CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 297284 2034044 12.75 2331328 2 277988 1881163 12.87 2159151 3 276041 1914982 12.60 2191023 4 278387 1934793 12.58 2213180 5 283767 1926866 12.84 2210633 6 285529 1986296 12.57 2271825 7 291394 1987090 12.79 2278484 8 293554 1976014 12.93 2269568 9 292446 1976787 12.89 2269233 10 296316 1978841 13.02 2275157 11 298101 1980802 13.08 2278903 12 295995 1970131 13.06 2266126 13 294868 1954244 13.11 2249112 14 297862 1997742 12.98 2295604 15 299901 2022351 12.91 2322252 16 299330 2013958 12.94 2313288 17 300595 2028807 12.90 2329402 18 296596 2014047 12.84 2310643 19 299148 2007188 12.97 2306336 20 298212 2006907 12.94 2305119 21 297962 1996925 12.98 2294887 22 296589 1990037 12.97 2286626 23 297697 2006446 12.92 2304143 24 295459 1985489 12.95 2280948 25 296590 2021984 12.79 2318574 26 297786 2033506 12.77 2331292 27 296067 2021425 12.78 2317492 28 293849 2011133 12.75 2304982 29 292211 2007406 12.71 2299617 30 293965 1996300 12.84 2290265 31 293354 1987780 12.86 2281134 32 298902 2012117 12.93 2311019 33 295893 2010555 12.83 2306448 34 294479 1999130 12.84 2293609 35 292446 2007249 12.72 2299695 36 290497 1993843 12.72 2284340 37 289841 1999511 12.66 2289352 38 288203 1987711 12.66 2275914 39 293010 2004918 12.75 2297928 40 290759 1986635 12.77 2277394 41 292044 2005673 12.71 2297717 42 286689 1981875 12.64 2268564 43 291082 1989012 12.77 2280094 44 286471 1976852 12.66 2263323 45 282907 1976495 12.52 2259402 46 282012 1958840 12.59 2240852 47 282508 1976790 12.50 2259298 48 281525 1952594 12.60 2234119 49 284726 1959220 12.69 2243946 50 277282 1933659 12.54 2210941 51 280206 1936665 12.64 2216871 52 275335 1931997 12.47 2207332 53 272980 1934320 12.37 2207300 54 276712 1927740 12.55 2204452 55 271185 1925240 12.35 2196425 56 274011 1927978 12.44 2201989 57 273278 1921972 12.45 2195250 58 268569 1903326 12.37 2171895 59 268936 1889387 12.46 2158323 60 264390 1880814 12.32 2145204 61 266749 1889507 12.37 2156256 62 267677 1894734 12.38 2162411 63 266343 1893541 12.33 2159884 64 262658 1862503 12.36 2125161 65 260147 1871108 12.21 2131255 66 259482 1862651 12.23 2122133 67 256559 1845691 12.20 2102250 68 255470 1844294 12.17 2099764 69 255766 1835451 12.23 2091217 70 252485 1807752 12.26 2060237 71 253025 1807232 12.28 2060257 72 249467 1786925 12.25 2036392 73 251903 1786249 12.36 2038152 74 247107 1791981 12.12 2039088 75 242300 1782435 11.97 2024735 76 241509 1764003 12.04 2005512 77 239598 1761937 11.97 2001535 78 237913 1739622 12.03 1977535 79 238476 1737495 12.07 1975971 80 237483 1721116 12.13 1958599 81 233460 1708673 12.02 1942133 82 231625 1694593 12.02 1926218 83 228582 1687806 11.93 1916388 84 228351 1690305 11.90 1918656 85 228361 1679516 11.97 1907877 86 224852 1674999 11.84 1899851 87 224787 1664323 11.90 1889110 88 222214 1644450 11.90 1866664 89 219837 1638277 11.83 1858114 90 217394 1621929 11.82 1839323 91 216452 1618483 11.80 1834935 92 213537 1604553 11.75 1818090 93 213612 1590848 11.84 1804460 94 208914 1573831 11.72 1782745 95 207054 1571854 11.64 1778908 96 