CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 364311 2372545 13.31 2736856 2 343487 2194976 13.53 2538463 3 342622 2230990 13.31 2573612 4 346947 2257692 13.32 2604639 5 351436 2233414 13.60 2584850 6 354670 2304438 13.34 2659108 7 361314 2304155 13.56 2665469 8 361793 2293211 13.63 2655004 9 362850 2298951 13.63 2661801 10 365422 2297915 13.72 2663337 11 367958 2301844 13.78 2669802 12 366298 2285741 13.81 2652039 13 364159 2270025 13.82 2634184 14 370118 2320448 13.76 2690566 15 373738 2345170 13.75 2718908 16 371940 2331171 13.76 2703111 17 372316 2347438 13.69 2719754 18 368353 2331997 13.64 2700350 19 372695 2326131 13.81 2698826 20 369769 2327476 13.71 2697245 21 370214 2318627 13.77 2688841 22 369065 2309642 13.78 2678707 23 368934 2330407 13.67 2699341 24 367469 2309180 13.73 2676649 25 368227 2340554 13.59 2708781 26 368576 2363302 13.49 2731878 27 370916 2343488 13.66 2714404 28 365433 2338622 13.51 2704055 29 366561 2330873 13.59 2697434 30 365678 2319136 13.62 2684814 31 364399 2309404 13.63 2673803 32 372365 2347418 13.69 2719783 33 368331 2340709 13.60 2709040 34 366396 2326580 13.61 2692976 35 365487 2338404 13.52 2703891 36 361870 2319913 13.49 2681783 37 362493 2327016 13.48 2689509 38 360040 2319889 13.43 2679929 39 364567 2338181 13.49 2702748 40 365594 2312548 13.65 2678142 41 369003 2346426 13.59 2715429 42 357821 2318592 13.37 2676413 43 366914 2325546 13.63 2692460 44 362133 2313931 13.53 2676064 45 358003 2313597 13.40 2671600 46 356153 2297483 13.42 2653636 47 354922 2318593 13.28 2673515 48 354634 2287959 13.42 2642593 49 360398 2297115 13.56 2657513 50 353426 2267576 13.48 2621002 51 355150 2281924 13.47 2637074 52 350122 2283623 13.29 2633745 53 347220 2283616 13.20 2630836 54 349844 2278232 13.31 2628076 55 345643 2271735 13.21 2617378 56 350061 2278036 13.32 2628097 57 350018 2272024 13.35 2622042 58 345298 2253827 13.29 2599125 59 343763 2235645 13.33 2579408 60 340334 2228047 13.25 2568381 61 343501 2239461 13.30 2582962 62 345280 2254968 13.28 2600248 63 344989 2256719 13.26 2601708 64 341646 2221569 13.33 2563215 65 340283 2231058 13.23 2571341 66 340412 2218406 13.30 2558818 67 334007 2201021 13.18 2535028 68 333478 2204680 13.14 2538158 69 335328 2194989 13.25 2530317 70 329549 2162166 13.23 2491715 71 331104 2170851 13.23 2501955 72 325420 2148776 13.15 2474196 73 328491 2148510 13.26 2477001 74 326222 2156656 13.14 2482878 75 320016 2146297 12.98 2466313 76 318960 2131657 13.02 2450617 77 316241 2126162 12.95 2442403 78 316367 2108339 13.05 2424706 79 315258 2100582 13.05 2415840 80 314785 2085071 13.12 2399856 81 308470 2072849 12.95 2381319 82 305091 2058358 12.91 2363449 83 303379 2056306 12.86 2359685 84 302622 2056977 12.83 2359599 85 303726 2051821 12.89 2355547 86 301916 2047429 12.85 2349345 87 301483 2034706 12.90 2336189 88 298578 2011332 12.93 2309910 89 293176 2004546 12.76 2297722 90 291772 1987222 12.80 2278994 91 291478 1988060 12.79 2279538 92 287776 1970510 12.74 2258286 93 288257 1957341 12.84 2245598 94 281905 1938458 12.70 