CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 235347 1685342 12.25 1920689 2 217838 1557351 12.27 1775189 3 216643 1586254 12.02 1802897 4 219251 1596058 12.08 1815309 5 222624 1596156 12.24 1818780 6 224538 1643135 12.02 1867673 7 229339 1645332 12.23 1874671 8 231120 1631338 12.41 1862458 9 229609 1632795 12.33 1862404 10 232160 1633020 12.45 1865180 11 233881 1626774 12.57 1860655 12 231980 1624517 12.50 1856497 13 230464 1611162 12.51 1841626 14 232639 1645427 12.39 1878066 15 235375 1672527 12.34 1907902 16 235884 1660405 12.44 1896289 17 235450 1670623 12.35 1906073 18 233426 1664012 12.30 1897438 19 235685 1659245 12.44 1894930 20 234537 1650139 12.44 1884676 21 233220 1645618 12.41 1878838 22 231943 1635965 12.42 1867908 23 232371 1649700 12.35 1882071 24 231723 1639106 12.39 1870829 25 232490 1664586 12.26 1897076 26 234157 1676788 12.25 1910945 27 234177 1672638 12.28 1906815 28 232510 1663843 12.26 1896353 29 231041 1657154 12.24 1888195 30 230905 1648198 12.29 1879103 31 230751 1638527 12.34 1869278 32 236456 1658552 12.48 1895008 33 234502 1653552 12.42 1888054 34 233132 1650235 12.38 1883367 35 230522 1658600 12.20 1889122 36 229821 1647546 12.24 1877367 37 230582 1656993 12.22 1887575 38 228553 1645597 12.20 1874150 39 233118 1661345 12.31 1894463 40 232419 1645311 12.38 1877730 41 232522 1666415 12.24 1898937 42 228380 1645388 12.19 1873768 43 232770 1650841 12.36 1883611 44 229544 1639766 12.28 1869310 45 226718 1642396 12.13 1869114 46 224272 1630537 12.09 1854809 47 226604 1648260 12.09 1874864 48 226116 1632714 12.16 1858830 49 229089 1636725 12.28 1865814 50 225680 1617392 12.24 1843072 51 226765 1623168 12.26 1849933 52 221928 1620903 12.04 1842831 53 221333 1615036 12.05 1836369 54 223860 1621640 12.13 1845500 55 220444 1615754 12.01 1836198 56 223495 1623391 12.10 1846886 57 223601 1619248 12.13 1842849 58 219482 1608189 12.01 1827671 59 219957 1596445 12.11 1816402 60 218160 1596499 12.02 1814659 61 218799 1602261 12.01 1821060 62 220766 1612643 12.04 1833409 63 221173 1611744 12.07 1832917 64 218367 1589272 12.08 1807639 65 216075 1599809 11.90 1815884 66 216257 1589800 11.97 1806057 67 213561 1580674 11.90 1794235 68 213388 1579139 11.90 1792527 69 214423 1576501 11.97 1790924 70 211887 1559617 11.96 1771504 71 213866 1563550 12.03 1777416 72 210093 1549373 11.94 1759466 73 212540 1552874 12.04 1765414 74 210245 1558728 11.89 1768973 75 206663 1550358 11.76 1757021 76 205351 1535620 11.80 1740971 77 204572 1539861 11.73 1744433 78 204761 1524948 11.84 1729709 79 205609 1526740 11.87 1732349 80 204260 1516159 11.87 1720419 81 202117 1506450 11.83 1708567 82 200036 1501434 11.76 1701470 83 198562 1496174 11.72 1694736 84 199823 1503558 11.73 1703381 85 200271 1498109 11.79 1698380 86 198340 1495204 11.71 1693544 87 197796 1492584 11.70 1690380 88 196508 1479356 11.73 1675864 89 195073 1476187 11.67 1671260 90 192750 1465876 11.62 1658626 91 192666 1466310 11.61 1658976 92 191134 1457352 11.59 1648486 93 191691 1447612 11.69 1639303 94 189224 1436888 11.64 1626112 95 187060 1440415 11.49 