CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 196998 1430985 12.10 1627983 2 182127 1316352 12.15 1498479 3 180433 1335937 11.90 1516370 4 182883 1349820 11.93 1532703 5 186322 1351417 12.12 1537739 6 188052 1386067 11.95 1574119 7 190693 1387519 12.08 1578212 8 191754 1377441 12.22 1569195 9 191685 1377066 12.22 1568751 10 193416 1378628 12.30 1572044 11 194340 1374612 12.39 1568952 12 192852 1367427 12.36 1560279 13 192395 1361571 12.38 1553966 14 193950 1392055 12.23 1586005 15 195788 1410857 12.19 1606645 16 196946 1404902 12.29 1601848 17 194698 1413044 12.11 1607742 18 194919 1404270 12.19 1599189 19 196637 1402379 12.30 1599016 20 194463 1394507 12.24 1588970 21 194598 1385798 12.31 1580396 22 192975 1384930 12.23 1577905 23 193579 1390203 12.22 1583782 24 193146 1385355 12.24 1578501 25 193741 1405526 12.11 1599267 26 195326 1414542 12.13 1609868 27 193818 1411746 12.07 1605564 28 194211 1400930 12.18 1595141 29 193424 1399546 12.14 1592970 30 192620 1392191 12.15 1584811 31 192859 1382565 12.24 1575424 32 196304 1401642 12.28 1597946 33 194595 1394452 12.25 1589047 34 193147 1389069 12.21 1582216 35 192220 1399102 12.08 1591322 36 191300 1391144 12.09 1582444 37 191054 1399535 12.01 1590589 38 191425 1389614 12.11 1581039 39 194075 1400554 12.17 1594629 40 193239 1387989 12.22 1581228 41 194016 1406128 12.12 1600144 42 189666 1385813 12.04 1575479 43 193346 1392492 12.19 1585838 44 190959 1386720 12.10 1577679 45 187759 1385861 11.93 1573620 46 188117 1375493 12.03 1563610 47 188859 1391583 11.95 1580442 48 187971 1378936 12.00 1566907 49 190413 1381405 12.11 1571818 50 186094 1364700 12.00 1550794 51 188941 1370093 12.12 1559034 52 185612 1368082 11.95 1553694 53 183870 1365226 11.87 1549096 54 186091 1369845 11.96 1555936 55 183399 1365753 11.84 1549152 56 185043 1367840 11.92 1552883 57 185192 1367095 11.93 1552287 58 182268 1357709 11.84 1539977 59 183327 1349950 11.96 1533277 60 180886 1344981 11.85 1525867 61 182365 1353159 11.88 1535524 62 183282 1356887 11.90 1540169 63 182967 1358324 11.87 1541291 64 180947 1341050 11.89 1521997 65 180416 1347365 11.81 1527781 66 179171 1345666 11.75 1524837 67 177663 1333609 11.76 1511272 68 177760 1335423 11.75 1513183 69 178572 1333533 11.81 1512105 70 175497 1316283 11.76 1491780 71 176641 1322138 11.79 1498779 72 174596 1308802 11.77 1483398 73 176302 1309826 11.86 1486128 74 174807 1317202 11.72 1492009 75 171642 1309188 11.59 1480830 76 172297 1299611 11.71 1471908 77 170905 1301140 11.61 1472045 78 170402 1291674 11.65 1462076 79 170364 1291655 11.65 1462019 80 170188 1282307 11.72 1452495 81 169089 1276649 11.70 1445738 82 167297 1271287 11.63 1438584 83 166718 1267683 11.62 1434401 84 166287 1273287 11.55 1439574 85 166152 1269422 11.57 1435574 86 165134 1270058 11.51 1435192 87 164066 1263803 11.49 1427869 88 163889 1252624 11.57 1416513 89 162571 1248990 11.52 1411561 90 161229 1240500 11.50 1401729 91 161127 1245090 11.46 1406217 92 160387 1237933 11.47 1398320 93 160898 1230641 11.56 1391539 94 158219 1222636 11.46 1380855 95 157017 