CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 260051 1592690 14.04 1852741 2 244902 1471991 14.26 1716893 3 244299 1494638 14.05 1738937 4 246411 1510082 14.03 1756493 5 250777 1499833 14.33 1750610 6 251342 1550200 13.95 1801542 7 256770 1548065 14.23 1804835 8 257495 1535287 14.36 1792782 9 257453 1543576 14.29 1801029 10 258462 1541355 14.36 1799817 11 260434 1544557 14.43 1804991 12 259257 1534642 14.45 1793899 13 257418 1526102 14.43 1783520 14 261975 1557413 14.40 1819388 15 264466 1573746 14.39 1838212 16 263176 1561930 14.42 1825106 17 263602 1576462 14.33 1840064 18 259949 1566115 14.24 1826064 19 262735 1561780 14.40 1824515 20 261951 1564293 14.34 1826244 21 262594 1554803 14.45 1817397 22 259844 1554444 14.32 1814288 23 261202 1564604 14.31 1825806 24 259954 1549564 14.37 1809518 25 259977 1575134 14.17 1835111 26 260386 1580827 14.14 1841213 27 262366 1573586 14.29 1835952 28 258511 1565642 14.17 1824153 29 259066 1563837 14.21 1822903 30 257443 1557612 14.18 1815055 31 256960 1549086 14.23 1806046 32 262997 1570222 14.35 1833219 33 259946 1568898 14.21 1828844 34 258873 1562986 14.21 1821859 35 258193 1565296 14.16 1823489 36 254921 1554738 14.09 1809659 37 255068 1561110 14.04 1816178 38 253764 1553498 14.04 1807262 39 257727 1564726 14.14 1822453 40 257085 1550517 14.22 1807602 41 259537 1571661 14.17 1831198 42 253503 1548760 14.07 1802263 43 256663 1553867 14.18 1810530 44 253810 1547524 14.09 1801334 45 251742 1547566 13.99 1799308 46 249611 1537178 13.97 1786789 47 249361 1551434 13.85 1800795 48 250345 1531554 14.05 1781899 49 252956 1531373 14.18 1784329 50 247449 1518142 14.02 1765591 51 248447 1521149 14.04 1769596 52 244459 1521276 13.84 1765735 53 243078 1523514 13.76 1766592 54 244776 1519773 13.87 1764549 55 241660 1516294 13.75 1757954 56 245068 1519032 13.89 1764100 57 244163 1515711 13.87 1759874 58 240994 1499275 13.85 1740269 59 240115 1490378 13.88 1730493 60 236871 1486353 13.75 1723224 61 239167 1494136 13.80 1733303 62 240286 1502661 13.79 1742947 63 240103 1502489 13.78 1742592 64 237278 1479000 13.83 1716278 65 236192 1485466 13.72 1721658 66 236981 1475877 13.84 1712858 67 233060 1463793 13.73 1696853 68 231317 1463626 13.65 1694943 69 233198 1459429 13.78 1692627 70 228897 1439634 13.72 1668531 71 229191 1441848 13.72 1671039 72 226164 1425542 13.69 1651706 73 227958 1426719 13.78 1654677 74 226100 1430637 13.65 1656737 75 221887 1421621 13.50 1643508 76 220302 1408066 13.53 1628368 77 218967 1410495 13.44 1629462 78 218797 1392673 13.58 1611470 79 217803 1390896 13.54 1608699 80 216158 1381084 13.53 1597242 81 213363 1371313 13.46 1584676 82 211684 1360139 13.47 1571823 83 209114 1355066 13.37 1564180 84 208829 1357671 13.33 1566500 85 208906 1350536 13.40 1559442 86 207306 1349526 13.32 1556832 87 207106 1340986 13.38 1548092 88 205005 1323925 13.41 1528930 89 202003 1321819 13.26 1523822 90 200173 1308286 13.27 1508459 91 199713 1307508 13.25 1507221 92 198112 1296190 13.26 1494302 93 197649 1283028 13.35 1480677 94 