1627475 96 186116 1434040 11.49 1620156 97 186461 1423374 11.58 1609835 98 184922 1417658 11.54 1602580 99 183611 1408014 11.54 1591625 100 184027 1400010 11.62 1584037 101 182677 1399168 11.55 1581845 102 178863 1377793 11.49 1556656 103 177593 1365372 11.51 1542965 104 176689 1365389 11.46 1542078 105 175669 1361723 11.43 1537392 106 173035 1352560 11.34 1525595 107 173857 1349426 11.41 1523283 108 171765 1332655 11.42 1504420 109 171293 1329465 11.41 1500758 110 169336 1316812 11.39 1486148 111 168687 1313662 11.38 1482349 112 165818 1297893 11.33 1463711 113 163873 1289318 11.28 1453191 114 163153 1276975 11.33 1440128 115 162644 1271612 11.34 1434256 116 160641 1262919 11.28 1423560 117 159581 1255530 11.28 1415111 118 158978 1246361 11.31 1405339 119 158457 1240657 11.33 1399114 120 155558 1224961 11.27 1380519 121 154325 1214866 11.27 1369191 122 151607 1201443 11.20 1353050 123 151216 1197198 11.21 1348414 124 150244 1184437 11.26 1334681 125 147616 1174820 11.16 1322436 126 144772 1162414 11.08 1307186 127 144886 1154457 11.15 1299343 128 143128 1148933 11.08 1292061 129 142457 1136287 11.14 1278744 130 140739 1124309 11.13 1265048 131 140136 1116833 11.15 1256969 132 138293 1104020 11.13 1242313 133 136242 1097801 11.04 1234043 134 133132 1085554 10.92 1218686 135 121084 1066782 10.19 1187866 136 57657 984904 5.53 1042561 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 14268 3087957 0.46 3102225 2 12588 2613613 0.48 2626201 3 11157 2500066 0.44 2511223 4 11311 2512687 0.45 2523998 5 10726 2488033 0.43 2498759 6 11276 2446875 0.46 2458151 7 10802 2486915 0.43 2497717 8 11526 2536658 0.45 2548184 9 10938 2498100 0.44 2509038 10 11235 2548361 0.44 2559596 11 10872 2576857 0.42 2587729 12 10852 2563627 0.42 2574479 13 10857 2544035 0.42 2554892 14 10823 2552576 0.42 2563399 15 10866 2531301 0.43 2542167 16 10929 2564970 0.42 2575899 17 10881 2577510 0.42 2588391 18 10880 2558444 0.42 2569324 19 10833 2585899 0.42 2596732 20 10787 2562307 0.42 2573094 21 10856 2559181 0.42 2570037 22 10860 2572682 0.42 2583542 23 10611 2555266 0.41 2565877 24 10947 2563954 0.43 2574901 25 10538 2566453 0.41 2576991 26 10908 2585263 0.42 2596171 27 10775 2557332 0.42 2568107 28 10961 2555416 0.43 2566377 29 10545 2563168 0.41 2573713 30 10834 2537469 0.43 2548303 31 10638 2571936 0.41 2582574 32 10722 2564845 0.42 2575567 33 10923 2573513 0.42 2584436 34 10716 2568328 0.42 2579044 35 10449 2549679 0.41 2560128 36 10676 2563145 0.41 2573821 37 10556 2530162 0.42 2540718 38 10512 2558144 0.41 2568656 39 10702 2543396 0.42 2554098 40 10565 2555012 0.41 2565577 41 10683 2571137 0.41 2581820 42 10713 2581536 0.41 2592249 43 10545 2544212 0.41 2554757 44 10782 2546166 0.42 2556948 45 10543 2527260 0.42 2537803 46 10552 2524687 0.42 2535239 47 10814 2527727 0.43 2538541 48 10625 2541808 0.42 2552433 49 10533 2509894 0.42 2520427 50 10620 2549612 0.41 2560232 51 10501 2510318 0.42 2520819 52 10639 2528542 0.42 2539181 53 10529 2503825 0.42 2514354 54 10665 2504552 0.42 2515217 55 10510 2484721 0.42 2495231 56 10500 2499987 0.42 2510487 