1225003 11.36 1382020 96 155544 1219593 11.31 1375137 97 156445 1210355 11.45 1366800 98 155431 1207488 11.40 1362919 99 153628 1199939 11.35 1353567 100 153251 1192421 11.39 1345672 101 152538 1190957 11.35 1343495 102 150247 1174439 11.34 1324686 103 148757 1165814 11.32 1314571 104 147956 1166706 11.25 1314662 105 147662 1161954 11.28 1309616 106 145923 1157756 11.19 1303679 107 146236 1153250 11.25 1299486 108 145402 1140742 11.31 1286144 109 144627 1140157 11.26 1284784 110 143261 1129298 11.26 1272559 111 142145 1126445 11.20 1268590 112 140274 1116133 11.16 1256407 113 139271 1106793 11.18 1246064 114 138542 1099007 11.19 1237549 115 137311 1092891 11.16 1230202 116 136573 1088421 11.15 1224994 117 135948 1082545 11.16 1218493 118 135186 1074006 11.18 1209192 119 134774 1072126 11.17 1206900 120 131524 1059679 11.04 1191203 121 130837 1051734 11.06 1182571 122 129040 1040368 11.03 1169408 123 130548 1038336 11.17 1168884 124 127859 1025842 11.08 1153701 125 126706 1021008 11.04 1147714 126 124820 1009957 11.00 1134777 127 124080 1006221 10.98 1130301 128 123257 1003841 10.94 1127098 129 121918 992000 10.94 1113918 130 120520 982505 10.93 1103025 131 120520 977400 10.98 1097920 132 119330 966508 10.99 1085838 133 117552 962611 10.88 1080163 134 115330 950842 10.82 1066172 135 104644 935155 10.06 1039799 136 50635 856981 5.58 907616 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 11051 2630190 0.42 2641241 2 9486 2222297 0.43 2231783 3 8556 2117558 0.40 2126114 4 8657 2130170 0.40 2138827 5 8603 2108512 0.41 2117115 6 8959 2071919 0.43 2080878 7 8418 2103204 0.40 2111622 8 9067 2147326 0.42 2156393 9 8637 2118593 0.41 2127230 10 8751 2161365 0.40 2170116 11 8671 2184686 0.40 2193357 12 8766 2171442 0.40 2180208 13 8452 2153116 0.39 2161568 14 8706 2160246 0.40 2168952 15 8502 2139759 0.40 2148261 16 8746 2172895 0.40 2181641 17 8616 2185172 0.39 2193788 18 8593 2164127 0.40 2172720 19 8394 2185601 0.38 2193995 20 8446 2166524 0.39 2174970 21 8472 2168096 0.39 2176568 22 8651 2181240 0.40 2189891 23 8476 2164116 0.39 2172592 24 8548 2169018 0.39 2177566 25 8606 2173591 0.39 2182197 26 8627 2186985 0.39 2195612 27 8489 2161759 0.39 2170248 28 8592 2161711 0.40 2170303 29 8339 2169430 0.38 2177769 30 8385 2149326 0.39 2157711 31 8593 2172202 0.39 2180795 32 8527 2170029 0.39 2178556 33 8690 2177474 0.40 2186164 34 8648 2172738 0.40 2181386 35 8522 2155327 0.39 2163849 36 8348 2167209 0.38 2175557 37 8360 2139946 0.39 2148306 38 8323 2164940 0.38 2173263 39 8352 2153560 0.39 2161912 40 8402 2164876 0.39 2173278 41 8388 2175471 0.38 2183859 42 8669 2178107 0.40 2186776 43 8330 2154149 0.39 2162479 44 8461 2155433 0.39 2163894 45 8377 2138528 0.39 2146905 46 8144 2131262 0.38 2139406 47 8478 2136955 0.40 2145433 48 8420 2149211 0.39 2157631 49 8545 2122630 0.40 2131175 50 8307 2155655 0.38 2163962 51 8343 2123954 0.39 2132297 52 8597 2135193 0.40 2143790 53 8270 2118560 0.39 2126830 54 8583 2118779 0.40 2127362 55 8252 2101892 0.39 2110144 56 8337 2115310 0.39 2123647 57 8250 2090399 0.39 2098649 58 