204774 1558842 11.61 1763616 97 206529 1547419 11.78 1753948 98 202929 1537231 11.66 1740160 99 200511 1518643 11.66 1719154 100 198845 1506475 11.66 1705320 101 196649 1503850 11.56 1700499 102 193837 1475082 11.61 1668919 103 189613 1458380 11.51 1647993 104 189420 1456914 11.51 1646334 105 187434 1443973 11.49 1631407 106 185458 1434297 11.45 1619755 107 183602 1423122 11.43 1606724 108 181170 1404585 11.42 1585755 109 181321 1399999 11.47 1581320 110 178038 1377717 11.44 1555755 111 175987 1371731 11.37 1547718 112 173562 1351835 11.38 1525397 113 171358 1339701 11.34 1511059 114 169391 1322901 11.35 1492292 115 167665 1313047 11.32 1480712 116 166352 1303223 11.32 1469575 117 164675 1291582 11.31 1456257 118 163163 1275359 11.34 1438522 119 161506 1271624 11.27 1433130 120 158041 1251822 11.21 1409863 121 156466 1237563 11.22 1394029 122 153943 1219718 11.21 1373661 123 153982 1211368 11.28 1365350 124 151329 1193702 11.25 1345031 125 149423 1184730 11.20 1334153 126 145757 1166278 11.11 1312035 127 144084 1156792 11.08 1300876 128 142740 1151296 11.03 1294036 129 141150 1133570 11.07 1274720 130 140067 1119577 11.12 1259644 131 138874 1110861 11.11 1249735 132 136155 1095249 11.06 1231404 133 134556 1088704 11.00 1223260 134 131482 1070476 10.94 1201958 135 117136 1053283 10.01 1170419 136 55433 992622 5.29 1048055 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 17091 3694473 0.46 3711564 2 15661 3152782 0.49 3168443 3 13252 3018944 0.44 3032196 4 13277 3041170 0.43 3054447 5 13080 3011224 0.43 3024304 6 13440 2966942 0.45 2980382 7 12963 3003832 0.43 3016795 8 13705 3068077 0.44 3081782 9 13012 3020033 0.43 3033045 10 13209 3087654 0.43 3100863 11 13029 3125503 0.42 3138532 12 13033 3108160 0.42 3121193 13 12598 3083540 0.41 3096138 14 13116 3088123 0.42 3101239 15 13069 3061774 0.43 3074843 16 12915 3107886 0.41 3120801 17 12897 3117687 0.41 3130584 18 12565 3092985 0.40 3105550 19 12742 3132441 0.41 3145183 20 12880 3105536 0.41 3118416 21 12721 3104466 0.41 3117187 22 12948 3120433 0.41 3133381 23 12651 3094124 0.41 3106775 24 12504 3106942 0.40 3119446 25 12471 3108709 0.40 3121180 26 13133 3135533 0.42 3148666 27 12852 3097286 0.41 3110138 28 12995 3093026 0.42 3106021 29 12792 3105482 0.41 3118274 30 12801 3073974 0.41 3086775 31 12665 3105367 0.41 3118032 32 12720 3099149 0.41 3111869 33 13051 3116696 0.42 3129747 34 13015 3105388 0.42 3118403 35 12411 3088553 0.40 3100964 36 12544 3095415 0.40 3107959 37 12703 3050203 0.41 3062906 38 12556 3087655 0.41 3100211 39 12718 3067163 0.41 3079881 40 12882 3082250 0.42 3095132 41 12571 3097012 0.40 3109583 42 12749 3099159 0.41 3111908 43 12321 3063177 0.40 3075498 44 12643 3063492 0.41 3076135 45 12811 3036130 0.42 3048941 46 12647 3030280 0.42 3042927 47 12643 3035526 0.41 3048169 48 12633 3046320 0.41 3058953 49 12285 3008281 0.41 3020566 50 12406 3048705 0.41 3061111 51 12433 2994998 0.41 3007431 52 12679 3012575 0.42 3025254 53 12470 2981452 0.42 2993922 54 12464 2984662 0.42 2997126 55 12247 2954694 0.41 2966941 56 12382 2973456 0.41 2985838 57 12465 2934189 0.42 