57 10477 2469756 0.42 2480233 58 10436 2482556 0.42 2492992 59 10555 2488937 0.42 2499492 60 10504 2501185 0.42 2511689 61 10367 2462612 0.42 2472979 62 10660 2491187 0.43 2501847 63 10450 2464337 0.42 2474787 64 10533 2473639 0.42 2484172 65 10449 2485682 0.42 2496131 66 10240 2461651 0.41 2471891 67 10062 2447576 0.41 2457638 68 10584 2468417 0.43 2479001 69 10221 2438966 0.42 2449187 70 10403 2441882 0.42 2452285 71 10330 2439516 0.42 2449846 72 10493 2426113 0.43 2436606 73 10276 2415870 0.42 2426146 74 10103 2408098 0.42 2418201 75 10244 2384056 0.43 2394300 76 10194 2392705 0.42 2402899 77 10242 2381575 0.43 2391817 78 10277 2377049 0.43 2387326 79 10152 2363897 0.43 2374049 80 10174 2368789 0.43 2378963 81 10047 2341052 0.43 2351099 82 10058 2344597 0.43 2354655 83 9958 2330761 0.43 2340719 84 10034 2326943 0.43 2336977 85 9894 2317350 0.43 2327244 86 10268 2326728 0.44 2336996 87 9914 2297222 0.43 2307136 88 9765 2301858 0.42 2311623 89 9771 2296261 0.42 2306032 90 9867 2287230 0.43 2297097 91 9818 2267293 0.43 2277111 92 9922 2258861 0.44 2268783 93 9628 2244740 0.43 2254368 94 9860 2241538 0.44 2251398 95 9508 2225943 0.43 2235451 96 9570 2216997 0.43 2226567 97 9570 2203182 0.43 2212752 98 9584 2211652 0.43 2221236 99 9455 2188598 0.43 2198053 100 9288 2179322 0.42 2188610 101 9431 2163767 0.43 2173198 102 9531 2154767 0.44 2164298 103 9318 2132982 0.43 2142300 104 9440 2134728 0.44 2144168 105 9295 2111835 0.44 2121130 106 9255 2104787 0.44 2114042 107 9294 2090698 0.44 2099992 108 9271 2082693 0.44 2091964 109 9180 2071053 0.44 2080233 110 9170 2068337 0.44 2077507 111 9126 2039437 0.45 2048563 112 9226 2035919 0.45 2045145 113 9159 2006636 0.45 2015795 114 9075 1995341 0.45 2004416 115 9041 1975556 0.46 1984597 116 8801 1971037 0.44 1979838 117 8927 1957717 0.45 1966644 118 8967 1949119 0.46 1958086 119 8925 1935531 0.46 1944456 120 8827 1919243 0.46 1928070 121 8902 1893764 0.47 1902666 122 8670 1891027 0.46 1899697 123 8763 1861937 0.47 1870700 124 8633 1856846 0.46 1865479 125 8789 1833718 0.48 1842507 126 8845 1815146 0.48 1823991 127 8656 1794592 0.48 1803248 128 8794 1786962 0.49 1795756 129 8908 1770334 0.50 1779242 130 9003 1757719 0.51 1766722 131 9457 1747921 0.54 1757378 132 9443 1728300 0.54 1737743 133 9196 1701082 0.54 1710278 134 8739 1691485 0.51 1700224 135 7244 1644195 0.44 1651439 136 2563 1506193 0.17 1508756 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 50856 9416534 0.54 9467390 2 53743 9995004 0.53 10048747 3 48808 10064177 0.48 10112985 4 52759 10028992 0.52 10081751 5 48859 9986840 0.49 10035699 6 54705 9954986 0.55 10009691 7 49879 9897980 0.50 9947859 8 52697 9998895 0.52 10051592 9 47059 9917179 0.47 9964238 10 51116 9968305 0.51 10019421 11 46721 9914915 0.47 9961636 12 51869 9893534 0.52 9945403 13 48614 9935619 0.49 9984233 14 51993 9956685 0.52 10008678 15 47407 9923468 0.48 9970875 16 49818 9876537 0.50 9926355 17 47219 9987771 0.47 10034990 18 51165 9975769 0.51 10026934 19 48253 9984822 0.48 10033075 20 51608 9943714 0.52 9995322 21 47220 9878542 0.48 9925762 22 