CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 368609 2235625 14.15 2604234 2 348107 2070865 14.39 2418972 3 347171 2102829 14.17 2450000 4 351616 2122440 14.21 2474056 5 356306 2113153 14.43 2469459 6 357858 2174678 14.13 2532536 7 365865 2178595 14.38 2544460 8 365682 2163124 14.46 2528806 9 366238 2166280 14.46 2532518 10 368195 2166962 14.52 2535157 11 371785 2172009 14.62 2543794 12 368145 2153230 14.60 2521375 13 367801 2140101 14.67 2507902 14 372463 2183457 14.57 2555920 15 376438 2210899 14.55 2587337 16 376133 2198165 14.61 2574298 17 374655 2215239 14.47 2589894 18 370389 2201968 14.40 2572357 19 374424 2194618 14.57 2569042 20 372487 2191098 14.53 2563585 21 373214 2181522 14.61 2554736 22 371105 2179811 14.55 2550916 23 372080 2194264 14.50 2566344 24 371793 2175815 14.59 2547608 25 370312 2211987 14.34 2582299 26 370903 2222184 14.30 2593087 27 373493 2209172 14.46 2582665 28 368576 2200377 14.35 2568953 29 370385 2194557 14.44 2564942 30 368533 2184533 14.43 2553066 31 366276 2173202 14.42 2539478 32 375362 2205613 14.54 2580975 33 370684 2201844 14.41 2572528 34 367527 2192246 14.36 2559773 35 368815 2203012 14.34 2571827 36 364831 2186951 14.30 2551782 37 364414 2191277 14.26 2555691 38 361968 2185127 14.21 2547095 39 368522 2198051 14.36 2566573 40 367877 2185241 14.41 2553118 41 370438 2207068 14.37 2577506 42 362657 2183632 14.24 2546289 43 368736 2192887 14.39 2561623 44 363205 2179900 14.28 2543105 45 361254 2182767 14.20 2544021 46 357436 2161399 14.19 2518835 47 357607 2182473 14.08 2540080 48 358425 2161422 14.22 2519847 49 361950 2165575 14.32 2527525 50 355284 2139272 14.24 2494556 51 357451 2150454 14.25 2507905 52 350827 2147668 14.04 2498495 53 350693 2146356 14.04 2497049 54 352429 2149819 14.08 2502248 55 348160 2141938 13.98 2490098 56 353398 2146269 14.14 2499667 57 350744 2144318 14.06 2495062 58 348324 2121964 14.10 2470288 59 346225 2108922 14.10 2455147 60 342577 2105551 13.99 2448128 61 347016 2116755 14.08 2463771 62 346964 2129219 14.01 2476183 63 347636 2124524 14.06 2472160 64 343620 2096588 14.08 2440208 65 342204 2105126 13.98 2447330 66 343370 2098009 14.06 2441379 67 338828 2080739 14.00 2419567 68 336116 2080248 13.91 2416364 69 338595 2074017 14.03 2412612 70 333471 2047939 14.00 2381410 71 336032 2052005 14.07 2388037 72 327450 2029617 13.89 2357067 73 332953 2032457 14.08 2365410 74 328204 2041898 13.85 2370102 75 325080 2029197 13.81 2354277 76 322988 2015565 13.81 2338553 77 320274 2013125 13.73 2333399 78 319141 1996717 13.78 2315858 79 320019 1989760 13.85 2309779 80 317154 1979861 13.81 2297015 81 313027 1966298 13.73 2279325 82 311263 1953806 13.74 2265069 83 308442 1951169 13.65 2259611 84 307229 1955121 13.58 2262350 85 307845 1946366 13.66 2254211 86 304846 1942930 13.56 2247776 87 303662 1930993 13.59 2234655 88 302969 1916851 13.65 2219820 89 298123 1907200 13.52 2205323 90 296903 1888975 13.58 2185878 91 295317 1890763 13.51 2186080 92 292436 1873771 13.50 2166207 93 292213 1862565 13.56 2154778 94 287577 1843254 13.50 2130831 95 287391 1844057 13.48 2131448 96 283883 1833954 13.40 2117837 