435 0.37 3011566 46 11913 2935271 0.40 2947184 47 11246 2895717 0.39 2906963 48 11431 2837380 0.40 2848811 49 10522 2812949 0.37 2823471 50 10645 2780532 0.38 2791177 51 10037 2752133 0.36 2762170 52 10550 2709629 0.39 2720179 53 10138 2680961 0.38 2691099 54 10418 2641856 0.39 2652274 55 9813 2594572 0.38 2604385 56 9647 2565387 0.37 2575034 57 9425 2531290 0.37 2540715 58 9683 2479737 0.39 2489420 59 9221 2459038 0.37 2468259 60 9614 2421216 0.40 2430830 61 9233 2380255 0.39 2389488 62 8958 2364028 0.38 2372986 63 8699 2318650 0.37 2327349 64 8633 2283995 0.38 2292628 65 8274 2257563 0.37 2265837 66 8711 2228452 0.39 2237163 67 8309 2194925 0.38 2203234 68 8203 2169541 0.38 2177744 69 7895 2126246 0.37 2134141 70 7897 2092068 0.38 2099965 71 7651 2074638 0.37 2082289 72 7897 2036545 0.39 2044442 73 7705 2017228 0.38 2024933 74 7716 1993845 0.39 2001561 75 7163 1952884 0.37 1960047 76 7445 1929190 0.38 1936635 77 7049 1896506 0.37 1903555 78 7154 1860695 0.38 1867849 79 6964 1844343 0.38 1851307 80 6813 1814956 0.37 1821769 81 6444 1785498 0.36 1791942 82 6724 1761739 0.38 1768463 83 6407 1732211 0.37 1738618 84 6286 1706560 0.37 1712846 85 6123 1684215 0.36 1690338 86 6200 1663387 0.37 1669587 87 6135 1634161 0.37 1640296 88 6096 1605960 0.38 1612056 89 5934 1586703 0.37 1592637 90 5988 1561891 0.38 1567879 91 5510 1543686 0.36 1549196 92 5698 1523687 0.37 1529385 93 5496 1495076 0.37 1500572 94 5692 1472228 0.39 1477920 95 5339 1452193 0.37 1457532 96 5317 1427631 0.37 1432948 97 5117 1411663 0.36 1416780 98 5225 1394471 0.37 1399696 99 4994 1371463 0.36 1376457 100 5137 1353862 0.38 1358999 101 5134 1328502 0.38 1333636 102 4913 1307979 0.37 1312892 103 4662 1287027 0.36 1291689 104 4721 1265802 0.37 1270523 105 4514 1246189 0.36 1250703 106 4624 1231647 0.37 1236271 107 4552 1214248 0.37 1218800 108 4355 1197345 0.36 1201700 109 4307 1181468 0.36 1185775 110 4302 1160547 0.37 1164849 111 4156 1137367 0.36 1141523 112 4157 1122112 0.37 1126269 113 4199 1107631 0.38 1111830 114 4163 1089841 0.38 1094004 115 3927 1070170 0.37 1074097 116 4002 1060204 0.38 1064206 117 3782 1039946 0.36 1043728 118 3928 1026220 0.38 1030148 119 3772 1009864 0.37 1013636 120 3816 990704 0.38 994520 121 3709 977298 0.38 981007 122 3606 959629 0.37 963235 123 3578 944902 0.38 948480 124 3608 931712 0.39 935320 125 3498 914487 0.38 917985 126 3556 899596 0.39 903152 127 3531 886363 0.40 889894 128 3352 875143 0.38 878495 129 3363 861381 0.39 864744 130 3409 842836 0.40 846245 131 3325 830381 0.40 833706 132 3327 811029 0.41 814356 133 3246 798752 0.40 801998 134 3215 783765 0.41 786980 135 2565 764781 0.33 767346 136 1391 688255 0.20 689646