50867 9842869 0.51 9893736 23 45310 9862738 0.46 9908048 24 48616 9893690 0.49 9942306 25 46445 9898909 0.47 9945354 26 50773 9936266 0.51 9987039 27 47949 9979437 0.48 10027386 28 50103 9928805 0.50 9978908 29 45970 9938636 0.46 9984606 30 47965 9893982 0.48 9941947 31 44921 9851251 0.45 9896172 32 48371 9884052 0.49 9932423 33 46836 9834782 0.47 9881618 34 50050 9898384 0.50 9948434 35 45908 9900318 0.46 9946226 36 47025 9916775 0.47 9963800 37 44376 9861700 0.45 9906076 38 47172 9887333 0.47 9934505 39 45506 9863823 0.46 9909329 40 48918 9843156 0.49 9892074 41 46046 9851356 0.47 9897402 42 47337 9802527 0.48 9849864 43 43848 9802068 0.45 9845916 44 44900 9845936 0.45 9890836 45 43739 9858131 0.44 9901870 46 48613 9806186 0.49 9854799 47 45340 9815543 0.46 9860883 48 47158 9745583 0.48 9792741 49 44133 9794384 0.45 9838517 50 44841 9795304 0.46 9840145 51 42866 9803725 0.44 9846591 52 46860 9772573 0.48 9819433 53 45100 9784626 0.46 9829726 54 47470 9778058 0.48 9825528 55 43518 9720123 0.45 9763641 56 44332 9767397 0.45 9811729 57 42938 9784204 0.44 9827142 58 44946 9712679 0.46 9757625 59 43170 9781109 0.44 9824279 60 46027 9725607 0.47 9771634 61 43758 9669866 0.45 9713624 62 44478 9711934 0.46 9756412 63 42274 9648450 0.44 9690724 64 43773 9640717 0.45 9684490 65 42362 9655746 0.44 9698108 66 45391 9664447 0.47 9709838 67 43236 9653101 0.45 9696337 68 44579 9676811 0.46 9721390 69 41377 9615267 0.43 9656644 70 42708 9565222 0.44 9607930 71 41568 9592709 0.43 9634277 72 43254 9528061 0.45 9571315 73 42036 9516478 0.44 9558514 74 43696 9529443 0.46 9573139 75 40994 9464268 0.43 9505262 76 42466 9481299 0.45 9523765 77 40440 9446488 0.43 9486928 78 41874 9404659 0.44 9446533 79 40862 9417930 0.43 9458792 80 42407 9379959 0.45 9422366 81 40960 9325578 0.44 9366538 82 42064 9295130 0.45 9337194 83 38995 9244095 0.42 9283090 84 40167 9202019 0.43 9242186 85 39483 9188535 0.43 9228018 86 41164 9194993 0.45 9236157 87 40156 9146001 0.44 9186157 88 40976 9116937 0.45 9157913 89 39175 9107759 0.43 9146934 90 40169 9059069 0.44 9099238 91 38030 9045625 0.42 9083655 92 39374 9009148 0.44 9048522 93 39100 8932637 0.44 8971737 94 40679 8882565 0.46 8923244 95 38598 8846805 0.43 8885403 96 38366 8820986 0.43 8859352 97 37000 8826135 0.42 8863135 98 38514 8819076 0.43 8857590 99 37581 8772126 0.43 8809707 100 39526 8737748 0.45 8777274 101 37826 8679466 0.43 8717292 102 38279 8606851 0.44 8645130 103 36093 8538080 0.42 8574173 104 36265 8478322 0.43 8514587 105 35896 8433599 0.42 8469495 106 37237 8419193 0.44 8456430 107 36447 8405803 0.43 8442250 108 37326 8355298 0.44 8392624 109 36161 8333349 0.43 8369510 110 35268 8269854 0.42 8305122 111 35185 8203744 0.43 8238929 112 36131 8138861 0.44 8174992 113 35265 8093007 0.43 8128272 114 36549 8026323 0.45 8062872 115 34689 7947283 0.43 7981972 116 34683 7938019 0.44 7972702 117 33961 7902183 0.43 7936144 118 34812 7847906 0.44 7882718 119 34497 7808064 0.44 7842561 120 35031 7721944 0.45 7756975 121 34049 7679721 0.44 7713770 122 33874 7611769 0.44 7645643 123 33074 7527165 0.44 