2946654 58 12328 2944407 0.42 2956735 59 12514 2944165 0.42 2956679 60 12405 2957412 0.42 2969817 61 12210 2900801 0.42 2913011 62 12345 2932909 0.42 2945254 63 12091 2896396 0.42 2908487 64 12230 2904291 0.42 2916521 65 12187 2913548 0.42 2925735 66 12190 2882482 0.42 2894672 67 12159 2862014 0.42 2874173 68 12104 2879537 0.42 2891641 69 11916 2835953 0.42 2847869 70 12038 2838712 0.42 2850750 71 11888 2829002 0.42 2840890 72 11819 2802537 0.42 2814356 73 11864 2784899 0.42 2796763 74 11819 2775896 0.42 2787715 75 11601 2743542 0.42 2755143 76 11695 2745025 0.42 2756720 77 11645 2732310 0.42 2743955 78 11573 2718671 0.42 2730244 79 11678 2696054 0.43 2707732 80 11625 2696583 0.43 2708208 81 11555 2653426 0.43 2664981 82 11437 2653043 0.43 2664480 83 11199 2630572 0.42 2641771 84 11237 2617179 0.43 2628416 85 11237 2601712 0.43 2612949 86 11069 2607889 0.42 2618958 87 10977 2570215 0.43 2581192 88 11118 2571126 0.43 2582244 89 10864 2556701 0.42 2567565 90 11026 2539426 0.43 2550452 91 10854 2508380 0.43 2519234 92 10794 2493152 0.43 2503946 93 10721 2465898 0.43 2476619 94 10569 2461788 0.43 2472357 95 10652 2435320 0.44 2445972 96 10477 2418741 0.43 2429218 97 10408 2397621 0.43 2408029 98 10401 2401832 0.43 2412233 99 10299 2371126 0.43 2381425 100 10262 2354116 0.43 2364378 101 10327 2332355 0.44 2342682 102 10198 2307939 0.44 2318137 103 10062 2284658 0.44 2294720 104 9999 2278948 0.44 2288947 105 9912 2246607 0.44 2256519 106 9995 2233083 0.45 2243078 107 9693 2214928 0.44 2224621 108 9833 2201436 0.44 2211269 109 9779 2184399 0.45 2194178 110 9773 2177857 0.45 2187630 111 9517 2139580 0.44 2149097 112 9420 2122240 0.44 2131660 113 9409 2092118 0.45 2101527 114 9350 2075538 0.45 2084888 115 9192 2046933 0.45 2056125 116 9258 2042239 0.45 2051497 117 9247 2022239 0.46 2031486 118 9142 2003199 0.45 2012341 119 9131 1985378 0.46 1994509 120 9037 1965433 0.46 1974470 121 9063 1934969 0.47 1944032 122 8923 1924593 0.46 1933516 123 8914 1889923 0.47 1898837 124 9094 1877306 0.48 1886400 125 8886 1853131 0.48 1862017 126 8835 1831529 0.48 1840364 127 8599 1805110 0.47 1813709 128 8981 1797879 0.50 1806860 129 9053 1769761 0.51 1778814 130 9095 1756809 0.52 1765904 131 9570 1742380 0.55 1751950 132 9629 1715578 0.56 1725207 133 9491 1691033 0.56 1700524 134 8982 1678064 0.53 1687046 135 7394 1629339 0.45 1636733 136 2526 1518486 0.17 1521012 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 66979 10938881 0.61 11005860 2 73221 11603205 0.63 11676426 3 62790 11694823 0.53 11757613 4 70821 11667547 0.60 11738368 5 63956 11601077 0.55 11665033 6 75201 11569436 0.65 11644637 7 66987 11485010 0.58 11551997 8 70847 11599318 0.61 11670165 9 60695 11504173 0.52 11564868 10 67431 11554757 0.58 11622188 11 60549 11484810 0.52 11545359 12 70928 11450625 0.62 11521553 13 65253 11498789 0.56 11564042 14 71813 11520886 0.62 11592699 15 61438 11502826 0.53 11564264 16 65893 11434415 0.57 11500308 17 60412 11553013 0.52 11613425 18 68481 11543342 0.59 11611823 19 64328 11559959 0.55 11624287 20 70439 11502227 0.61 11572666 21 62436 11411408 0.54 11473844 