97 282578 1817286 13.46 2099864 98 279504 1814348 13.35 2093852 99 277508 1794450 13.39 2071958 100 275393 1781151 13.39 2056544 101 276180 1780775 13.43 2056955 102 268445 1746351 13.32 2014796 103 264510 1730408 13.26 1994918 104 264838 1728402 13.29 1993240 105 263054 1720389 13.26 1983443 106 260203 1704505 13.24 1964708 107 257271 1695531 13.17 1952802 108 253190 1676205 13.12 1929395 109 254323 1671948 13.20 1926271 110 251103 1646070 13.24 1897173 111 247771 1639906 13.13 1887677 112 246040 1619923 13.19 1865963 113 242204 1605923 13.11 1848127 114 239565 1586957 13.12 1826522 115 236269 1578646 13.02 1814915 116 234232 1566246 13.01 1800478 117 233182 1553304 13.05 1786486 118 230754 1537068 13.05 1767822 119 230301 1527748 13.10 1758049 120 225725 1503807 13.05 1729532 121 224206 1491434 13.07 1715640 122 220972 1472774 13.05 1693746 123 218144 1459508 13.00 1677652 124 215596 1443734 12.99 1659330 125 211529 1430536 12.88 1642065 126 207077 1412761 12.78 1619838 127 205321 1399409 12.79 1604730 128 204277 1393821 12.78 1598098 129 202299 1375511 12.82 1577810 130 198738 1356391 12.78 1555129 131 197704 1344567 12.82 1542271 132 194784 1326600 12.80 1521384 133 191946 1316887 12.72 1508833 134 188332 1297470 12.68 1485802 135 167382 1275400 11.60 1442782 136 79698 1203611 6.21 1283309 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 17514 4172669 0.42 4190183 2 15059 3542488 0.42 3557547 3 13355 3386002 0.39 3399357 4 13553 3412476 0.40 3426029 5 13075 3379006 0.39 3392081 6 13757 3321843 0.41 3335600 7 13129 3366064 0.39 3379193 8 14251 3441448 0.41 3455699 9 13455 3384077 0.40 3397532 10 13641 3456470 0.39 3470111 11 13716 3494719 0.39 3508435 12 13213 3483892 0.38 3497105 13 13011 3448665 0.38 3461676 14 13232 3458303 0.38 3471535 15 13220 3423840 0.38 3437060 16 13322 3470853 0.38 3484175 17 13169 3491247 0.38 3504416 18 13127 3455144 0.38 3468271 19 13186 3504909 0.37 3518095 20 13285 3469709 0.38 3482994 21 13293 3467086 0.38 3480379 22 13093 3484228 0.37 3497321 23 13081 3460503 0.38 3473584 24 13223 3477738 0.38 3490961 25 13076 3476232 0.37 3489308 26 13241 3507345 0.38 3520586 27 13314 3464974 0.38 3478288 28 13197 3459735 0.38 3472932 29 13086 3475558 0.38 3488644 30 13255 3432588 0.38 3445843 31 13169 3473511 0.38 3486680 32 13330 3469625 0.38 3482955 33 13303 3482735 0.38 3496038 34 13144 3478800 0.38 3491944 35 12998 3455068 0.37 3468066 36 13141 3465370 0.38 3478511 37 12927 3414588 0.38 3427515 38 13071 3460507 0.38 3473578 39 13140 3441946 0.38 3455086 40 13138 3460382 0.38 3473520 41 13176 3479494 0.38 3492670 42 13474 3487611 0.38 3501085 43 12961 3437985 0.38 3450946 44 13062 3452319 0.38 3465381 45 13059 3417931 0.38 3430990 46 12991 3408005 0.38 3420996 47 13076 3419123 0.38 3432199 48 13017 3426790 0.38 3439807 49 12692 3387590 0.37 3400282 50 12956 3444531 0.37 3457487 51 12662 3384299 0.37 3396961 52 13417 3411545 0.39 3424962 53 12899 3375350 0.38 3388249 54 13087 3381090 0.39 3394177 55 12702 3345715 0.38 3358417 56 12755 3376924 0.38 3389679 57 12596 3334548 0.38 3347144 58 12613 3345297 0.38 3357910 59 12992 