192900 1273808 13.15 1466708 95 192870 1269998 13.18 1462868 96 191398 1261907 13.17 1453305 97 189737 1250468 13.17 1440205 98 188248 1246089 13.12 1434337 99 185141 1233877 13.05 1419018 100 184813 1218229 13.17 1403042 101 184089 1219394 13.12 1403483 102 179863 1196338 13.07 1376201 103 176668 1181541 13.01 1358209 104 176045 1179509 12.99 1355554 105 175454 1173669 13.01 1349123 106 172651 1160624 12.95 1333275 107 170769 1156491 12.87 1327260 108 168480 1139385 12.88 1307865 109 168162 1136517 12.89 1304679 110 165126 1119463 12.85 1284589 111 163429 1113586 12.80 1277015 112 162034 1098657 12.85 1260691 113 160441 1087999 12.85 1248440 114 157289 1073536 12.78 1230825 115 156333 1064263 12.81 1220596 116 154576 1057217 12.76 1211793 117 153371 1047293 12.77 1200664 118 151054 1032321 12.76 1183375 119 150730 1027057 12.80 1177787 120 146660 1010270 12.68 1156930 121 146901 999993 12.81 1146894 122 142992 983967 12.69 1126959 123 142451 974231 12.76 1116682 124 140089 963449 12.69 1103538 125 137240 955190 12.56 1092430 126 135098 939641 12.57 1074739 127 133501 932492 12.52 1065993 128 132196 925156 12.50 1057352 129 130926 911875 12.56 1042801 130 128950 899254 12.54 1028204 131 127904 890735 12.56 1018639 132 125589 875516 12.55 1001105 133 124029 866778 12.52 990807 134 120883 855363 12.38 976246 135 109059 834745 11.56 943804 136 51930 769248 6.32 821178 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 12480 2940322 0.42 2952802 2 11001 2495269 0.44 2506270 3 9658 2392398 0.40 2402056 4 9648 2410306 0.40 2419954 5 9237 2387115 0.39 2396352 6 9640 2346243 0.41 2355883 7 9405 2369867 0.40 2379272 8 9815 2426327 0.40 2436142 9 9305 2387710 0.39 2397015 10 9571 2441355 0.39 2450926 11 9392 2470350 0.38 2479742 12 9452 2460256 0.38 2469708 13 8934 2434264 0.37 2443198 14 9409 2441589 0.38 2450998 15 9221 2421232 0.38 2430453 16 9436 2452771 0.38 2462207 17 9391 2464680 0.38 2474071 18 9166 2443706 0.37 2452872 19 9324 2471354 0.38 2480678 20 9303 2450723 0.38 2460026 21 9169 2451008 0.37 2460177 22 9236 2462587 0.37 2471823 23 9087 2447356 0.37 2456443 24 9107 2458578 0.37 2467685 25 9297 2457898 0.38 2467195 26 9444 2477777 0.38 2487221 27 9307 2446744 0.38 2456051 28 9182 2447538 0.37 2456720 29 9232 2452506 0.38 2461738 30 9100 2428156 0.37 2437256 31 9129 2452891 0.37 2462020 32 9062 2447875 0.37 2456937 33 9208 2460390 0.37 2469598 34 9321 2459409 0.38 2468730 35 8868 2440661 0.36 2449529 36 9059 2446357 0.37 2455416 37 9033 2411070 0.37 2420103 38 9076 2442286 0.37 2451362 39 9106 2421584 0.37 2430690 40 9300 2441138 0.38 2450438 41 9075 2453777 0.37 2462852 42 9155 2459528 0.37 2468683 43 8937 2426239 0.37 2435176 44 9209 2432584 0.38 2441793 45 9021 2404744 0.37 2413765 46 8904 2403221 0.37 2412125 47 8902 2409589 0.37 2418491 48 9281 2414756 0.38 2424037 49 8978 2389115 0.37 2398093 50 8932 2425127 0.37 2434059 51 8785 2383520 0.37 2392305 52 9185 2400080 0.38 2409265 53 8849 2375624 0.37 2384473 54 9123 2378669 0.38 2387792 55 8667 2350266 0.37 2358933 