8186 2103026 0.39 2111212 59 8346 2103936 0.40 2112282 60 8439 2117547 0.40 2125986 61 7999 2083049 0.38 2091048 62 8333 2109158 0.39 2117491 63 8380 2087312 0.40 2095692 64 8347 2090665 0.40 2099012 65 8335 2102270 0.39 2110605 66 8239 2086160 0.39 2094399 67 8203 2073329 0.39 2081532 68 8230 2087572 0.39 2095802 69 8130 2064969 0.39 2073099 70 8036 2069858 0.39 2077894 71 8161 2067224 0.39 2075385 72 8284 2052521 0.40 2060805 73 8049 2048190 0.39 2056239 74 8289 2039868 0.40 2048157 75 7984 2021911 0.39 2029895 76 7978 2026143 0.39 2034121 77 8150 2021075 0.40 2029225 78 7928 2015901 0.39 2023829 79 7871 2009479 0.39 2017350 80 8028 2010496 0.40 2018524 81 7924 1988786 0.40 1996710 82 7825 1987835 0.39 1995660 83 7792 1977891 0.39 1985683 84 8062 1978273 0.41 1986335 85 7694 1968911 0.39 1976605 86 7844 1979369 0.39 1987213 87 7603 1954855 0.39 1962458 88 7910 1957169 0.40 1965079 89 7839 1949488 0.40 1957327 90 7786 1943853 0.40 1951639 91 7825 1928194 0.40 1936019 92 7825 1926190 0.40 1934015 93 7630 1911546 0.40 1919176 94 7581 1913499 0.39 1921080 95 7604 1899025 0.40 1906629 96 7521 1894902 0.40 1902423 97 7570 1879161 0.40 1886731 98 7554 1887655 0.40 1895209 99 7682 1870046 0.41 1877728 100 7360 1862836 0.39 1870196 101 7483 1850033 0.40 1857516 102 7412 1843785 0.40 1851197 103 7529 1824580 0.41 1832109 104 7497 1828438 0.41 1835935 105 7261 1808652 0.40 1815913 106 7357 1804051 0.41 1811408 107 7359 1792459 0.41 1799818 108 7427 1786932 0.41 1794359 109 7458 1780605 0.42 1788063 110 7366 1777578 0.41 1784944 111 7339 1757982 0.42 1765321 112 7384 1746760 0.42 1754144 113 7161 1729710 0.41 1736871 114 7140 1725041 0.41 1732181 115 7021 1703138 0.41 1710159 116 7240 1705958 0.42 1713198 117 7149 1696585 0.42 1703734 118 7127 1686751 0.42 1693878 119 7029 1674733 0.42 1681762 120 7213 1666182 0.43 1673395 121 7189 1641595 0.44 1648784 122 7122 1637553 0.43 1644675 123 7184 1616786 0.44 1623970 124 7140 1616035 0.44 1623175 125 7053 1596614 0.44 1603667 126 7118 1583487 0.45 1590605 127 6951 1566123 0.44 1573074 128 6987 1562755 0.45 1569742 129 6991 1548136 0.45 1555127 130 7322 1541454 0.47 1548776 131 7470 1527953 0.49 1535423 132 7652 1516297 0.50 1523949 133 7514 1493175 0.50 1500689 134 6955 1485367 0.47 1492322 135 6040 1443261 0.42 1449301 136 2157 1311545 0.16 1313702 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 39122 8070306 0.48 8109428 2 41900 8559459 0.49 8601359 3 37303 8633738 0.43 8671041 4 41052 8607399 0.47 8648451 5 38306 8565871 0.45 8604177 6 42903 8532211 0.50 8575114 7 38556 8481489 0.45 8520045 8 40840 8567376 0.47 8608216 9 36620 8498151 0.43 8534771 10 39402 8554367 0.46 8593769 11 36539 8504123 0.43 8540662 12 40813 8478282 0.48 8519095 13 37961 8511185 0.44 8549146 14 40888 8534677 0.48 8575565 15 36589 8514074 0.43 8550663 16 38620 8467210 0.45 8505830 17 36999 8548799 0.43 8585798 18 40194 8553299 0.47 8593493 19 37575 8557055 0.44 8594630 20 40395 8516596 0.47 8556991 21 36743 8469654 0.43 8506397 22 39274 8441046 0.46 8480320 23 35891 8457369 0.42 8493260 24 