7560239 124 33367 7466959 0.44 7500326 125 32978 7386754 0.44 7419732 126 34119 7338352 0.46 7372471 127 33333 7287822 0.46 7321155 128 33947 7264383 0.47 7298330 129 33481 7203668 0.46 7237149 130 34021 7129027 0.47 7163048 131 34303 7071790 0.48 7106093 132 35706 6985306 0.51 7021012 133 36200 6913452 0.52 6949652 134 36656 6855123 0.53 6891779 135 27581 6749767 0.41 6777348 136 14443 6363278 0.23 6377721 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 120945 963406 11.15 1084351 2 110768 873957 11.25 984725 3 107606 875265 10.95 982871 4 108227 868831 11.08 977058 5 109235 864176 11.22 973411 6 108194 875568 11.00 983762 7 107832 865269 11.08 973101 8 108090 849608 11.29 957698 9 105914 840519 11.19 946433 10 105419 830356 11.27 935775 11 105080 817499 11.39 922579 12 102952 800640 11.39 903592 13 100341 785913 11.32 886254 14 100309 791431 11.25 891740 15 100186 795809 11.18 895995 16 99084 781019 11.26 880103 17 98186 775202 11.24 873388 18 95086 763845 11.07 858931 19 95395 751547 11.26 846942 20 92874 740405 11.15 833279 21 92020 725794 11.25 817814 22 90680 712282 11.29 802962 23 88987 704730 11.21 793717 24 87692 692200 11.24 779892 25 86596 693724 11.10 780320 26 86014 691090 11.07 777104 27 85147 683345 11.08 768492 28 83477 668797 11.10 752274 29 82037 657845 11.09 739882 30 80549 647750 11.06 728299 31 79289 633414 11.13 712703 32 79872 631611 11.23 711483 33 78110 618730 11.21 696840 34 76142 606702 11.15 682844 35 74958 607767 10.98 682725 36 73481 594042 11.01 667523 37 72723 591310 10.95 664033 38 72051 579897 11.05 651948 39 71544 575154 11.06 646698 40 71340 563618 11.24 634958 41 69969 562341 11.07 632310 42 68161 546354 11.09 614515 43 67549 540559 11.11 608108 44 66265 530284 11.11 596549 45 63953 524194 10.87 588147 46 63530 513156 11.02 576686 47 62249 513113 10.82 575362 48 61525 501633 10.92 563158 49 61815 497054 11.06 558869 50 59135 484180 10.88 543315 51 59103 478691 10.99 537794 52 57620 471789 10.88 529409 53 56407 462456 10.87 518863 54 56243 456598 10.97 512841 55 54253 450316 10.75 504569 56 54256 445120 10.86 499376 57 53556 439368 10.86 492924 58 51433 431371 10.65 482804 59 50979 423239 10.75 474218 60 50520 417779 10.79 468299 61 49853 412646 10.78 462499 62 49448 409585 10.77 459033 63 49694 403422 10.97 453116 64 47891 392245 10.88 440136 65 46569 387633 10.73 434202 66 46015 382081 10.75 428096 67 44780 374811 10.67 419591 68 44597 369661 10.77 414258 69 44083 364582 10.79 408665 70 42803 356628 10.72 399431 71 42725 354593 10.75 397318 72 41253 346193 10.65 387446 73 41243 341991 10.76 383234 74 40474 338317 10.69 378791 75 39324 330782 10.63 370106 76 38396 324004 10.59 362400 77 37837 321673 10.52 359510 78 37381 314045 10.64 351426 79 37209 310652 10.70 347861 80 36668 306091 10.70 342759 81 35478 299963 10.58 335441 82 35069 295221 10.62 330290 83 34010 290846 10.47 324856 84 33975 289146 10.51 323121 85 34224 284160 10.75 318384 86 32889 280494 10.49 313383 87 32530 275988 10.54 308518 88 31894 271057 10.53 302951 89 30940 266572 10.40 297512 90 31018 262793 10.56 293811 