56 9012 2374158 0.38 2383170 57 8805 2336660 0.38 2345465 58 8931 2351843 0.38 2360774 59 8954 2351873 0.38 2360827 60 9203 2361240 0.39 2370443 61 8878 2322033 0.38 2330911 62 8772 2348119 0.37 2356891 63 8949 2319747 0.38 2328696 64 8751 2326763 0.37 2335514 65 8760 2333047 0.37 2341807 66 8888 2311171 0.38 2320059 67 8941 2295048 0.39 2303989 68 8714 2316770 0.37 2325484 69 8621 2280405 0.38 2289026 70 8557 2284603 0.37 2293160 71 8794 2270833 0.39 2279627 72 8738 2255141 0.39 2263879 73 8459 2247262 0.38 2255721 74 8623 2238863 0.38 2247486 75 8562 2213703 0.39 2222265 76 8488 2216915 0.38 2225403 77 8456 2205540 0.38 2213996 78 8481 2202935 0.38 2211416 79 8422 2181468 0.38 2189890 80 8472 2185379 0.39 2193851 81 8460 2150547 0.39 2159007 82 8254 2151685 0.38 2159939 83 8270 2135071 0.39 2143341 84 8117 2126132 0.38 2134249 85 8225 2117545 0.39 2125770 86 8080 2121314 0.38 2129394 87 8044 2087499 0.38 2095543 88 8151 2086492 0.39 2094643 89 8132 2083778 0.39 2091910 90 7962 2065359 0.38 2073321 91 8104 2048597 0.39 2056701 92 7938 2032385 0.39 2040323 93 7979 2013503 0.39 2021482 94 7852 2008464 0.39 2016316 95 7861 1987335 0.39 1995196 96 7771 1979127 0.39 1986898 97 7615 1957810 0.39 1965425 98 7811 1966108 0.40 1973919 99 7641 1940354 0.39 1947995 100 7677 1926647 0.40 1934324 101 7615 1910796 0.40 1918411 102 7554 1890820 0.40 1898374 103 7458 1874260 0.40 1881718 104 7436 1865986 0.40 1873422 105 7275 1841530 0.39 1848805 106 7520 1830291 0.41 1837811 107 7113 1816662 0.39 1823775 108 7179 1803984 0.40 1811163 109 7293 1788568 0.41 1795861 110 7261 1787501 0.40 1794762 111 7064 1751752 0.40 1758816 112 7343 1741565 0.42 1748908 113 7227 1709218 0.42 1716445 114 7134 1699735 0.42 1706869 115 6843 1671107 0.41 1677950 116 7023 1669063 0.42 1676086 117 6862 1651481 0.41 1658343 118 6884 1639724 0.42 1646608 119 6893 1620329 0.42 1627222 120 6890 1607849 0.43 1614739 121 6835 1575139 0.43 1581974 122 6789 1570239 0.43 1577028 123 6861 1538512 0.44 1545373 124 6841 1528388 0.45 1535229 125 6697 1507962 0.44 1514659 126 6694 1482702 0.45 1489396 127 6660 1462012 0.45 1468672 128 6886 1452615 0.47 1459501 129 6899 1430541 0.48 1437440 130 7250 1419750 0.51 1427000 131 7469 1407694 0.53 1415163 132 7696 1386461 0.55 1394157 133 7620 1361290 0.56 1368910 134 7360 1347790 0.54 1355150 135 5990 1302963 0.46 1308953 136 2153 1181505 0.18 1183658 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 47114 8597466 0.55 8644580 2 49803 9139807 0.54 9189610 3 43700 9204255 0.47 9247955 4 48550 9195182 0.53 9243732 5 44793 9153556 0.49 9198349 6 52793 9127330 0.58 9180123 7 46540 9068767 0.51 9115307 8 49814 9157035 0.54 9206849 9 42316 9078999 0.46 9121315 10 46140 9098246 0.50 9144386 11 41708 9054649 0.46 9096357 12 48743 9017185 0.54 9065928 13 45835 9055425 0.50 9101260 14 49705 9085547 0.54 9135252 15 43008 9072747 0.47 9115755 16 44698 9021726 0.49 9066424 17 41202 9112640 0.45 9153842 18 46742 9092348 0.51 9139090 19 45308 9097330 0.50 9142638 20 49329 9054905 0.54 