22 66574 11374666 0.58 11441240 23 57889 11403137 0.51 11461026 24 64087 11433668 0.56 11497755 25 60127 11446536 0.52 11506663 26 68904 11489742 0.60 11558646 27 63050 11544754 0.54 11607804 28 66730 11481084 0.58 11547814 29 57853 11475526 0.50 11533379 30 62041 11424266 0.54 11486307 31 56738 11376963 0.50 11433701 32 64356 11407012 0.56 11471368 33 60562 11343922 0.53 11404484 34 66051 11419916 0.58 11485967 35 57461 11431980 0.50 11489441 36 59942 11436370 0.52 11496312 37 55407 11371917 0.48 11427324 38 60846 11398701 0.53 11459547 39 58176 11357248 0.51 11415424 40 63738 11338570 0.56 11402308 41 58336 11336355 0.51 11394691 42 60220 11265994 0.53 11326214 43 53917 11275786 0.48 11329703 44 56479 11321304 0.50 11377783 45 55390 11324423 0.49 11379813 46 62503 11267870 0.55 11330373 47 58003 11267845 0.51 11325848 48 59542 11180655 0.53 11240197 49 54320 11222447 0.48 11276767 50 54694 11216052 0.49 11270746 51 52303 11223673 0.46 11275976 52 58074 11167953 0.52 11226027 53 56366 11175437 0.50 11231803 54 59407 11161155 0.53 11220562 55 52722 11085821 0.47 11138543 56 53170 11126916 0.48 11180086 57 51188 11147031 0.46 11198219 58 55170 11049290 0.50 11104460 59 53939 11110250 0.48 11164189 60 57065 11032964 0.51 11090029 61 52568 10953724 0.48 11006292 62 52902 10986461 0.48 11039363 63 49632 10906825 0.45 10956457 64 51820 10873646 0.47 10925466 65 50286 10883304 0.46 10933590 66 55015 10880873 0.50 10935888 67 52702 10863210 0.48 10915912 68 52708 10870969 0.48 10923677 69 48364 10777793 0.45 10826157 70 49549 10696458 0.46 10746007 71 48175 10714735 0.45 10762910 72 51346 10618190 0.48 10669536 73 50492 10590430 0.47 10640922 74 51751 10580774 0.49 10632525 75 47484 10493522 0.45 10541006 76 47825 10502645 0.45 10550470 77 45458 10458967 0.43 10504425 78 48554 10380204 0.47 10428758 79 48370 10372180 0.46 10420550 80 48751 10305942 0.47 10354693 81 47063 10215626 0.46 10262689 82 46962 10161565 0.46 10208527 83 44531 10084796 0.44 10129327 84 45129 10019467 0.45 10064596 85 44658 9984903 0.45 10029561 86 46644 9973291 0.47 10019935 87 44905 9912927 0.45 9957832 88 45987 9854286 0.46 9900273 89 42924 9823286 0.44 9866210 90 43851 9745430 0.45 9789281 91 42127 9708800 0.43 9750927 92 43642 9630899 0.45 9674541 93 43555 9536121 0.45 9579676 94 44559 9458097 0.47 9502656 95 42086 9400070 0.45 9442156 96 41358 9357310 0.44 9398668 97 40004 9346046 0.43 9386050 98 41499 9319174 0.44 9360673 99 41309 9245320 0.44 9286629 100 42609 9180857 0.46 9223466 101 40825 9093496 0.45 9134321 102 39999 8991673 0.44 9031672 103 38207 8885749 0.43 8923956 104 38301 8812567 0.43 8850868 105 38059 8737548 0.43 8775607 106 39862 8713916 0.46 8753778 107 38828 8689106 0.44 8727934 108 38313 8616129 0.44 8654442 109 37608 8575454 0.44 8613062 110 36563 8485009 0.43 8521572 111 36571 8389896 0.43 8426467 112 37155 8304605 0.45 8341760 113 37130 8225509 0.45 8262639 114 37519 8139313 0.46 8176832 115 35950 8047712 0.44 8083662 116 35187 8018513 0.44 8053700 117 34632 7958779 0.43 7993411 118 35387 7898957 0.45 7934344 119 35292 7831742 0.45 7867034 