91 29934 260312 10.31 290246 92 30061 255621 10.52 285682 93 29712 250881 10.59 280593 94 28586 246778 10.38 275364 95 28189 244335 10.34 272524 96 27548 239093 10.33 266641 97 27189 234761 10.38 261950 98 26897 231148 10.42 258045 99 26194 228511 10.28 254705 100 26061 224387 10.41 250448 101 25453 222360 10.27 247813 102 24836 216280 10.30 241116 103 24695 212831 10.40 237526 104 24086 210528 10.27 234614 105 23630 207461 10.23 231091 106 23351 204461 10.25 227812 107 23065 201679 10.26 224744 108 22527 197427 10.24 219954 109 22202 194941 10.22 217143 110 21660 191387 10.17 213047 111 21030 188978 10.01 210008 112 20808 184558 10.13 205366 113 20607 181656 10.19 202263 114 20438 179973 10.20 200411 115 20175 176453 10.26 196628 116 19603 173656 10.14 193259 117 19177 170702 10.10 189879 118 19026 167051 10.22 186077 119 18776 164876 10.22 183652 120 18422 162126 10.20 180548 121 17809 159594 10.04 177403 122 17454 155510 10.09 172964 123 17127 155131 9.94 172258 124 17039 151686 10.10 168725 125 16568 149469 9.98 166037 126 16125 146686 9.90 162811 127 15936 143454 10.00 159390 128 15820 141505 10.06 157325 129 15404 139343 9.95 154747 130 14965 137102 9.84 152067 131 14813 134933 9.89 149746 132 14424 131797 9.86 146221 133 14028 130887 9.68 144915 134 13763 127193 9.76 140956 135 12131 123473 8.95 135604 136 6090 106598 5.40 112688 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 8363 1764813 0.47 1773176 2 7089 1469625 0.48 1476714 3 6042 1379718 0.44 1385760 4 6051 1366335 0.44 1372386 5 5918 1339722 0.44 1345640 6 5930 1297165 0.46 1303095 7 5858 1307574 0.45 1313432 8 5915 1312706 0.45 1318621 9 5621 1280072 0.44 1285693 10 5853 1295045 0.45 1300898 11 5630 1292580 0.43 1298210 12 5473 1272816 0.43 1278289 13 5052 1243053 0.40 1248105 14 5256 1227101 0.43 1232357 15 5056 1200357 0.42 1205413 16 5150 1199922 0.43 1205072 17 4960 1193757 0.41 1198717 18 4854 1167417 0.41 1172271 19 5022 1166079 0.43 1171101 20 4700 1146719 0.41 1151419 21 4703 1129740 0.41 1134443 22 4533 1120748 0.40 1125281 23 4480 1096202 0.41 1100682 24 4566 1086168 0.42 1090734 25 4447 1073083 0.41 1077530 26 4275 1062071 0.40 1066346 27 4248 1039056 0.41 1043304 28 4233 1020845 0.41 1025078 29 4151 1014976 0.41 1019127 30 4012 992751 0.40 996763 31 4062 993064 0.41 997126 32 3899 974030 0.40 977929 33 3890 966069 0.40 969959 34 3811 951653 0.40 955464 35 3734 927704 0.40 931438 36 3825 920473 0.41 924298 37 3612 896910 0.40 900522 38 3506 894092 0.39 897598 39 3610 879753 0.41 883363 40 3642 871937 0.42 875579 41 3412 865384 0.39 868796 42 3386 858629 0.39 862015 43 3450 836225 0.41 839675 44 3425 822158 0.41 825583 45 3189 807047 0.39 810236 46 3128 791291 0.39 794419 47 3149 781876 0.40 785025 48 3142 774538 0.40 777680 49 2990 755573 0.39 758563 50 2978 757831 0.39 760809 51 2888 738994 0.39 741882 52 3051 733993 0.41 737044 53 2845 715366 0.40 718211 54 2815 706365 0.40 709180 55 2802 691615 0.40 694417 56 2737 681867 0.40 684604 57 2700 665612 0.40 668312 58 2610 661536 0.39 664146 59 2706 652386 0.41 655092 60 2699 648861 0.41 