9104234 21 43910 8989399 0.49 9033309 22 45707 8961757 0.51 9007464 23 39721 8983811 0.44 9023532 24 44552 9005335 0.49 9049887 25 42189 9011091 0.47 9053280 26 47806 9057256 0.53 9105062 27 44592 9109746 0.49 9154338 28 46118 9037501 0.51 9083619 29 39820 9043724 0.44 9083544 30 43050 8997777 0.48 9040827 31 40050 8952199 0.45 8992249 32 45250 8981264 0.50 9026514 33 43022 8931116 0.48 8974138 34 46435 8994672 0.51 9041107 35 41007 9004984 0.45 9045991 36 41711 9015008 0.46 9056719 37 38617 8957479 0.43 8996096 38 42858 8984021 0.47 9026879 39 41725 8962610 0.46 9004335 40 45414 8937171 0.51 8982585 41 41179 8939547 0.46 8980726 42 41778 8887351 0.47 8929129 43 38454 8879846 0.43 8918300 44 40169 8925655 0.45 8965824 45 39964 8932531 0.45 8972495 46 44008 8892548 0.49 8936556 47 41468 8897317 0.46 8938785 48 42264 8831865 0.48 8874129 49 38405 8873049 0.43 8911454 50 38577 8866854 0.43 8905431 51 37767 8869648 0.42 8907415 52 41991 8824771 0.47 8866762 53 41133 8839147 0.46 8880280 54 42608 8825727 0.48 8868335 55 38073 8769857 0.43 8807930 56 37610 8819097 0.42 8856707 57 37005 8836616 0.42 8873621 58 39301 8754682 0.45 8793983 59 39476 8809011 0.45 8848487 60 41234 8753108 0.47 8794342 61 38057 8698293 0.44 8736350 62 38080 8733799 0.43 8771879 63 36317 8659596 0.42 8695913 64 37043 8640607 0.43 8677650 65 37117 8656178 0.43 8693295 66 39621 8651737 0.46 8691358 67 38693 8645130 0.45 8683823 68 37956 8649939 0.44 8687895 69 35623 8587209 0.41 8622832 70 35922 8531707 0.42 8567629 71 35177 8550933 0.41 8586110 72 37151 8482340 0.44 8519491 73 37318 8460724 0.44 8498042 74 37849 8459349 0.45 8497198 75 34623 8387141 0.41 8421764 76 35021 8397684 0.42 8432705 77 33552 8371400 0.40 8404952 78 35559 8311342 0.43 8346901 79 35431 8310491 0.42 8345922 80 36473 8266812 0.44 8303285 81 34460 8197309 0.42 8231769 82 34249 8154286 0.42 8188535 83 32443 8101055 0.40 8133498 84 32678 8047677 0.40 8080355 85 33083 8016682 0.41 8049765 86 34575 8015054 0.43 8049629 87 33959 7966107 0.42 8000066 88 33418 7925137 0.42 7958555 89 31566 7901235 0.40 7932801 90 32417 7849852 0.41 7882269 91 31251 7823791 0.40 7855042 92 32391 7762016 0.42 7794407 93 32572 7687745 0.42 7720317 94 32823 7622248 0.43 7655071 95 30811 7581658 0.40 7612469 96 30749 7540624 0.41 7571373 97 29607 7538036 0.39 7567643 98 30976 7518666 0.41 7549642 99 30964 7461763 0.41 7492727 100 31919 7410276 0.43 7442195 101 30509 7341716 0.41 7372225 102 29520 7259179 0.41 7288699 103 28734 7168225 0.40 7196959 104 28535 7122073 0.40 7150608 105 28490 7053837 0.40 7082327 106 29790 7034428 0.42 7064218 107 29268 7005530 0.42 7034798 108 28645 6949997 0.41 6978642 109 28098 6915371 0.40 6943469 110 27202 6844838 0.40 6872040 111 27286 6764853 0.40 6792139 112 27948 6687549 0.42 6715497 113 27964 6630245 0.42 6658209 114 28197 6556578 0.43 6584775 115 27053 6474544 0.42 6501597 116 26732 6449542 0.41 6476274 117 25905 6405952 0.40 6431857 118 26418 6351100 0.41 6377518 119 26462 6299087 0.42 6325549 120 27109 6210792 0.43 