38160 8478866 0.45 8517026 25 36416 8484965 0.43 8521381 26 39757 8514248 0.46 8554005 27 37476 8554283 0.44 8591759 28 39316 8510853 0.46 8550169 29 35789 8511946 0.42 8547735 30 38116 8480792 0.45 8518908 31 34825 8439792 0.41 8474617 32 38125 8477946 0.45 8516071 33 36364 8435582 0.43 8471946 34 39632 8485984 0.46 8525616 35 35395 8493676 0.41 8529071 36 37401 8493716 0.44 8531117 37 34749 8451363 0.41 8486112 38 37199 8476772 0.44 8513971 39 35531 8450289 0.42 8485820 40 38920 8442736 0.46 8481656 41 36111 8447173 0.43 8483284 42 37283 8404016 0.44 8441299 43 34357 8407284 0.41 8441641 44 36034 8444079 0.42 8480113 45 34987 8451147 0.41 8486134 46 38254 8410306 0.45 8448560 47 36051 8412766 0.43 8448817 48 37422 8360729 0.45 8398151 49 34674 8395462 0.41 8430136 50 35101 8396994 0.42 8432095 51 33554 8406776 0.40 8440330 52 37083 8381592 0.44 8418675 53 35925 8398268 0.43 8434193 54 37497 8381144 0.45 8418641 55 34559 8337687 0.41 8372246 56 34750 8374787 0.41 8409537 57 33723 8394450 0.40 8428173 58 35953 8334239 0.43 8370192 59 34695 8382846 0.41 8417541 60 36832 8343303 0.44 8380135 61 34237 8293364 0.41 8327601 62 35039 8335217 0.42 8370256 63 33189 8286260 0.40 8319449 64 34426 8275017 0.41 8309443 65 33494 8288701 0.40 8322195 66 35789 8292799 0.43 8328588 67 34143 8282534 0.41 8316677 68 34725 8300854 0.42 8335579 69 32538 8244539 0.39 8277077 70 34082 8217256 0.41 8251338 71 32796 8240386 0.40 8273182 72 34552 8190410 0.42 8224962 73 33408 8184713 0.41 8218121 74 34436 8186264 0.42 8220700 75 32437 8134295 0.40 8166732 76 33219 8145402 0.41 8178621 77 31967 8127901 0.39 8159868 78 33411 8087823 0.41 8121234 79 32426 8099366 0.40 8131792 80 33381 8071542 0.41 8104923 81 32148 8028216 0.40 8060364 82 33108 7995453 0.41 8028561 83 31346 7964162 0.39 7995508 84 32172 7924388 0.40 7956560 85 31150 7917728 0.39 7948878 86 32511 7923642 0.41 7956153 87 31605 7893769 0.40 7925374 88 32685 7861829 0.41 7894514 89 30984 7861237 0.39 7892221 90 32014 7827341 0.41 7859355 91 30354 7812655 0.39 7843009 92 31273 7779933 0.40 7811206 93 31302 7720963 0.40 7752265 94 31885 7678488 0.41 7710373 95 30299 7660456 0.39 7690755 96 30767 7629122 0.40 7659889 97 29551 7642673 0.39 7672224 98 30697 7634281 0.40 7664978 99 30223 7596898 0.40 7627121 100 31546 7571186 0.41 7602732 101 30271 7526393 0.40 7556664 102 30461 7466628 0.41 7497089 103 28610 7414167 0.38 7442777 104 28935 7373065 0.39 7402000 105 28717 7336597 0.39 7365314 106 30174 7322809 0.41 7352983 107 29302 7320854 0.40 7350156 108 29506 7275003 0.40 7304509 109 28653 7255930 0.39 7284583 110 28421 7210051 0.39 7238472 111 27910 7150964 0.39 7178874 112 29390 7104253 0.41 7133643 113 28558 7071728 0.40 7100286 114 29273 7023048 0.42 7052321 115 27826 6957458 0.40 6985284 116 27695 6947547 0.40 6975242 117 27457 6922527 0.40 6949984 118 27848 6883189 0.40 6911037 119 27692 6851805 0.40 6879497 120 27769 6783527 0.41 6811296 121 27843 6749899 0.41 6777742 122 27480 6692158 0.41 6719638 123 26688 6635911 0.40 6662599 124 27212 6584550 0.41 6611762 125 27061 