3352462 0.39 3365454 60 13076 3368620 0.39 3381696 61 12733 3312689 0.38 3325422 62 12892 3353740 0.38 3366632 63 12714 3312041 0.38 3324755 64 12589 3320538 0.38 3333127 65 12913 3332734 0.39 3345647 66 13034 3309382 0.39 3322416 67 12931 3285701 0.39 3298632 68 12868 3321224 0.39 3334092 69 12775 3267192 0.39 3279967 70 12528 3273853 0.38 3286381 71 12558 3261407 0.38 3273965 72 12465 3235688 0.38 3248153 73 12421 3224495 0.38 3236916 74 12437 3216360 0.39 3228797 75 12562 3186529 0.39 3199091 76 12388 3185874 0.39 3198262 77 12286 3178049 0.39 3190335 78 12299 3170577 0.39 3182876 79 12122 3146581 0.38 3158703 80 12482 3152200 0.39 3164682 81 12163 3106286 0.39 3118449 82 12073 3112072 0.39 3124145 83 11925 3090490 0.38 3102415 84 11800 3079810 0.38 3091610 85 11918 3066300 0.39 3078218 86 12046 3080073 0.39 3092119 87 11906 3035434 0.39 3047340 88 11943 3032109 0.39 3044052 89 11828 3030131 0.39 3041959 90 11833 3005562 0.39 3017395 91 11774 2977828 0.39 2989602 92 11697 2966567 0.39 2978264 93 11612 2937168 0.39 2948780 94 11509 2936296 0.39 2947805 95 11523 2909087 0.39 2920610 96 11676 2893941 0.40 2905617 97 11235 2874747 0.39 2885982 98 11483 2882530 0.40 2894013 99 11361 2850748 0.40 2862109 100 11266 2827436 0.40 2838702 101 10962 2809198 0.39 2820160 102 11017 2785835 0.39 2796852 103 11250 2758619 0.41 2769869 104 10982 2754345 0.40 2765327 105 10837 2718937 0.40 2729774 106 10843 2709232 0.40 2720075 107 10831 2690174 0.40 2701005 108 10687 2670669 0.40 2681356 109 10880 2653537 0.41 2664417 110 10860 2652647 0.41 2663507 111 10706 2605697 0.41 2616403 112 10728 2591694 0.41 2602422 113 10328 2549440 0.40 2559768 114 10445 2534674 0.41 2545119 115 10101 2500494 0.40 2510595 116 10269 2496191 0.41 2506460 117 10270 2476918 0.41 2487188 118 10301 2455919 0.42 2466220 119 10009 2435207 0.41 2445216 120 10228 2412790 0.42 2423018 121 10093 2373147 0.42 2383240 122 10045 2369595 0.42 2379640 123 9961 2322025 0.43 2331986 124 9894 2309273 0.43 2319167 125 9767 2281854 0.43 2291621 126 9760 2258874 0.43 2268634 127 9857 2224326 0.44 2234183 128 9926 2212130 0.45 2222056 129 9972 2181045 0.46 2191017 130 10317 2161941 0.47 2172258 131 10679 2149966 0.49 2160645 132 10666 2120669 0.50 2131335 133 10782 2084679 0.51 2095461 134 10019 2070925 0.48 2080944 135 8403 2018210 0.41 2026613 136 2936 1875678 0.16 1878614 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 62590 12306922 0.51 12369512 2 64945 13086304 0.49 13151249 3 58647 13173405 0.44 13232052 4 63897 13143965 0.48 13207862 5 59521 13089214 0.45 13148735 6 67957 13046819 0.52 13114776 7 62607 12960399 0.48 13023006 8 64781 13098616 0.49 13163397 9 56904 12986954 0.44 13043858 10 62258 13028297 0.48 13090555 11 57315 12958445 0.44 13015760 12 64606 12916086 0.50 12980692 13 61083 12971414 0.47 13032497 14 65489 13014494 0.50 13079983 15 58580 12981426 0.45 13040006 16 60952 12914508 0.47 12975460 17 56646 13043939 0.43 13100585 18 62503 13034120 0.48 13096623 19 61196 13052223 0.47 13113419 20 64703 12985579 0.50 13050282 21 59415 12887015 0.46 12946430 22 62128 12840615 0.48 12902743 23 54931 