6237901 121 26467 6152116 0.43 6178583 122 25885 6075765 0.42 6101650 123 25191 5999321 0.42 6024512 124 25511 5922367 0.43 5947878 125 25548 5843650 0.44 5869198 126 26050 5782569 0.45 5808619 127 25887 5724138 0.45 5750025 128 25493 5687766 0.45 5713259 129 25528 5624783 0.45 5650311 130 26499 5551193 0.48 5577692 131 26777 5491809 0.49 5518586 132 27874 5400296 0.51 5428170 133 29312 5322223 0.55 5351535 134 29446 5260237 0.56 5289683 135 22301 5156608 0.43 5178909 136 10901 4833443 0.23 4844344 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 101237 713293 12.43 814530 2 92776 645410 12.57 738186 3 90874 642448 12.39 733322 4 90121 637971 12.38 728092 5 90394 627147 12.60 717541 6 88808 634420 12.28 723228 7 89233 625818 12.48 715051 8 88059 609780 12.62 697839 9 86760 602917 12.58 689677 10 85030 593537 12.53 678567 11 84242 584656 12.59 668898 12 82586 569073 12.67 651659 13 81090 557470 12.70 638560 14 80421 559135 12.57 639556 15 80103 557693 12.56 637796 16 78608 544705 12.61 623313 17 77496 539520 12.56 617016 18 74947 528945 12.41 603892 19 74507 518444 12.57 592951 20 72647 510347 12.46 582994 21 71898 499818 12.58 571716 22 70181 489024 12.55 559205 23 68941 483157 12.49 552098 24 67830 470647 12.60 538477 25 66398 468392 12.42 534790 26 64897 464692 12.25 529589 27 65063 456680 12.47 521743 28 62570 447332 12.27 509902 29 61863 438502 12.36 500365 30 60556 428247 12.39 488803 31 58738 418467 12.31 477205 32 60047 416481 12.60 476528 33 57354 407840 12.33 465194 34 56282 398403 12.38 454685 35 55342 394205 12.31 449547 36 53535 384689 12.22 438224 37 52893 380503 12.20 433396 38 51684 373994 12.14 425678 39 51802 371325 12.24 423127 40 50861 359407 12.40 410268 41 50533 358395 12.36 408928 42 48240 347961 12.18 396201 43 48166 343862 12.29 392028 44 47022 335151 12.30 382173 45 45886 330291 12.20 376177 46 44434 321026 12.16 365460 47 43738 320097 12.02 363835 48 42994 310240 12.17 353234 49 42891 306639 12.27 349530 50 41385 297991 12.19 339376 51 40663 294964 12.12 335627 52 39459 288177 12.04 327636 53 38856 284255 12.03 323111 54 38125 278568 12.04 316693 55 37022 272428 11.96 309450 56 36942 269486 12.06 306428 57 36089 263272 12.06 299361 58 34924 258749 11.89 293673 59 34122 252062 11.92 286184 60 33432 247826 11.89 281258 61 33578 243924 12.10 277502 62 33167 243087 12.01 276254 63 32444 237148 12.03 269592 64 31373 229808 12.01 261181 65 30739 226903 11.93 257642 66 30360 222316 12.02 252676 67 29470 217308 11.94 246778 68 28391 213528 11.74 241919 69 28818 210626 12.04 239444 70 27584 205453 11.84 233037 71 27705 202746 12.02 230451 72 26523 197103 11.86 223626 73 26592 193985 12.06 220577 74 26048 192267 11.93 218315 75 24774 186156 11.75 210930 76 24303 183517 11.69 207820 77 23829 179801 11.70 203630 78 23605 175857 11.83 199462 79 23147 174128 11.73 197275 80 22729 169558 11.82 192287 81 22037 165690 11.74 187727 82 21335 161949 11.64 183284 83 21013 158700 11.69 179713 84 20687 157447 11.61 178134 85 20411 154729 11.65 175140 86 20255 151567 