120 35391 7733763 0.46 7769154 121 34873 7671617 0.45 7706490 122 34354 7580872 0.45 7615226 123 33092 7486533 0.44 7519625 124 33648 7400180 0.45 7433828 125 33343 7309809 0.45 7343152 126 33990 7245156 0.47 7279146 127 33895 7174424 0.47 7208319 128 33681 7143296 0.47 7176977 129 33337 7067837 0.47 7101174 130 33918 6974750 0.48 7008668 131 34620 6909534 0.50 6944154 132 36159 6804226 0.53 6840385 133 37608 6722417 0.56 6760025 134 37283 6657053 0.56 6694336 135 27467 6557836 0.42 6585303 136 13805 6238581 0.22 6252386 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 114683 913791 11.15 1028474 2 104962 827427 11.26 932389 3 101839 828517 10.95 930356 4 101173 820325 10.98 921498 5 102555 814387 11.18 916942 6 100820 823165 10.91 923985 7 101335 812617 11.09 913952 8 99871 795395 11.16 895266 9 99035 786767 11.18 885802 10 98439 775384 11.27 873823 11 97254 764352 11.29 861606 12 95047 745691 11.31 840738 13 93525 733159 11.31 826684 14 92268 734865 11.16 827133 15 92455 739947 11.11 832402 16 91321 725080 11.19 816401 17 89487 719236 11.07 808723 18 88152 706346 11.10 794498 19 87093 693117 11.16 780210 20 85888 680296 11.21 766184 21 84418 669718 11.19 754136 22 82891 655675 11.22 738566 23 80950 650329 11.07 731279 24 79719 636534 11.13 716253 25 78365 639371 10.92 717736 26 78541 632430 11.05 710971 27 76642 625329 10.92 701971 28 75057 612906 10.91 687963 29 73887 601280 10.94 675167 30 72694 589559 10.98 662253 31 71644 577606 11.03 649250 32 72213 577840 11.11 650053 33 70094 562855 11.07 632949 34 68422 553184 11.01 621606 35 68146 552066 10.99 620212 36 66155 538800 10.94 604955 37 65535 535818 10.90 601353 38 63994 526523 10.84 590517 39 64589 521644 11.02 586233 40 63012 511166 10.97 574178 41 62466 507725 10.96 570191 42 60215 493596 10.87 553811 43 59974 489053 10.92 549027 44 59156 477609 11.02 536765 45 56899 472305 10.75 529204 46 55828 461460 10.79 517288 47 55414 461697 10.72 517111 48 54493 450433 10.79 504926 49 54594 444782 10.93 499376 50 52491 434290 10.78 486781 51 52792 428957 10.96 481749 52 50986 421746 10.79 472732 53 49903 415254 10.73 465157 54 49476 409127 10.79 458603 55 47970 402186 10.66 450156 56 48386 397048 10.86 445434 57 46842 392579 10.66 439421 58 45573 385427 10.57 431000 59 45172 376882 10.70 422054 60 44351 371790 10.66 416141 61 43980 366882 10.70 410862 62 43497 362989 10.70 406486 63 43092 358305 10.74 401397 64 41701 348288 10.69 389989 65 40697 344474 10.57 385171 66 40009 339427 10.54 379436 67 39584 333006 10.62 372590 68 38617 328181 10.53 366798 69 38321 323666 10.59 361987 70 37397 317462 10.54 354859 71 37244 313616 10.62 350860 72 35933 305555 10.52 341488 73 36033 303173 10.62 339206 74 35378 300376 10.54 335754 75 34031 292579 10.42 326610 76 33636 287472 10.47 321108 77 33164 283595 10.47 316759 78 32569 278263 10.48 310832 79 32253 275604 10.48 307857 80 31591 269868 10.48 301459 81 30737 263840 10.43 294577 82 30228 260033 10.41 290261 83 29694 255219 10.42 284913 84 29522 254871 10.38 284393 85 29325 250748 10.47 280073 86 28412 245337 10.38 273749 87 27952 242272 