12886223 0.42 12941154 24 59684 12908962 0.46 12968646 25 57436 12920908 0.44 12978344 26 63479 12982162 0.49 13045641 27 60120 13051322 0.46 13111442 28 62331 12964873 0.48 13027204 29 55724 12969885 0.43 13025609 30 58701 12911402 0.45 12970103 31 55358 12848626 0.43 12903984 32 60139 12897758 0.46 12957897 33 58661 12820434 0.46 12879095 34 62493 12909360 0.48 12971853 35 55906 12921285 0.43 12977191 36 57966 12933171 0.45 12991137 37 54537 12857891 0.42 12912428 38 57816 12906991 0.45 12964807 39 56851 12869182 0.44 12926033 40 61180 12844852 0.47 12906032 41 57134 12842165 0.44 12899299 42 57747 12773576 0.45 12831323 43 54350 12764672 0.42 12819022 44 54919 12829821 0.43 12884740 45 54439 12846233 0.42 12900672 46 59913 12787568 0.47 12847481 47 56500 12785514 0.44 12842014 48 58139 12698000 0.46 12756139 49 54811 12757045 0.43 12811856 50 53766 12759349 0.42 12813115 51 51604 12770423 0.40 12822027 52 57543 12714063 0.45 12771606 53 56233 12722056 0.44 12778289 54 58813 12711938 0.46 12770751 55 54356 12644662 0.43 12699018 56 52960 12711413 0.41 12764373 57 52070 12738310 0.41 12790380 58 55420 12631824 0.44 12687244 59 53712 12715393 0.42 12769105 60 56994 12631257 0.45 12688251 61 54584 12559394 0.43 12613978 62 52621 12619585 0.42 12672206 63 51825 12520133 0.41 12571958 64 52245 12502519 0.42 12554764 65 51680 12529704 0.41 12581384 66 54985 12511963 0.44 12566948 67 53466 12511295 0.43 12564761 68 52300 12527036 0.42 12579336 69 50585 12443233 0.40 12493818 70 51192 12371230 0.41 12422422 71 49888 12411846 0.40 12461734 72 51712 12322630 0.42 12374342 73 51861 12300484 0.42 12352345 74 52887 12300347 0.43 12353234 75 49651 12200608 0.41 12250259 76 49517 12218189 0.40 12267706 77 47267 12186880 0.39 12234147 78 50059 12104829 0.41 12154888 79 50087 12112756 0.41 12162843 80 50457 12060944 0.42 12111401 81 49142 11974714 0.41 12023856 82 49085 11912926 0.41 11962011 83 46475 11856333 0.39 11902808 84 46895 11779948 0.40 11826843 85 47295 11738284 0.40 11785579 86 48215 11748865 0.41 11797080 87 48353 11687174 0.41 11735527 88 48284 11629227 0.41 11677511 89 45709 11608662 0.39 11654371 90 46100 11532035 0.40 11578135 91 45486 11508191 0.39 11553677 92 45503 11435467 0.40 11480970 93 46985 11327157 0.41 11374142 94 47260 11246578 0.42 11293838 95 44663 11190105 0.40 11234768 96 44359 11138205 0.40 11182564 97 42628 11141801 0.38 11184429 98 43413 11115229 0.39 11158642 99 44409 11046836 0.40 11091245 100 45409 10981445 0.41 11026854 101 43989 10892520 0.40 10936509 102 43062 10780966 0.40 10824028 103 41827 10675637 0.39 10717464 104 40963 10595262 0.39 10636225 105 41314 10523090 0.39 10564404 106 42390 10501202 0.40 10543592 107 41993 10465112 0.40 10507105 108 42013 10377387 0.40 10419400 109 40487 10340453 0.39 10380940 110 39319 10246684 0.38 10286003 111 39666 10140098 0.39 10179764 112 40204 10038753 0.40 10078957 113 40069 9961578 0.40 10001647 114 40461 9863313 0.41 9903774 115 39578 9745876 0.40 9785454 116 38184 9734687 0.39 9772871 117 37410 9664951 0.39 9702361 118 38260 9597846 0.40 9636106 119 38545 9526072 0.40 9564617 120 39144 