6531889 0.41 6558950 126 27848 6484556 0.43 6512404 127 27069 6446523 0.42 6473592 128 27175 6429381 0.42 6456556 129 27155 6380480 0.42 6407635 130 27653 6319487 0.44 6347140 131 28041 6275044 0.44 6303085 132 29326 6201769 0.47 6231095 133 29646 6151636 0.48 6181282 134 29899 6102616 0.49 6132515 135 23118 6008341 0.38 6031459 136 11799 5636882 0.21 5648681 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 108509 868029 11.11 976538 2 98937 785040 11.19 883977 3 96594 787776 10.92 884370 4 95992 784648 10.90 880640 5 97996 780463 11.16 878459 6 97070 791888 10.92 888958 7 96974 783457 11.01 880431 8 96491 771020 11.12 867511 9 96024 762315 11.19 858339 10 95735 754574 11.26 850309 11 95198 743385 11.35 838583 12 93154 727189 11.36 820343 13 91663 718664 11.31 810327 14 91039 723000 11.18 814039 15 91280 727734 11.15 819014 16 89784 717112 11.13 806896 17 88534 714977 11.02 803511 18 87608 704853 11.06 792461 19 87495 693405 11.20 780900 20 85894 681881 11.19 767775 21 84815 670767 11.23 755582 22 83778 659532 11.27 743310 23 82384 654253 11.18 736637 24 80873 644249 11.15 725122 25 80142 646427 11.03 726569 26 79848 645280 11.01 725128 27 78726 636953 11.00 715679 28 77401 625338 11.01 702739 29 76110 616770 10.98 692880 30 75500 606844 11.06 682344 31 74646 595120 11.15 669766 32 75029 592992 11.23 668021 33 73300 583510 11.16 656810 34 71806 573766 11.12 645572 35 70791 572929 11.00 643720 36 69578 562949 11.00 632527 37 68757 560183 10.93 628940 38 68122 550063 11.02 618185 39 68163 548242 11.06 616405 40 66841 536297 11.08 603138 41 66183 535607 11.00 601790 42 64395 523048 10.96 587443 43 64445 517534 11.07 581979 44 63010 508683 11.02 571693 45 61446 503942 10.87 565388 46 59790 493529 10.81 553319 47 60074 493388 10.85 553462 48 59126 483343 10.90 542469 49 59113 479819 10.97 538932 50 57561 467461 10.96 525022 51 56966 464155 10.93 521121 52 55875 458625 10.86 514500 53 54646 452320 10.78 506966 54 54488 445622 10.90 500110 55 53170 438910 10.81 492080 56 53037 435117 10.86 488154 57 51936 429272 10.79 481208 58 50836 423527 10.72 474363 59 50626 415279 10.87 465905 60 49419 410289 10.75 459708 61 49204 405994 10.81 455198 62 48789 402030 10.82 450819 63 48387 397025 10.86 445412 64 47423 387608 10.90 435031 65 46209 384213 10.74 430422 66 45501 378923 10.72 424424 67 44412 371786 10.67 416198 68 44019 368403 10.67 412422 69 43483 363789 10.68 407272 70 42863 355978 10.75 398841 71 42385 354765 10.67 397150 72 41785 345823 10.78 387608 73 42115 342044 10.96 384159 74 40810 339818 10.72 380628 75 39425 332014 10.61 371439 76 39299 327705 10.71 367004 77 38444 323551 10.62 361995 78 37685 318414 10.58 356099 79 37298 316156 10.55 353454 80 37112 310211 10.69 347323 81 36133 304682 10.60 340815 82 36009 300247 10.71 336256 83 34855 295906 10.54 330761 84 34930 293996 10.62 328926 85 34649 289878 10.68 324527 86 33815 287029 10.54 320844 87 33428 283146 10.56 316574 88 32956 277743 10.61 310699 89 32240 273724 10.54 305964 90 31627 268520 10.54 300147 91 31437 267734 10.51 299171 92 30514 263535 