651560 61 2479 630925 0.39 633404 62 2636 631192 0.42 633828 63 2447 616245 0.40 618692 64 2357 607557 0.39 609914 65 2361 602406 0.39 604767 66 2344 588446 0.40 590790 67 2287 578749 0.39 581036 68 2284 573983 0.40 576267 69 2265 561539 0.40 563804 70 2289 553278 0.41 555567 71 2173 547123 0.40 549296 72 2193 536720 0.41 538913 73 2139 529293 0.40 531432 74 2115 519097 0.41 521212 75 2013 507724 0.39 509737 76 1971 504620 0.39 506591 77 2071 494619 0.42 496690 78 1887 484760 0.39 486647 79 1875 477351 0.39 479226 80 1979 472043 0.42 474022 81 1941 463076 0.42 465017 82 1809 456783 0.39 458592 83 1750 449484 0.39 451234 84 1730 443747 0.39 445477 85 1800 436120 0.41 437920 86 1717 432028 0.40 433745 87 1739 420008 0.41 421747 88 1632 414992 0.39 416624 89 1671 408532 0.41 410203 90 1669 403604 0.41 405273 91 1661 397024 0.42 398685 92 1607 390739 0.41 392346 93 1515 383333 0.39 384848 94 1523 381182 0.40 382705 95 1519 373647 0.40 375166 96 1439 365685 0.39 367124 97 1456 359409 0.40 360865 98 1540 357372 0.43 358912 99 1460 348428 0.42 349888 100 1450 344520 0.42 345970 101 1383 338719 0.41 340102 102 1378 333865 0.41 335243 103 1356 327350 0.41 328706 104 1341 324057 0.41 325398 105 1331 317758 0.42 319089 106 1222 311973 0.39 313195 107 1281 308365 0.41 309646 108 1243 302242 0.41 303485 109 1175 298429 0.39 299604 110 1216 293922 0.41 295138 111 1219 288000 0.42 289219 112 1220 284695 0.43 285915 113 1229 280111 0.44 281340 114 1160 275454 0.42 276614 115 1116 268673 0.41 269789 116 1174 266637 0.44 267811 117 1083 262817 0.41 263900 118 1042 255994 0.41 257036 119 1066 252857 0.42 253923 120 1079 248935 0.43 250014 121 1032 243416 0.42 244448 122 1065 240530 0.44 241595 123 1048 235122 0.44 236170 124 988 232349 0.42 233337 125 1048 228753 0.46 229801 126 960 225247 0.42 226207 127 1023 220806 0.46 221829 128 983 217449 0.45 218432 129 918 212050 0.43 212968 130 935 209026 0.45 209961 131 984 205736 0.48 206720 132 1006 201440 0.50 202446 133 863 197531 0.43 198394 134 795 194589 0.41 195384 135 652 184567 0.35 185219 136 303 158064 0.19 158367 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 28498 5588683 0.51 5617181 2 28215 5854386 0.48 5882601 3 26487 5824433 0.45 5850920 4 27029 5736358 0.47 5763387 5 26173 5635404 0.46 5661577 6 26870 5558109 0.48 5584979 7 25316 5466154 0.46 5491470 8 25246 5468779 0.46 5494025 9 23326 5378435 0.43 5401761 10 23922 5357364 0.44 5381286 11 22652 5274186 0.43 5296838 12 23418 5208682 0.45 5232100 13 22531 5161964 0.43 5184495 14 23064 5107917 0.45 5130981 15 21359 5024332 0.42 5045691 16 21543 4940371 0.43 4961914 17 20749 4931898 0.42 4952647 18 21173 4871510 0.43 4892683 19 20812 4822355 0.43 4843167 20 20868 4750860 0.44 4771728 21 19671 4672200 0.42 4691871 22 19926 4607946 0.43 4627872 23 18372 4556311 0.40 4574683 24 18704 4511140 0.41 4529844 25 18616 4450329 0.42 4468945 26 18861 4401027 0.43 4419888 27 18291 4368808 0.42 4387099 28 18396 4293727 0.43 4312123 29 17194 4241588 0.40 4258782 30 17375 4181397 0.41 4198772 31 16643 4114111 0.40 4130754 32 16852 4081967 