9403217 0.41 9442361 121 38029 9331612 0.41 9369641 122 36766 9239190 0.40 9275956 123 35559 9110783 0.39 9146342 124 37344 9020892 0.41 9058236 125 36277 8912040 0.41 8948317 126 37173 8833977 0.42 8871150 127 36816 8755852 0.42 8792668 128 36220 8711769 0.41 8747989 129 36494 8628471 0.42 8664965 130 37062 8523805 0.43 8560867 131 37082 8442350 0.44 8479432 132 39659 8318318 0.47 8357977 133 40894 8218025 0.50 8258919 134 40301 8137975 0.49 8178276 135 30489 8009103 0.38 8039592 136 15161 7629904 0.20 7645065 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 161445 1112912 12.67 1274357 2 149126 1008015 12.89 1157141 3 145639 1007347 12.63 1152986 4 146070 996337 12.79 1142407 5 145695 987058 12.86 1132753 6 143832 999113 12.58 1142945 7 143983 987343 12.73 1131326 8 142679 965912 12.87 1108591 9 141311 954089 12.90 1095400 10 139851 942826 12.92 1082677 11 137986 925842 12.97 1063828 12 135147 906692 12.97 1041839 13 132962 888283 13.02 1021245 14 131720 890657 12.88 1022377 15 131459 893038 12.83 1024497 16 129416 872713 12.91 1002129 17 127939 867483 12.85 995422 18 124120 851487 12.72 975607 19 123749 838005 12.87 961754 20 120383 822708 12.76 943091 21 118971 806718 12.85 925689 22 116754 793012 12.83 909766 23 114433 783347 12.75 897780 24 113199 767212 12.86 880411 25 111203 765967 12.68 877170 26 109585 761462 12.58 871047 27 109524 745754 12.81 855278 28 106041 735766 12.60 841807 29 104137 719849 12.64 823986 30 102771 707890 12.68 810661 31 100367 691893 12.67 792260 32 101293 690207 12.80 791500 33 98604 676371 12.72 774975 34 96540 662861 12.71 759401 35 94839 658316 12.59 753155 36 92084 643665 12.52 735749 37 90994 638130 12.48 729124 38 89737 627166 12.52 716903 39 89442 622418 12.56 711860 40 87887 608890 12.61 696777 41 87854 605117 12.68 692971 42 83849 588049 12.48 671898 43 84442 581928 12.67 666370 44 82108 568697 12.62 650805 45 80555 561629 12.54 642184 46 78059 548412 12.46 626471 47 76716 546740 12.30 623456 48 75803 531456 12.48 607259 49 76049 528115 12.59 604164 50 72557 512911 12.39 585468 51 72275 508445 12.45 580720 52 69810 499909 12.25 569719 53 68663 490703 12.28 559366 54 67989 483982 12.32 551971 55 66459 473785 12.30 540244 56 66008 468761 12.34 534769 57 64813 463218 12.27 528031 58 63108 451938 12.25 515046 59 61912 443508 12.25 505420 60 61020 435336 12.29 496356 61 60722 431784 12.33 492506 62 60206 429135 12.30 489341 63 59823 422786 12.40 482609 64 57504 407900 12.36 465404 65 56461 404036 12.26 460497 66 56089 397485 12.37 453574 67 54295 388753 12.25 443048 68 53116 382902 12.18 436018 69 52788 378832 12.23 431620 70 51252 369698 12.18 420950 71 51828 366219 12.40 418047 72 49486 356914 12.18 406400 73 49447 353308 12.28 402755 74 48581 349606 12.20 398187 75 46994 341236 12.10 388230 76 45875 334553 12.06 380428 77 45286 327927 12.13 373213 78 44742 323325 12.16 368067 79 43935 318553 12.12 362488 80 42973 313780 12.05 356753 81 41708 306165 11.99 347873 82 40939 299617 12.02 340556 83 40397 296054 12.01 336451 84 39747 292525 11.96 332272 85 39286 288083 12.00 327369 86 38553 284580 11.93 323133 87 38128 