10.34 270224 88 27670 238526 10.39 266196 89 27010 234273 10.34 261283 90 26358 229617 10.30 255975 91 26408 228908 10.34 255316 92 25779 223978 10.32 249757 93 25546 219356 10.43 244902 94 24475 214725 10.23 239200 95 24212 213800 10.17 238012 96 23857 209635 10.22 233492 97 23809 205546 10.38 229355 98 23302 203414 10.28 226716 99 22460 199243 10.13 221703 100 22277 195394 10.23 217671 101 21945 194499 10.14 216444 102 21335 189511 10.12 210846 103 20931 186504 10.09 207435 104 20613 183465 10.10 204078 105 20123 180586 10.03 200709 106 19971 177891 10.09 197862 107 19399 176114 9.92 195513 108 19245 171562 10.09 190807 109 19224 170613 10.13 189837 110 18568 165745 10.07 184313 111 18109 164488 9.92 182597 112 18068 160370 10.13 178438 113 17596 158122 10.01 175718 114 17440 155185 10.10 172625 115 17230 153340 10.10 170570 116 16787 150957 10.01 167744 117 16632 147429 10.14 164061 118 16041 144995 9.96 161036 119 15950 143578 10.00 159528 120 15358 140701 9.84 156059 121 15283 138097 9.96 153380 122 14915 135153 9.94 150068 123 14651 134359 9.83 149010 124 14608 131113 10.02 145721 125 13996 128947 9.79 142943 126 13666 126563 9.75 140229 127 13398 124623 9.71 138021 128 13297 123456 9.72 136753 129 13237 120532 9.90 133769 130 12630 117914 9.67 130544 131 12434 116442 9.65 128876 132 12131 113617 9.65 125748 133 11988 112563 9.62 124551 134 11347 109485 9.39 120832 135 10035 106833 8.59 116868 136 5068 92205 5.21 97273 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 8342 1672582 0.50 1680924 2 7175 1393733 0.51 1400908 3 5898 1302953 0.45 1308851 4 5836 1293900 0.45 1299736 5 5581 1267249 0.44 1272830 6 5617 1226289 0.46 1231906 7 5223 1230169 0.42 1235392 8 5384 1237246 0.43 1242630 9 5200 1201723 0.43 1206923 10 5406 1212749 0.44 1218155 11 5071 1210555 0.42 1215626 12 5162 1188185 0.43 1193347 13 4791 1160243 0.41 1165034 14 4764 1144513 0.41 1149277 15 4584 1117740 0.41 1122324 16 4578 1118072 0.41 1122650 17 4416 1108587 0.40 1113003 18 4222 1081412 0.39 1085634 19 4340 1077426 0.40 1081766 20 4295 1058958 0.40 1063253 21 4188 1044087 0.40 1048275 22 4166 1033214 0.40 1037380 23 3986 1007639 0.39 1011625 24 3913 998641 0.39 1002554 25 3890 984686 0.39 988576 26 3886 974772 0.40 978658 27 3787 951092 0.40 954879 28 3757 937810 0.40 941567 29 3560 931228 0.38 934788 30 3581 908293 0.39 911874 31 3677 904441 0.40 908118 32 3407 890605 0.38 894012 33 3393 879105 0.38 882498 34 3290 865905 0.38 869195 35 3304 848097 0.39 851401 36 3214 836559 0.38 839773 37 3095 814304 0.38 817399 38 3079 812181 0.38 815260 39 3131 797271 0.39 800402 40 3014 790414 0.38 793428 41 2860 783501 0.36 786361 42 2956 779215 0.38 782171 43 2843 753315 0.38 756158 44 2894 742983 0.39 745877 45 2735 726045 0.38 728780 46 2768 711763 0.39 714531 47 2699 702550 0.38 705249 48 2693 696350 0.39 699043 49 2535 681025 0.37 683560 50 2531 682435 0.37 684966 51 2482 662222 0.37 664704 52 2542 658179 0.38 660721 53 2419 642508 0.38 644927 54 2444 635103 0.38 637547 55 2322 618932 0.37 621254 56 2283 609500 0.37 611783 57 2314 596595 0.39 598909 58 2299 