2220363 95 282486 1937332 12.73 2219818 96 278441 1923108 12.65 2201549 97 277407 1909289 12.69 2186696 98 274336 1901305 12.61 2175641 99 272242 1879128 12.65 2151370 100 271018 1860668 12.71 2131686 101 269179 1860308 12.64 2129487 102 262834 1826880 12.58 2089714 103 258429 1809446 12.50 2067875 104 259563 1806284 12.56 2065847 105 256388 1795434 12.50 2051822 106 252257 1779678 12.41 2031935 107 251454 1773138 12.42 2024592 108 248411 1745851 12.46 1994262 109 248224 1740665 12.48 1988889 110 244255 1717765 12.45 1962020 111 241084 1706039 12.38 1947123 112 238450 1682843 12.41 1921293 113 234867 1670865 12.32 1905732 114 231840 1647242 12.34 1879082 115 229418 1637254 12.29 1866672 116 227662 1623014 12.30 1850676 117 225367 1611478 12.27 1836845 118 223284 1590018 12.31 1813302 119 222333 1583468 12.31 1805801 120 218460 1554693 12.32 1773153 121 216367 1541337 12.31 1757704 122 213351 1521661 12.30 1735012 123 209325 1507874 12.19 1717199 124 207680 1486756 12.26 1694436 125 203380 1477949 12.10 1681329 126 198776 1452697 12.04 1651473 127 197762 1437678 12.09 1635440 128 194353 1431268 11.96 1625621 129 193744 1410617 12.08 1604361 130 190923 1390885 12.07 1581808 131 189186 1378263 12.07 1567449 132 186790 1358736 12.09 1545526 133 184526 1347858 12.04 1532384 134 179164 1328104 11.89 1507268 135 159465 1303037 10.90 1462502 136 76026 1227948 5.83 1303974 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 18671 4319160 0.43 4337831 2 16280 3686926 0.44 3703206 3 14361 3533322 0.40 3547683 4 14334 3558238 0.40 3572572 5 13959 3517946 0.40 3531905 6 14388 3459538 0.41 3473926 7 13907 3499958 0.40 3513865 8 14613 3582206 0.41 3596819 9 13851 3524470 0.39 3538321 10 14113 3607593 0.39 3621706 11 14145 3644353 0.39 3658498 12 14074 3629855 0.39 3643929 13 13706 3589969 0.38 3603675 14 13804 3605264 0.38 3619068 15 13548 3572533 0.38 3586081 16 13879 3616800 0.38 3630679 17 13560 3640309 0.37 3653869 18 13524 3603604 0.37 3617128 19 13569 3649186 0.37 3662755 20 13577 3621857 0.37 3635434 21 14007 3618738 0.39 3632745 22 13662 3631001 0.37 3644663 23 13483 3608681 0.37 3622164 24 13731 3622443 0.38 3636174 25 13741 3625445 0.38 3639186 26 13690 3654614 0.37 3668304 27 13835 3608746 0.38 3622581 28 13663 3605209 0.38 3618872 29 13365 3615530 0.37 3628895 30 13693 3585391 0.38 3599084 31 13654 3622607 0.38 3636261 32 13408 3620545 0.37 3633953 33 13839 3632998 0.38 3646837 34 13615 3626866 0.37 3640481 35 13396 3603007 0.37 3616403 36 13441 3611919 0.37 3625360 37 13200 3562673 0.37 3575873 38 13369 3609185 0.37 3622554 39 13595 3585098 0.38 3598693 40 13385 3602264 0.37 3615649 41 13416 3622896 0.37 3636312 42 13580 3635374 0.37 3648954 43 13250 3587687 0.37 3600937 44 13446 3599951 0.37 3613397 45 13593 3561268 0.38 3574861 46 13433 3555182 0.38 3568615 47 13483 3561518 0.38 3575001 48 13195 3570802 0.37 3583997 49 13291 3532873 0.37 3546164 50 13605 3593975 0.38 3607580 51 13215 3528191 0.37 3541406 52 13693 3554990 0.38 3568683 53 13202 3526703 0.37 3539905 54 13465 3523018 0.38 3536483 