278518 12.04 316646 88 37072 273284 11.94 310356 89 36167 268842 11.86 305009 90 35746 262976 11.97 298722 91 35675 262802 11.95 298477 92 34590 256584 11.88 291174 93 34273 253377 11.91 287650 94 32962 248102 11.73 281064 95 33410 244716 12.01 278126 96 32291 240364 11.84 272655 97 31491 234609 11.83 266100 98 30669 233110 11.63 263779 99 30203 227315 11.73 257518 100 29755 223549 11.75 253304 101 29615 222649 11.74 252264 102 28555 216564 11.65 245119 103 27798 211536 11.61 239334 104 27858 209294 11.75 237152 105 27281 205796 11.70 233077 106 26676 202801 11.62 229477 107 26088 198901 11.60 224989 108 25666 195030 11.63 220696 109 25350 193222 11.60 218572 110 24620 187701 11.60 212321 111 24059 185986 11.45 210045 112 23840 182521 11.55 206361 113 23257 179717 11.46 202974 114 22588 175136 11.42 197724 115 22594 172487 11.58 195081 116 21871 170301 11.38 192172 117 21668 166987 11.49 188655 118 21201 164437 11.42 185638 119 20953 162072 11.45 183025 120 20269 157848 11.38 178117 121 20114 154845 11.50 174959 122 19559 152032 11.40 171591 123 19072 150373 11.26 169445 124 18631 147239 11.23 165870 125 18401 144925 11.27 163326 126 17876 142521 11.14 160397 127 17690 139139 11.28 156829 128 17298 137255 11.19 154553 129 17099 135045 11.24 152144 130 16202 132957 10.86 149159 131 16329 129676 11.18 146005 132 15822 127122 11.07 142944 133 15456 124847 11.02 140303 134 14693 122420 10.72 137113 135 13211 118493 10.03 131704 136 6672 104189 6.02 110861 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 8984 2075435 0.43 2084419 2 7273 1723607 0.42 1730880 3 6249 1616642 0.39 1622891 4 6275 1596437 0.39 1602712 5 5989 1560748 0.38 1566737 6 6152 1509497 0.41 1515649 7 5656 1515533 0.37 1521189 8 5990 1523912 0.39 1529902 9 5912 1482423 0.40 1488335 10 5918 1494915 0.39 1500833 11 5737 1490118 0.38 1495855 12 5443 1464936 0.37 1470379 13 5104 1428324 0.36 1433428 14 5442 1404660 0.39 1410102 15 5202 1371289 0.38 1376491 16 5214 1368049 0.38 1373263 17 4947 1357236 0.36 1362183 18 4866 1328050 0.37 1332916 19 4759 1322246 0.36 1327005 20 4829 1294465 0.37 1299294 21 4592 1274294 0.36 1278886 22 4661 1264398 0.37 1269059 23 4461 1234618 0.36 1239079 24 4520 1223891 0.37 1228411 25 4351 1202729 0.36 1207080 26 4394 1189181 0.37 1193575 27 4207 1159321 0.36 1163528 28 4127 1140549 0.36 1144676 29 4033 1133020 0.35 1137053 30 3976 1103701 0.36 1107677 31 4004 1100267 0.36 1104271 32 3880 1081662 0.36 1085542 33 3793 1066525 0.35 1070318 34 3711 1052457 0.35 1056168 35 3605 1024853 0.35 1028458 36 3528 1013198 0.35 1016726 37 3474 983377 0.35 986851 38 3526 980144 0.36 983670 39 3365 963296 0.35 966661 40 3425 954117 0.36 957542 41 3407 944465 0.36 947872 42 3451 937969 0.37 941420 43 3140 907552 0.34 910692 44 3168 897304 0.35 900472 45 3174 875134 0.36 878308 46 2915 855922 0.34 858837 47 2967 845339 0.35 848306 48 2982 833889 0.36 836871 49 2857 815887 0.35 818744 50 2850 819636 0.35 822486 51 2817 792954 0.35 795771 52 2813 787879 0.36 790692 53 2698 767452 0.35 770150 54 2765 758953 0.36 761718 55 2616 737358 0.35 739974 56 2512 730093 0.34 732605 57 2484 