591813 0.39 594112 59 2196 582700 0.38 584896 60 2409 580789 0.41 583198 61 2102 561911 0.37 564013 62 2169 563175 0.38 565344 63 2087 548499 0.38 550586 64 2038 541405 0.38 543443 65 2139 537347 0.40 539486 66 1990 523423 0.38 525413 67 1997 514773 0.39 516770 68 1922 510152 0.38 512074 69 1811 498706 0.36 500517 70 1879 492330 0.38 494209 71 1812 486691 0.37 488503 72 1785 475795 0.37 477580 73 1750 469777 0.37 471527 74 1792 459569 0.39 461361 75 1677 449314 0.37 450991 76 1660 444910 0.37 446570 77 1680 436760 0.38 438440 78 1553 429764 0.36 431317 79 1595 421417 0.38 423012 80 1587 417935 0.38 419522 81 1513 407924 0.37 409437 82 1588 403026 0.39 404614 83 1527 396796 0.38 398323 84 1520 390917 0.39 392437 85 1484 384156 0.38 385640 86 1389 381751 0.36 383140 87 1421 371320 0.38 372741 88 1349 365649 0.37 366998 89 1349 361051 0.37 362400 90 1341 355164 0.38 356505 91 1284 347467 0.37 348751 92 1294 344465 0.37 345759 93 1333 336317 0.39 337650 94 1214 335076 0.36 336290 95 1262 327891 0.38 329153 96 1205 321784 0.37 322989 97 1220 314171 0.39 315391 98 1210 313297 0.38 314507 99 1150 306375 0.37 307525 100 1121 300865 0.37 301986 101 1152 295739 0.39 296891 102 1184 291795 0.40 292979 103 1127 286132 0.39 287259 104 1091 284301 0.38 285392 105 990 277546 0.36 278536 106 1142 273508 0.42 274650 107 1056 268082 0.39 269138 108 1021 264486 0.38 265507 109 1044 260188 0.40 261232 110 1002 255800 0.39 256802 111 979 251370 0.39 252349 112 995 248523 0.40 249518 113 974 243170 0.40 244144 114 927 240425 0.38 241352 115 924 235183 0.39 236107 116 927 232179 0.40 233106 117 856 228276 0.37 229132 118 852 224017 0.38 224869 119 828 219989 0.37 220817 120 839 216636 0.39 217475 121 825 211439 0.39 212264 122 862 209503 0.41 210365 123 846 203880 0.41 204726 124 848 202131 0.42 202979 125 855 198043 0.43 198898 126 803 195381 0.41 196184 127 801 190673 0.42 191474 128 757 187690 0.40 188447 129 765 184809 0.41 185574 130 792 179912 0.44 180704 131 744 178238 0.42 178982 132 865 173784 0.50 174649 133 727 171260 0.42 171987 134 682 168322 0.40 169004 135 558 159639 0.35 160197 136 222 138201 0.16 138423 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 29491 5270007 0.56 5299498 2 29980 5506311 0.54 5536291 3 27189 5474612 0.49 5501801 4 28489 5382533 0.53 5411022 5 26846 5280377 0.51 5307223 6 28846 5199188 0.55 5228034 7 26209 5102385 0.51 5128594 8 26102 5095899 0.51 5122001 9 23143 4995302 0.46 5018445 10 24229 4971610 0.48 4995839 11 21985 4887195 0.45 4909180 12 24486 4819176 0.51 4843662 13 23059 4767049 0.48 4790108 14 23898 4706199 0.51 4730097 15 21055 4631221 0.45 4652276 16 21101 4545629 0.46 4566730 17 19849 4533221 0.44 4553070 18 21676 4470244 0.48 4491920 19 20694 4424175 0.47 4444869 20 21591 4349945 0.49 4371536 21 19569 4278045 0.46 4297614 22 19512 4210380 0.46 4229892 23 17459 4160419 0.42 4177878 24 18329 4107655 0.44 4125984 25 17826 4052486 0.44 4070312 26 19080 4003039 0.47 4022119 27 17891 3966558 0.45 3984449 28 18456 3895177 0.47 3913633 29 16079 3843610 0.42 3859689 30 16460 3786056 0.43 3802516 31 15126 3719663 