10.38 294049 93 30387 259861 10.47 290248 94 29987 255334 10.51 285321 95 29162 253052 10.33 282214 96 28751 249009 10.35 277760 97 28788 243775 10.56 272563 98 28458 241126 10.56 269584 99 27309 237630 10.31 264939 100 27002 235414 10.29 262416 101 26819 232553 10.34 259372 102 26637 227874 10.47 254511 103 25948 222873 10.43 248821 104 25405 220806 10.32 246211 105 24994 218893 10.25 243887 106 24737 214476 10.34 239213 107 24305 212462 10.27 236767 108 23881 208485 10.28 232366 109 23891 207346 10.33 231237 110 23036 202763 10.20 225799 111 22529 199911 10.13 222440 112 22508 197276 10.24 219784 113 21970 194620 10.14 216590 114 21693 191634 10.17 213327 115 21558 188299 10.27 209857 116 20935 184828 10.17 205763 117 20891 183214 10.24 204105 118 20170 179827 10.09 199997 119 20199 177661 10.21 197860 120 19564 174076 10.10 193640 121 19487 171432 10.21 190919 122 19105 168751 10.17 187856 123 19055 167791 10.20 186846 124 18615 163730 10.21 182345 125 17991 161956 10.00 179947 126 17595 158603 9.99 176198 127 17481 157100 10.01 174581 128 17193 155052 9.98 172245 129 17068 152773 10.05 169841 130 16660 150215 9.98 166875 131 16397 147327 10.02 163724 132 15832 145030 9.84 160862 133 15672 143819 9.83 159491 134 14944 139091 9.70 154035 135 13532 136602 9.01 150134 136 6895 118983 5.48 125878 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 6769 1599380 0.42 1606149 2 5600 1331586 0.42 1337186 3 4961 1249983 0.40 1254944 4 5061 1241755 0.41 1246816 5 4910 1217075 0.40 1221985 6 4885 1181358 0.41 1186243 7 4773 1188834 0.40 1193607 8 4832 1198693 0.40 1203525 9 4691 1170899 0.40 1175590 10 4927 1185799 0.41 1190726 11 4631 1183585 0.39 1188216 12 4516 1167408 0.39 1171924 13 4466 1142370 0.39 1146836 14 4619 1131818 0.41 1136437 15 4308 1110563 0.39 1114871 16 4307 1111485 0.39 1115792 17 4180 1103921 0.38 1108101 18 4256 1084725 0.39 1088981 19 4169 1081888 0.38 1086057 20 4087 1064369 0.38 1068456 21 4004 1051081 0.38 1055085 22 4001 1046733 0.38 1050734 23 3785 1024687 0.37 1028472 24 3754 1014638 0.37 1018392 25 3708 1003266 0.37 1006974 26 3670 996104 0.37 999774 27 3743 974254 0.38 977997 28 3632 964306 0.38 967938 29 3468 957380 0.36 960848 30 3581 936867 0.38 940448 31 3498 937690 0.37 941188 32 3447 924640 0.37 928087 33 3478 913924 0.38 917402 34 3364 904664 0.37 908028 35 3398 884545 0.38 887943 36 3213 876848 0.37 880061 37 3179 856938 0.37 860117 38 3252 856503 0.38 859755 39 3087 840499 0.37 843586 40 3324 836446 0.40 839770 41 3069 833066 0.37 836135 42 2980 825220 0.36 828200 43 2942 804557 0.36 807499 44 3022 794001 0.38 797023 45 2906 779394 0.37 782300 46 2870 766420 0.37 769290 47 2762 758410 0.36 761172 48 2763 752166 0.37 754929 49 2675 737879 0.36 740554 50 2636 740189 0.35 742825 51 2709 720258 0.37 722967 52 2604 717918 0.36 720522 53 2562 701739 0.36 704301 54 2582 693793 0.37 696375 55 2515 680453 0.37 682968 56 2483 673029 0.37 675512 57 2478 658074 0.38 660552 58 2426 654595 0.37 657021 59 2477 645876 0.38 648353 60 2384 643314 0.37 645698 61 2457 627500 0.39 629957 62 