55 13176 3489166 0.38 3502342 56 13383 3517937 0.38 3531320 57 13241 3469300 0.38 3482541 58 13074 3482487 0.37 3495561 59 13327 3489767 0.38 3503094 60 13233 3509455 0.38 3522688 61 12988 3447155 0.38 3460143 62 13254 3487084 0.38 3500338 63 13197 3447439 0.38 3460636 64 13149 3460572 0.38 3473721 65 13416 3471853 0.38 3485269 66 13184 3442134 0.38 3455318 67 13370 3417099 0.39 3430469 68 13390 3449916 0.39 3463306 69 13041 3402242 0.38 3415283 70 12939 3400185 0.38 3413124 71 13208 3395455 0.39 3408663 72 12754 3363526 0.38 3376280 73 12787 3356429 0.38 3369216 74 13037 3345986 0.39 3359023 75 12768 3307164 0.38 3319932 76 12910 3315710 0.39 3328620 77 12865 3298444 0.39 3311309 78 12830 3289386 0.39 3302216 79 12701 3267084 0.39 3279785 80 12915 3269588 0.39 3282503 81 12609 3218687 0.39 3231296 82 12531 3221593 0.39 3234124 83 12591 3204395 0.39 3216986 84 12365 3196341 0.39 3208706 85 12567 3174038 0.39 3186605 86 12556 3183016 0.39 3195572 87 12363 3140952 0.39 3153315 88 12231 3131241 0.39 3143472 89 12439 3132569 0.40 3145008 90 12329 3108628 0.40 3120957 91 12324 3078911 0.40 3091235 92 11865 3066916 0.39 3078781 93 11996 3033675 0.39 3045671 94 11812 3030287 0.39 3042099 95 11699 2998585 0.39 3010284 96 11809 2987808 0.39 2999617 97 11767 2959695 0.40 2971462 98 11861 2967730 0.40 2979591 99 11662 2933522 0.40 2945184 100 11472 2911260 0.39 2922732 101 11640 2888431 0.40 2900071 102 11576 2864510 0.40 2876086 103 11516 2828928 0.41 2840444 104 11414 2832989 0.40 2844403 105 11196 2789493 0.40 2800689 106 11243 2777475 0.40 2788718 107 11200 2757727 0.40 2768927 108 11206 2740735 0.41 2751941 109 11080 2719052 0.41 2730132 110 11024 2713015 0.40 2724039 111 10885 2666001 0.41 2676886 112 11022 2646694 0.41 2657716 113 10751 2604186 0.41 2614937 114 10711 2586040 0.41 2596751 115 10873 2549196 0.42 2560069 116 10615 2546711 0.42 2557326 117 10646 2520201 0.42 2530847 118 10609 2498633 0.42 2509242 119 10365 2472481 0.42 2482846 120 10651 2456728 0.43 2467379 121 10560 2406261 0.44 2416821 122 10378 2402298 0.43 2412676 123 10232 2355173 0.43 2365405 124 10467 2341873 0.44 2352340 125 10131 2308840 0.44 2318971 126 10187 2276512 0.45 2286699 127 10083 2245116 0.45 2255199 128 10267 2230075 0.46 2240342 129 10408 2201695 0.47 2212103 130 10854 2181993 0.49 2192847 131 11144 2166865 0.51 2178009 132 11312 2133378 0.53 2144690 133 11008 2097141 0.52 2108149 134 10517 2079295 0.50 2089812 135 8773 2019974 0.43 2028747 136 3045 1876667 0.16 1879712 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 64953 12604733 0.51 12669686 2 70531 13390429 0.52 13460960 3 62893 13488731 0.46 13551624 4 68899 13469817 0.51 13538716 5 63299 13398407 0.47 13461706 6 70554 13354045 0.53 13424599 7 62962 13268625 0.47 13331587 8 67753 13392803 0.50 13460556 9 59791 13275402 0.45 13335193 10 65733 13313932 0.49 13379665 11 59817 13253494 0.45 13313311 12 66346 13207841 0.50 13274187 13 61872 13249619 0.46 13311491 14 66533 13309804 0.50 13376337 15 59729 13269292 0.45 13329021 16 63728 13190678 0.48 13254406 