0.41 3734789 32 16598 3688961 0.45 3705559 33 15895 3615519 0.44 3631414 34 16599 3584086 0.46 3600685 35 14609 3533291 0.41 3547900 36 14856 3482301 0.42 3497157 37 13838 3414293 0.40 3428131 38 14424 3371419 0.43 3385843 39 14268 3320114 0.43 3334382 40 15191 3266767 0.46 3281958 41 13712 3232936 0.42 3246648 42 13699 3172487 0.43 3186186 43 12684 3133278 0.40 3145962 44 12948 3105746 0.42 3118694 45 12662 3062066 0.41 3074728 46 13605 2993845 0.45 3007450 47 12717 2948842 0.43 2961559 48 13214 2890094 0.46 2903308 49 11848 2860099 0.41 2871947 50 11689 2825343 0.41 2837032 51 11168 2791747 0.40 2802915 52 12048 2747460 0.44 2759508 53 11870 2718810 0.43 2730680 54 12029 2676642 0.45 2688671 55 10765 2626916 0.41 2637681 56 10559 2592398 0.41 2602957 57 10182 2558283 0.40 2568465 58 10791 2506311 0.43 2517102 59 10498 2482353 0.42 2492851 60 10852 2436814 0.44 2447666 61 10166 2394634 0.42 2404800 62 9974 2378590 0.42 2388564 63 9398 2332743 0.40 2342141 64 9680 2295952 0.42 2305632 65 9208 2265220 0.40 2274428 66 9784 2232702 0.44 2242486 67 9199 2199568 0.42 2208767 68 9150 2171496 0.42 2180646 69 8605 2124547 0.40 2133152 70 8637 2090439 0.41 2099076 71 8552 2071696 0.41 2080248 72 8667 2034356 0.42 2043023 73 8507 2005761 0.42 2014268 74 8610 1984550 0.43 1993160 75 7910 1943853 0.41 1951763 76 7843 1918966 0.41 1926809 77 7262 1887509 0.38 1894771 78 7796 1846674 0.42 1854470 79 7652 1827628 0.42 1835280 80 7658 1799426 0.42 1807084 81 7111 1767303 0.40 1774414 82 7169 1744153 0.41 1751322 83 6704 1711251 0.39 1717955 84 6847 1685468 0.40 1692315 85 6779 1662989 0.41 1669768 86 6602 1640987 0.40 1647589 87 6599 1608841 0.41 1615440 88 6569 1578792 0.41 1585361 89 6273 1559541 0.40 1565814 90 6194 1535291 0.40 1541485 91 5917 1515128 0.39 1521045 92 5923 1495044 0.39 1500967 93 6089 1464654 0.41 1470743 94 6046 1438530 0.42 1444576 95 5772 1420392 0.40 1426164 96 5562 1395514 0.40 1401076 97 5392 1379564 0.39 1384956 98 5381 1359397 0.39 1364778 99 5319 1335988 0.40 1341307 100 5553 1318737 0.42 1324290 101 5314 1297605 0.41 1302919 102 5151 1271414 0.40 1276565 103 4820 1250944 0.38 1255764 104 4865 1228152 0.39 1233017 105 4826 1209342 0.40 1214168 106 4846 1195357 0.40 1200203 107 4708 1179492 0.40 1184200 108 4714 1158322 0.41 1163036 109 4684 1144918 0.41 1149602 110 4363 1122060 0.39 1126423 111 4372 1099846 0.40 1104218 112 4434 1082685 0.41 1087119 113 4148 1069205 0.39 1073353 114 4372 1052251 0.41 1056623 115 4118 1029872 0.40 1033990 116 3975 1017506 0.39 1021481 117 3958 1003472 0.39 1007430 118 3992 987959 0.40 991951 119 3862 970320 0.40 974182 120 3894 950969 0.41 954863 121 3913 937738 0.42 941651 122 3714 919221 0.40 922935 123 3763 904640 0.41 908403 124 3578 889332 0.40 892910 125 3595 872902 0.41 876497 126 3607 860235 0.42 863842 127 3512 845600 0.41 849112 128 3544 835968 0.42 839512 129 3440 821817 0.42 825257 130 3415 802213 0.42 805628 131 3284 789636 0.41 792920 132 3478 771350 0.45 774828 133 3400 760147 0.45 763547 134 3192 745474 0.43 748666 135 2614 725336 0.36 727950 136 1405 651081 0.22 652486