2365 627662 0.38 630027 63 2297 614143 0.37 616440 64 2290 607155 0.38 609445 65 2191 601826 0.36 604017 66 2236 588356 0.38 590592 67 2180 579744 0.37 581924 68 2172 575234 0.38 577406 69 2112 564240 0.37 566352 70 2065 559967 0.37 562032 71 2075 554481 0.37 556556 72 2019 541651 0.37 543670 73 2063 536558 0.38 538621 74 1953 527828 0.37 529781 75 1819 516026 0.35 517845 76 1947 511646 0.38 513593 77 1816 503698 0.36 505514 78 1817 495326 0.37 497143 79 1825 489116 0.37 490941 80 1836 483320 0.38 485156 81 1798 474638 0.38 476436 82 1653 468987 0.35 470640 83 1715 463133 0.37 464848 84 1676 457146 0.37 458822 85 1640 451782 0.36 453422 86 1616 445919 0.36 447535 87 1596 435407 0.37 437003 88 1578 431707 0.36 433285 89 1644 424867 0.39 426511 90 1663 419074 0.40 420737 91 1563 412100 0.38 413663 92 1535 407782 0.38 409317 93 1533 401124 0.38 402657 94 1492 397831 0.37 399323 95 1473 391261 0.38 392734 96 1514 386523 0.39 388037 97 1447 377950 0.38 379397 98 1443 374527 0.38 375970 99 1364 368907 0.37 370271 100 1370 364796 0.37 366166 101 1391 358474 0.39 359865 102 1322 353616 0.37 354938 103 1341 347783 0.38 349124 104 1296 345444 0.37 346740 105 1288 337843 0.38 339131 106 1263 333607 0.38 334870 107 1205 329318 0.36 330523 108 1202 324668 0.37 325870 109 1257 319551 0.39 320808 110 1164 314888 0.37 316052 111 1178 309013 0.38 310191 112 1159 305126 0.38 306285 113 1110 300841 0.37 301951 114 1184 298536 0.40 299720 115 1110 291064 0.38 292174 116 1080 287835 0.37 288915 117 1185 283655 0.42 284840 118 1113 278621 0.40 279734 119 1049 274344 0.38 275393 120 1031 271069 0.38 272100 121 1023 265517 0.38 266540 122 970 262118 0.37 263088 123 1025 257254 0.40 258279 124 1001 255422 0.39 256423 125 1045 250900 0.41 251945 126 996 247389 0.40 248385 127 1028 241748 0.42 242776 128 983 240491 0.41 241474 129 922 235875 0.39 236797 130 963 231610 0.41 232573 131 984 227238 0.43 228222 132 987 224082 0.44 225069 133 866 219871 0.39 220737 134 812 216471 0.37 217283 135 676 206337 0.33 207013 136 339 178447 0.19 178786 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 22845 5070824 0.45 5093669 2 22238 5319632 0.42 5341870 3 21389 5313790 0.40 5335179 4 21883 5243091 0.42 5264974 5 21226 5160640 0.41 5181866 6 22118 5096711 0.43 5118829 7 20813 5014905 0.41 5035718 8 20706 5019463 0.41 5040169 9 19380 4939876 0.39 4959256 10 19961 4930969 0.40 4950930 11 18454 4866577 0.38 4885031 12 19447 4803330 0.40 4822777 13 18844 4766058 0.39 4784902 14 18809 4731645 0.40 4750454 15 17680 4663017 0.38 4680697 16 18154 4595454 0.39 4613608 17 17613 4589983 0.38 4607596 18 17779 4539847 0.39 4557626 19 17346 4498689 0.38 4516035 20 17668 4442658 0.40 4460326 21 16454 4377884 0.37 4394338 22 16933 4326368 0.39 4343301 23 15853 4276063 0.37 4291916 24 16158 4242784 0.38 4258942 25 15602 4195470 0.37 4211072 26 16026 4156736 0.38 4172762 27 15539 4125705 0.38 4141244 28 15934 4062035 0.39 4077969 29 14713 4020186 0.36 4034899 30 14947 3971573 0.37 3986520 31 14017 3915681 0.36 3929698 32 14876 3886604 0.38 3901480 33 14151 