17 59409 13332504 0.44 13391913 18 64361 13299096 0.48 13363457 19 61573 13319349 0.46 13380922 20 64760 13262589 0.49 13327349 21 59490 13161177 0.45 13220667 22 63447 13114810 0.48 13178257 23 57070 13150426 0.43 13207496 24 62696 13179926 0.47 13242622 25 58539 13203890 0.44 13262429 26 63500 13249583 0.48 13313083 27 59968 13321518 0.45 13381486 28 62794 13230846 0.47 13293640 29 56289 13235998 0.42 13292287 30 61256 13165897 0.46 13227153 31 56235 13105529 0.43 13161764 32 60977 13150188 0.46 13211165 33 57792 13071150 0.44 13128942 34 62210 13164189 0.47 13226399 35 56091 13191884 0.42 13247975 36 59263 13195530 0.45 13254793 37 54493 13114472 0.41 13168965 38 59225 13165567 0.45 13224792 39 56549 13124420 0.43 13180969 40 59982 13082801 0.46 13142783 41 56636 13089863 0.43 13146499 42 58363 13015768 0.45 13074131 43 54840 13012147 0.42 13066987 44 57275 13078391 0.44 13135666 45 54377 13087140 0.41 13141517 46 59628 13019211 0.46 13078839 47 55588 13039766 0.42 13095354 48 57649 12946557 0.44 13004206 49 54259 13011475 0.42 13065734 50 55920 13009796 0.43 13065716 51 52599 13013445 0.40 13066044 52 57944 12945866 0.45 13003810 53 54796 12961066 0.42 13015862 54 57679 12945794 0.44 13003473 55 52983 12872587 0.41 12925570 56 54052 12943029 0.42 12997081 57 52819 12973466 0.41 13026285 58 55417 12863568 0.43 12918985 59 52848 12941472 0.41 12994320 60 56233 12859576 0.44 12915809 61 52177 12779226 0.41 12831403 62 53509 12841626 0.41 12895135 63 51358 12741615 0.40 12792973 64 52802 12721099 0.41 12773901 65 51404 12739191 0.40 12790595 66 54011 12737856 0.42 12791867 67 52101 12715956 0.41 12768057 68 52649 12743742 0.41 12796391 69 49870 12641333 0.39 12691203 70 52002 12564327 0.41 12616329 71 50283 12612198 0.40 12662481 72 51879 12509352 0.41 12561231 73 50272 12490251 0.40 12540523 74 52061 12490690 0.42 12542751 75 48997 12382945 0.39 12431942 76 50635 12401842 0.41 12452477 77 48017 12360721 0.39 12408738 78 50115 12276828 0.41 12326943 79 49428 12288093 0.40 12337521 80 50167 12228856 0.41 12279023 81 47683 12135843 0.39 12183526 82 49485 12069170 0.41 12118655 83 46940 12007410 0.39 12054350 84 47806 11929690 0.40 11977496 85 47357 11888115 0.40 11935472 86 48251 11886801 0.40 11935052 87 46751 11818418 0.39 11865169 88 48049 11750235 0.41 11798284 89 45442 11733293 0.39 11778735 90 47215 11651499 0.40 11698714 91 44739 11630194 0.38 11674933 92 46232 11549316 0.40 11595548 93 45433 11427949 0.40 11473382 94 46684 11343178 0.41 11389862 95 44058 11287852 0.39 11331910 96 45128 11228048 0.40 11273176 97 43472 11225493 0.39 11268965 98 44687 11200280 0.40 11244967 99 43976 11125488 0.39 11169464 100 45224 11066234 0.41 11111458 101 43375 10952678 0.39 10996053 102 43718 10836988 0.40 10880706 103 41374 10722608 0.38 10763982 104 42111 10646283 0.39 10688394 105 41259 10548231 0.39 10589490 106 42095 10515147 0.40 10557242 107 41216 10487775 0.39 10528991 108 41619 10399958 0.40 10441577 109 40691 10347459 0.39 10388150 110 40793 10255682 0.40 10296475 111 39799 10143517 0.39 