11.79 171822 87 19794 148334 11.77 168128 88 19613 145338 11.89 164951 89 18601 142032 11.58 160633 90 18282 139139 11.61 157421 91 18094 138610 11.55 156704 92 17894 134845 11.72 152739 93 17646 133017 11.71 150663 94 16926 129803 11.54 146729 95 16903 127844 11.68 144747 96 16413 125100 11.60 141513 97 15990 122042 11.58 138032 98 15326 120311 11.30 135637 99 15220 117763 11.45 132983 100 14902 115233 11.45 130135 101 14709 114185 11.41 128894 102 14151 110967 11.31 125118 103 13726 107819 11.29 121545 104 13750 106902 11.40 120652 105 13449 105476 11.31 118925 106 13183 102449 11.40 115632 107 13119 101287 11.47 114406 108 12648 98497 11.38 111145 109 12428 97312 11.32 109740 110 11976 94920 11.20 106896 111 11544 93547 10.98 105091 112 11628 91630 11.26 103258 113 11473 89585 11.35 101058 114 11126 87942 11.23 99068 115 10794 86366 11.11 97160 116 10742 84238 11.31 94980 117 10543 82471 11.33 93014 118 10080 80968 11.07 91048 119 10255 80013 11.36 90268 120 9793 77026 11.28 86819 121 9605 76651 11.14 86256 122 9360 74876 11.11 84236 123 9193 73944 11.06 83137 124 8996 71901 11.12 80897 125 8765 70457 11.06 79222 126 8555 68815 11.06 77370 127 8331 67290 11.02 75621 128 8068 66394 10.84 74462 129 7952 65144 10.88 73096 130 7655 63353 10.78 71008 131 7703 62705 10.94 70408 132 7261 60829 10.66 68090 133 7280 59642 10.88 66922 134 6946 58500 10.61 65446 135 6223 56643 9.90 62866 136 3102 48789 5.98 51891 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 5844 1314604 0.44 1320448 2 5137 1091902 0.47 1097039 3 4199 1023088 0.41 1027287 4 4187 1012067 0.41 1016254 5 3993 986375 0.40 990368 6 3956 955425 0.41 959381 7 3844 953044 0.40 956888 8 3845 958133 0.40 961978 9 3702 929941 0.40 933643 10 3805 938432 0.40 942237 11 3634 932513 0.39 936147 12 3643 916051 0.40 919694 13 3379 888265 0.38 891644 14 3509 873903 0.40 877412 15 3324 850596 0.39 853920 16 3229 847123 0.38 850352 17 3039 839896 0.36 842935 18 3040 818712 0.37 821752 19 3095 813524 0.38 816619 20 2983 797093 0.37 800076 21 2936 783686 0.37 786622 22 2856 774136 0.37 776992 23 2793 753008 0.37 755801 24 2701 744445 0.36 747146 25 2703 732306 0.37 735009 26 2594 722747 0.36 725341 27 2505 701554 0.36 704059 28 2529 690140 0.37 692669 29 2449 683848 0.36 686297 30 2462 665807 0.37 668269 31 2369 659411 0.36 661780 32 2355 648062 0.36 650417 33 2347 639266 0.37 641613 34 2192 628116 0.35 630308 35 2192 609778 0.36 611970 36 2037 601655 0.34 603692 37 2021 585370 0.34 587391 38 1997 580509 0.34 582506 39 2012 567731 0.35 569743 40 2012 562255 0.36 564267 41 1917 554922 0.34 556839 42 1881 551702 0.34 553583 43 1821 530928 0.34 532749 44 1735 524061 0.33 525796 45 1865 510387 0.36 512252 46 1751 498244 0.35 499995 47 1771 493291 0.36 495062 48 1668 483566 0.34 485234 49 1554 470600 0.33 472154 50 1628 473125 0.34 474753 51 1585 455335 0.35 456920 52 1542 452325 0.34 453867 53 1610 439322 0.37 440932 54 1530 432556 0.35 434086 55 1496 421572 0.35 423068 56 1508 416665 0.36 418173 57 1371 403433 0.34 404804 58 