3827275 0.37 3841426 34 14817 3799147 0.39 3813964 35 13506 3754429 0.36 3767935 36 13916 3707720 0.37 3721636 37 13173 3643684 0.36 3656857 38 13679 3611093 0.38 3624772 39 13225 3561586 0.37 3574811 40 13756 3517010 0.39 3530766 41 13066 3483364 0.37 3496430 42 12719 3428227 0.37 3440946 43 12190 3396839 0.36 3409029 44 12199 3369018 0.36 3381217 45 12012 3329868 0.36 3341880 46 12638 3273426 0.38 3286064 47 11923 3230864 0.37 3242787 48 12057 3170902 0.38 3182959 49 11532 3144826 0.37 3156358 50 11548 3111204 0.37 3122752 51 11170 3087146 0.36 3098316 52 11526 3040795 0.38 3052321 53 11311 3012026 0.37 3023337 54 11405 2968734 0.38 2980139 55 10634 2921577 0.36 2932211 56 10452 2890892 0.36 2901344 57 10243 2858180 0.36 2868423 58 10552 2807993 0.37 2818545 59 10332 2786146 0.37 2796478 60 10353 2742655 0.38 2753008 61 9817 2698222 0.36 2708039 62 9896 2685385 0.37 2695281 63 9459 2642333 0.36 2651792 64 9481 2606479 0.36 2615960 65 9425 2576958 0.36 2586383 66 9651 2544186 0.38 2553837 67 9131 2509450 0.36 2518581 68 9095 2482058 0.37 2491153 69 8610 2436686 0.35 2445296 70 8778 2402650 0.36 2411428 71 8563 2384835 0.36 2393398 72 8818 2346750 0.37 2355568 73 8510 2319186 0.37 2327696 74 8398 2298783 0.36 2307181 75 8213 2254635 0.36 2262848 76 8026 2229792 0.36 2237818 77 7709 2194531 0.35 2202240 78 7862 2157718 0.36 2165580 79 7642 2137373 0.36 2145015 80 7758 2109985 0.37 2117743 81 7465 2076016 0.36 2083481 82 7499 2047975 0.36 2055474 83 7286 2016358 0.36 2023644 84 7328 1988551 0.37 1995879 85 6918 1965741 0.35 1972659 86 7233 1946570 0.37 1953803 87 6891 1914057 0.36 1920948 88 7015 1883183 0.37 1890198 89 6955 1862847 0.37 1869802 90 6807 1831863 0.37 1838670 91 6508 1814345 0.36 1820853 92 6426 1788243 0.36 1794669 93 6571 1762299 0.37 1768870 94 6348 1736579 0.36 1742927 95 6184 1714778 0.36 1720962 96 6132 1687340 0.36 1693472 97 5934 1668652 0.35 1674586 98 6103 1649034 0.37 1655137 99 5906 1624708 0.36 1630614 100 5906 1602781 0.37 1608687 101 5772 1577183 0.36 1582955 102 5681 1552743 0.36 1558424 103 5530 1530385 0.36 1535915 104 5392 1508480 0.36 1513872 105 5404 1486393 0.36 1491797 106 5480 1468415 0.37 1473895 107 5310 1448959 0.37 1454269 108 5159 1426139 0.36 1431298 109 5036 1411316 0.36 1416352 110 5046 1388308 0.36 1393354 111 4781 1364877 0.35 1369658 112 4955 1344814 0.37 1349769 113 4899 1330809 0.37 1335708 114 4815 1308912 0.37 1313727 115 4681 1287930 0.36 1292611 116 4714 1273742 0.37 1278456 117 4717 1254797 0.37 1259514 118 4575 1237436 0.37 1242011 119 4464 1218563 0.36 1223027 120 4578 1198805 0.38 1203383 121 4519 1181934 0.38 1186453 122 4400 1162849 0.38 1167249 123 4454 1143432 0.39 1147886 124 4317 1128698 0.38 1133015 125 4254 1110074 0.38 1114328 126 4130 1095842 0.38 1099972 127 4189 1077470 0.39 1081659 128 4080 1066583 0.38 1070663 129 4060 1049484 0.39 1053544 130 3952 1026535 0.38 1030487 131 4103 1013650 0.40 1017753 132 4085 991789 0.41 995874 133 3925 976038 0.40 979963 134 3893 959923 0.40 963816 135 3140 938406 0.33 941546 136 1764 845358 0.21 847122