709323 0.35 711807 58 2459 702697 0.35 705156 59 2449 694434 0.35 696883 60 2528 689675 0.37 692203 61 2324 667406 0.35 669730 62 2414 667982 0.36 670396 63 2225 652291 0.34 654516 64 2117 643358 0.33 645475 65 2155 634171 0.34 636326 66 2189 620488 0.35 622677 67 2104 606887 0.35 608991 68 2131 604220 0.35 606351 69 2096 587294 0.36 589390 70 2093 582096 0.36 584189 71 1945 575698 0.34 577643 72 1975 560384 0.35 562359 73 1932 551540 0.35 553472 74 1858 543309 0.34 545167 75 1934 528682 0.36 530616 76 1787 522665 0.34 524452 77 1805 510812 0.35 512617 78 1826 504798 0.36 506624 79 1670 495763 0.34 497433 80 1678 489378 0.34 491056 81 1626 478226 0.34 479852 82 1619 472267 0.34 473886 83 1606 463741 0.35 465347 84 1698 456205 0.37 457903 85 1530 448226 0.34 449756 86 1498 445258 0.34 446756 87 1485 431318 0.34 432803 88 1500 423595 0.35 425095 89 1468 418711 0.35 420179 90 1439 411410 0.35 412849 91 1455 403575 0.36 405030 92 1456 397813 0.36 399269 93 1359 390700 0.35 392059 94 1346 387180 0.35 388526 95 1315 380489 0.34 381804 96 1346 372823 0.36 374169 97 1312 364043 0.36 365355 98 1238 360327 0.34 361565 99 1265 353170 0.36 354435 100 1172 347733 0.34 348905 101 1255 342244 0.37 343499 102 1193 336867 0.35 338060 103 1142 329877 0.34 331019 104 1203 326771 0.37 327974 105 1155 319933 0.36 321088 106 1081 313251 0.34 314332 107 1121 307980 0.36 309101 108 1074 303461 0.35 304535 109 1077 298907 0.36 299984 110 1075 293974 0.36 295049 111 996 286255 0.35 287251 112 1026 282570 0.36 283596 113 1002 277644 0.36 278646 114 1027 274240 0.37 275267 115 978 267444 0.36 268422 116 937 263687 0.35 264624 117 933 259258 0.36 260191 118 879 255106 0.34 255985 119 873 250401 0.35 251274 120 957 244348 0.39 245305 121 873 239000 0.36 239873 122 868 237418 0.36 238286 123 883 231505 0.38 232388 124 872 228595 0.38 229467 125 908 224552 0.40 225460 126 825 220296 0.37 221121 127 820 215224 0.38 216044 128 841 212900 0.39 213741 129 809 207623 0.39 208432 130 790 203498 0.39 204288 131 774 201409 0.38 202183 132 835 196295 0.42 197130 133 745 191739 0.39 192484 134 720 189111 0.38 189831 135 619 179404 0.34 180023 136 246 154728 0.16 154974 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 29978 6431625 0.46 6461603 2 29351 6730732 0.43 6760083 3 27624 6686185 0.41 6713809 4 28555 6570313 0.43 6598868 5 26820 6454997 0.41 6481817 6 28447 6350154 0.45 6378601 7 26860 6226983 0.43 6253843 8 26459 6223014 0.42 6249473 9 23643 6100572 0.39 6124215 10 24775 6063057 0.41 6087832 11 23515 5960553 0.39 5984068 12 24477 5867083 0.42 5891560 13 23777 5804293 0.41 5828070 14 23873 5731887 0.41 5755760 15 22397 5633205 0.40 5655602 16 22120 5522874 0.40 5544994 17 21135 5503854 0.38 5524989 18 21728 5424812 0.40 5446540 19 21821 5365107 0.41 5386928 20 21754 5273022 0.41 5294776 21 20367 5176429 0.39 5196796 22 20563 5097513 0.40 5118076 23 18559 5034908 0.37 5053467 24 19214 4969030 0.39 4988244 25 18866 4887952 0.38 4906818 26 19396 4833946 0.40 4853342 27 18783 4791125 0.39 4809908 28 18936 4699121 0.40 4718057 29 16830 4634515 0.36 4651345 30 17482 4553762 0.38 4571244 31 