1336 399923 0.33 401259 59 1314 392569 0.33 393883 60 1396 388502 0.36 389898 61 1284 375463 0.34 376747 62 1300 375594 0.34 376894 63 1252 364646 0.34 365898 64 1223 359140 0.34 360363 65 1189 355750 0.33 356939 66 1219 346095 0.35 347314 67 1217 336127 0.36 337344 68 1203 335163 0.36 336366 69 1099 324863 0.34 325962 70 1152 319492 0.36 320644 71 1115 316174 0.35 317289 72 1080 306970 0.35 308050 73 1077 303087 0.35 304164 74 1036 297538 0.35 298574 75 1027 288326 0.35 289353 76 1044 284262 0.37 285306 77 999 277552 0.36 278551 78 919 273694 0.33 274613 79 937 266777 0.35 267714 80 944 263855 0.36 264799 81 860 256163 0.33 257023 82 847 252446 0.33 253293 83 863 248361 0.35 249224 84 860 243567 0.35 244427 85 837 239309 0.35 240146 86 828 236175 0.35 237003 87 795 228303 0.35 229098 88 820 225007 0.36 225827 89 775 220326 0.35 221101 90 720 216736 0.33 217456 91 721 212068 0.34 212789 92 697 209166 0.33 209863 93 650 204512 0.32 205162 94 705 202038 0.35 202743 95 691 196557 0.35 197248 96 686 193585 0.35 194271 97 661 188390 0.35 189051 98 686 185961 0.37 186647 99 622 180665 0.34 181287 100 662 178030 0.37 178692 101 644 174329 0.37 174973 102 605 171609 0.35 172214 103 621 168572 0.37 169193 104 585 166405 0.35 166990 105 567 161724 0.35 162291 106 527 159147 0.33 159674 107 521 155057 0.33 155578 108 548 152576 0.36 153124 109 538 149345 0.36 149883 110 536 147928 0.36 148464 111 538 143533 0.37 144071 112 542 141725 0.38 142267 113 526 137888 0.38 138414 114 483 135919 0.35 136402 115 474 132691 0.36 133165 116 483 131327 0.37 131810 117 489 128708 0.38 129197 118 445 125654 0.35 126099 119 495 122517 0.40 123012 120 441 120569 0.36 121010 121 448 116693 0.38 117141 122 492 116220 0.42 116712 123 443 112408 0.39 112851 124 436 111099 0.39 111535 125 434 108928 0.40 109362 126 369 107014 0.34 107383 127 421 103698 0.40 104119 128 441 101974 0.43 102415 129 425 100372 0.42 100797 130 400 97399 0.41 97799 131 405 95592 0.42 95997 132 398 93419 0.42 93817 133 341 91545 0.37 91886 134 309 89830 0.34 90139 135 308 84435 0.36 84743 136 145 72409 0.20 72554 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 21199 4074259 0.52 4095458 2 21078 4249737 0.49 4270815 3 19343 4209269 0.46 4228612 4 19967 4145940 0.48 4165907 5 18961 4060661 0.46 4079622 6 20292 3988694 0.51 4008986 7 18601 3905366 0.47 3923967 8 18727 3893473 0.48 3912200 9 16075 3807675 0.42 3823750 10 16553 3774467 0.44 3791020 11 15520 3704532 0.42 3720052 12 17130 3642546 0.47 3659676 13 15973 3589270 0.44 3605243 14 16437 3547040 0.46 3563477 15 14393 3480753 0.41 3495146 16 14443 3402564 0.42 3417007 17 13669 3386250 0.40 3399919 18 14658 3323126 0.44 3337784 19 14180 3283853 0.43 3298033 20 15171 3220316 0.47 3235487 21 13652 3151481 0.43 3165133 22 13492 3099795 0.43 3113287 23 11614 3050966 0.38 3062580 24 12500 3010578 0.41 3023078 25 11862 2955081 0.40 2966943 26 12944 2915684 0.44 2928628 27 12226 2884531 0.42 2896757 28 12429 2820466 0.44 2832895 29 10676 2775539 0.38 2786215 30 10847 2724234 