0.41 4098819 33 16149 4013090 0.40 4029239 34 17076 3977836 0.43 3994912 35 15917 3919977 0.40 3935894 36 15726 3868965 0.40 3884691 37 14965 3796524 0.39 3811489 38 15477 3755576 0.41 3771053 39 15166 3700257 0.41 3715423 40 15326 3640683 0.42 3656009 41 14882 3603965 0.41 3618847 42 14467 3545979 0.41 3560446 43 13796 3504530 0.39 3518326 44 13845 3475235 0.40 3489080 45 13551 3424855 0.39 3438406 46 13988 3356703 0.41 3370691 47 13571 3307457 0.41 3321028 48 13596 3241107 0.42 3254703 49 12995 3209848 0.40 3222843 50 12653 3170820 0.40 3183473 51 12239 3143449 0.39 3155688 52 12788 3095704 0.41 3108492 53 12347 3059183 0.40 3071530 54 12332 3014000 0.41 3026332 55 11920 2955590 0.40 2967510 56 11739 2920805 0.40 2932544 57 11475 2884783 0.40 2896258 58 11366 2826665 0.40 2838031 59 11023 2802144 0.39 2813167 60 11583 2753242 0.42 2764825 61 11034 2705140 0.41 2716174 62 10971 2689853 0.41 2700824 63 10572 2636941 0.40 2647513 64 10600 2596421 0.41 2607021 65 10209 2567857 0.40 2578066 66 10579 2530011 0.42 2540590 67 9959 2489954 0.40 2499913 68 9987 2463899 0.40 2473886 69 9770 2411298 0.40 2421068 70 9611 2372389 0.40 2382000 71 9399 2352051 0.40 2361450 72 9494 2308893 0.41 2318387 73 9121 2281701 0.40 2290822 74 9282 2256299 0.41 2265581 75 8919 2211096 0.40 2220015 76 8853 2181049 0.40 2189902 77 8484 2143167 0.39 2151651 78 8556 2103085 0.41 2111641 79 8404 2078341 0.40 2086745 80 8324 2048298 0.40 2056622 81 8164 2013725 0.40 2021889 82 8157 1986728 0.41 1994885 83 7772 1950730 0.40 1958502 84 7839 1923925 0.41 1931764 85 7686 1898582 0.40 1906268 86 7494 1875347 0.40 1882841 87 7413 1838666 0.40 1846079 88 7518 1805310 0.41 1812828 89 7083 1783341 0.40 1790424 90 7237 1754285 0.41 1761522 91 6814 1730671 0.39 1737485 92 6803 1708126 0.40 1714929 93 6783 1678630 0.40 1685413 94 6861 1648463 0.41 1655324 95 6484 1626421 0.40 1632905 96 6553 1600561 0.41 1607114 97 6316 1582680 0.40 1588996 98 6392 1560093 0.41 1566485 99 6139 1532708 0.40 1538847 100 6283 1511742 0.41 1518025 101 5897 1487190 0.39 1493087 102 5970 1461288 0.41 1467258 103 5648 1438351 0.39 1443999 104 5573 1411865 0.39 1417438 105 5507 1390036 0.39 1395543 106 5684 1373742 0.41 1379426 107 5513 1355734 0.40 1361247 108 5358 1331581 0.40 1336939 109 5265 1315565 0.40 1320830 110 5168 1292831 0.40 1297999 111 5117 1266826 0.40 1271943 112 5070 1245990 0.41 1251060 113 5014 1231853 0.41 1236867 114 4907 1208878 0.40 1213785 115 4838 1186192 0.41 1191030 116 4721 1173425 0.40 1178146 117 4787 1156446 0.41 1161233 118 4728 1137214 0.41 1141942 119 4654 1118312 0.41 1122966 120 4655 1094629 0.42 1099284 121 4446 1080001 0.41 1084447 122 4539 1061606 0.43 1066145 123 4377 1042735 0.42 1047112 124 4368 1025501 0.42 1029869 125 4217 1009232 0.42 1013449 126 4235 993539 0.42 997774 127 4125 975823 0.42 979948 128 4113 964516 0.42 968629 129 4119 949477 0.43 953596 130 4070 925554 0.44 929624 131 3999 912581 0.44 916580 132 4087 893015 0.46 897102 133 3963 876916 0.45 880879 134 3820 861573 0.44 865393 135 3124 839824 0.37 842948 136 1703 752962 0.23 754665