16527 4474665 0.37 4491192 32 17115 4432838 0.38 4449953 33 16622 4341589 0.38 4358211 34 16871 4303665 0.39 4320536 35 15587 4237811 0.37 4253398 36 15689 4173301 0.37 4188990 37 14870 4083670 0.36 4098540 38 15149 4039846 0.37 4054995 39 15007 3966977 0.38 3981984 40 15399 3905662 0.39 3921061 41 14467 3858365 0.37 3872832 42 14496 3784757 0.38 3799253 43 13748 3735058 0.37 3748806 44 13469 3700198 0.36 3713667 45 13476 3642261 0.37 3655737 46 14056 3561744 0.39 3575800 47 13438 3502696 0.38 3516134 48 13590 3429698 0.39 3443288 49 12780 3394395 0.38 3407175 50 12327 3349494 0.37 3361821 51 11523 3307728 0.35 3319251 52 12566 3252422 0.38 3264988 53 12192 3213499 0.38 3225691 54 12218 3159167 0.39 3171385 55 11548 3097515 0.37 3109063 56 11080 3058688 0.36 3069768 57 11013 3017661 0.36 3028674 58 11303 2943066 0.38 2954369 59 10883 2920309 0.37 2931192 60 11225 2860807 0.39 2872032 61 10655 2808574 0.38 2819229 62 10135 2791771 0.36 2801906 63 9970 2731309 0.36 2741279 64 10038 2687741 0.37 2697779 65 9713 2651018 0.37 2660731 66 10042 2603773 0.38 2613815 67 9966 2565501 0.39 2575467 68 9499 2533704 0.37 2543203 69 9075 2476606 0.37 2485681 70 9177 2430594 0.38 2439771 71 8752 2410514 0.36 2419266 72 8801 2365005 0.37 2373806 73 8908 2333324 0.38 2342232 74 8841 2304465 0.38 2313306 75 8325 2251880 0.37 2260205 76 8283 2221878 0.37 2230161 77 7772 2181447 0.36 2189219 78 8114 2135264 0.38 2143378 79 7994 2109328 0.38 2117322 80 7896 2074998 0.38 2082894 81 7449 2036290 0.36 2043739 82 7522 2003893 0.37 2011415 83 7157 1970345 0.36 1977502 84 7158 1937165 0.37 1944323 85 6982 1910111 0.36 1917093 86 6830 1882021 0.36 1888851 87 6965 1843741 0.38 1850706 88 6790 1806637 0.37 1813427 89 6542 1783913 0.37 1790455 90 6516 1752780 0.37 1759296 91 6243 1728721 0.36 1734964 92 6101 1703322 0.36 1709423 93 6347 1671871 0.38 1678218 94 6138 1641800 0.37 1647938 95 5893 1615610 0.36 1621503 96 5838 1588544 0.37 1594382 97 5658 1567278 0.36 1572936 98 5720 1543382 0.37 1549102 99 5613 1514430 0.37 1520043 100 5738 1493653 0.38 1499391 101 5462 1465494 0.37 1470956 102 5234 1439847 0.36 1445081 103 5055 1412842 0.36 1417897 104 5020 1389436 0.36 1394456 105 5015 1365545 0.37 1370560 106 5175 1346606 0.38 1351781 107 4954 1328374 0.37 1333328 108 4778 1300765 0.37 1305543 109 4683 1283059 0.36 1287742 110 4569 1258314 0.36 1262883 111 4475 1235563 0.36 1240038 112 4584 1214138 0.38 1218722 113 4317 1198518 0.36 1202835 114 4387 1174075 0.37 1178462 115 4239 1152593 0.37 1156832 116 4072 1139537 0.36 1143609 117 4207 1121945 0.37 1126152 118 4194 1102038 0.38 1106232 119 4023 1082124 0.37 1086147 120 4047 1058339 0.38 1062386 121 3916 1042604 0.37 1046520 122 3845 1024479 0.37 1028324 123 3768 1004793 0.37 1008561 124 3713 990385 0.37 994098 125 3640 969866 0.37 973506 126 3579 955215 0.37 958794 127 3558 935544 0.38 939102 128 3348 923108 0.36 926456 129 3548 908152 0.39 911700 130 3476 886802 0.39 890278 131 3335 871953 0.38 875288 132 3539 852633 0.41 856172 133 3452 835894 0.41 839346 134 3347 821274 0.41 824621 135 2671 798033 0.33 800704 136 1426 721260 0.20 722686