0.40 2735081 31 10363 2668657 0.39 2679020 32 11198 2635586 0.42 2646784 33 10743 2578899 0.41 2589642 34 11309 2552421 0.44 2563730 35 9810 2509380 0.39 2519190 36 9895 2467512 0.40 2477407 37 9083 2411991 0.38 2421074 38 9666 2373465 0.41 2383131 39 9598 2326922 0.41 2336520 40 10059 2285307 0.44 2295366 41 9251 2253928 0.41 2263179 42 8934 2205976 0.40 2214910 43 8230 2170122 0.38 2178352 44 8262 2146688 0.38 2154950 45 8160 2110268 0.39 2118428 46 9209 2056814 0.45 2066023 47 8497 2019073 0.42 2027570 48 8380 1972576 0.42 1980956 49 7493 1947167 0.38 1954660 50 7514 1915789 0.39 1923303 51 7228 1888872 0.38 1896100 52 7743 1851023 0.42 1858766 53 7696 1826613 0.42 1834309 54 7846 1791275 0.44 1799121 55 6986 1750259 0.40 1757245 56 6689 1727521 0.39 1734210 57 6395 1698289 0.38 1704684 58 6959 1657294 0.42 1664253 59 6748 1635022 0.41 1641770 60 7188 1598362 0.45 1605550 61 6392 1562423 0.41 1568815 62 6150 1552331 0.39 1558481 63 5831 1516481 0.38 1522312 64 6117 1488014 0.41 1494131 65 5975 1466569 0.41 1472544 66 6299 1440116 0.44 1446415 67 6111 1411376 0.43 1417487 68 5817 1389378 0.42 1395195 69 5276 1357592 0.39 1362868 70 5297 1327460 0.40 1332757 71 5164 1312810 0.39 1317974 72 5458 1287230 0.42 1292688 73 5449 1264038 0.43 1269487 74 5444 1248799 0.43 1254243 75 4889 1217355 0.40 1222244 76 4763 1197648 0.40 1202411 77 4509 1169838 0.38 1174347 78 4787 1145037 0.42 1149824 79 4810 1129064 0.42 1133874 80 4717 1107528 0.42 1112245 81 4386 1082504 0.40 1086890 82 4295 1066700 0.40 1070995 83 4169 1044232 0.40 1048401 84 4181 1023800 0.41 1027981 85 4063 1005983 0.40 1010046 86 4074 990472 0.41 994546 87 4084 967066 0.42 971150 88 4008 945328 0.42 949336 89 3697 930335 0.40 934032 90 3570 911871 0.39 915441 91 3387 899579 0.38 902966 92 3557 883169 0.40 886726 93 3643 864012 0.42 867655 94 3591 845228 0.42 848819 95 3336 830504 0.40 833840 96 3193 814106 0.39 817299 97 3171 801954 0.39 805125 98 3246 788774 0.41 792020 99 3122 772423 0.40 775545 100 3319 761219 0.43 764538 101 3080 743822 0.41 746902 102 2839 727699 0.39 730538 103 2737 713495 0.38 716232 104 2844 700217 0.40 703061 105 2715 685522 0.39 688237 106 2856 675238 0.42 678094 107 2716 663683 0.41 666399 108 2548 649244 0.39 651792 109 2594 639962 0.40 642556 110 2492 626293 0.40 628785 111 2461 610541 0.40 613002 112 2412 600099 0.40 602511 113 2420 591450 0.41 593870 114 2449 578727 0.42 581176 115 2333 566155 0.41 568488 116 2230 558124 0.40 560354 117 2105 549959 0.38 552064 118 2301 537715 0.43 540016 119 2140 526261 0.40 528401 120 2102 514860 0.41 516962 121 2137 505287 0.42 507424 122 2066 495668 0.42 497734 123 1971 484306 0.41 486277 124 2052 476089 0.43 478141 125 1866 464033 0.40 465899 126 1985 456790 0.43 458775 127 1925 446094 0.43 448019 128 1844 440654 0.42 442498 129 1840 432358 0.42 434198 130 1798 420648 0.43 422446 131 1809 413213 0.44 415022 132 1734 402544 0.43 404278 133 1869 393197 0.47 395066 134 1710 385351 0.44 387061 135 1363 373422 0.36 374785 136 756 335806 0.22 336562