10183316 112 40670 10038101 0.40 10078771 113 39406 9955125 0.39 9994531 114 40156 9838865 0.41 9879021 115 38728 9721777 0.40 9760505 116 38596 9696782 0.40 9735378 117 37858 9634198 0.39 9672056 118 38792 9549851 0.40 9588643 119 38477 9476713 0.40 9515190 120 39042 9349572 0.42 9388614 121 37871 9264279 0.41 9302150 122 37713 9163601 0.41 9201314 123 36938 9040766 0.41 9077704 124 37783 8933590 0.42 8971373 125 36668 8824077 0.41 8860745 126 37318 8734352 0.43 8771670 127 36560 8652542 0.42 8689102 128 37148 8610919 0.43 8648067 129 37184 8505895 0.44 8543079 130 38028 8393793 0.45 8431821 131 38723 8310705 0.46 8349428 132 40044 8184856 0.49 8224900 133 41282 8077097 0.51 8118379 134 41291 7990637 0.51 8031928 135 31319 7849795 0.40 7881114 136 15392 7465257 0.21 7480649 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 150325 1111657 11.91 1261982 2 138054 1008749 12.04 1146803 3 135565 1002045 11.92 1137610 4 134030 995722 11.86 1129752 5 135042 982146 12.09 1117188 6 132565 990550 11.80 1123115 7 133793 978142 12.03 1111935 8 131008 957184 12.04 1088192 9 130485 946228 12.12 1076713 10 128374 928422 12.15 1056796 11 127831 916387 12.24 1044218 12 124365 895862 12.19 1020227 13 122220 873907 12.27 996127 14 121229 877597 12.14 998826 15 120368 877100 12.07 997468 16 118241 859059 12.10 977300 17 117122 852930 12.07 970052 18 113600 835847 11.96 949447 19 112685 819030 12.09 931715 20 110671 807106 12.06 917777 21 108353 788326 12.08 896679 22 105495 773398 12.00 878893 23 104119 762738 12.01 866857 24 102288 745804 12.06 848092 25 99810 742816 11.85 842626 26 99094 740347 11.80 839441 27 98681 724088 11.99 822769 28 95406 712613 11.81 808019 29 93386 694880 11.85 788266 30 93161 683448 12.00 776609 31 89894 666264 11.89 756158 32 90786 666657 11.99 757443 33 88277 650083 11.96 738360 34 86016 635668 11.92 721684 35 85050 631236 11.87 716286 36 81874 616266 11.73 698140 37 81385 609368 11.78 690753 38 78970 598873 11.65 677843 39 79435 593768 11.80 673203 40 78189 578952 11.90 657141 41 77534 577669 11.83 655203 42 74302 559332 11.73 633634 43 74467 553571 11.86 628038 44 71983 537562 11.81 609545 45 70505 531171 11.72 601676 46 68309 518886 11.63 587195 47 67345 516117 11.54 583462 48 66792 501191 11.76 567983 49 65603 496898 11.66 562501 50 63457 480667 11.66 544124 51 63019 477390 11.66 540409 52 61244 469987 11.53 531231 53 60090 459068 11.57 519158 54 58973 451610 11.55 510583 55 57174 441795 11.46 498969 56 57651 436719 11.66 494370 57 56274 429477 11.58 485751 58 55180 419963 11.61 475143 59 53182 411275 11.45 464457 60 52351 401853 11.53 454204 61 52383 397852 11.63 450235 62 51632 395148 11.56 446780 63 50832 388274 11.58 439106 64 49079 374952 11.57 424031 65 47888 372272 11.40 420160 66 47406 363015 11.55 410421 67 45940 354336 11.48 400276 68 44774 351109 11.31 395883 69 44758 345671 11.46 390429 70 43556 335459 11.49 379015 71 43635 333990 11.56 377625 72 41975 324136 11.47 366111 73 42083 319296 11.65 361379 74 40554 315459 11.39 356013 75 39545 308842 11.35 348387 76 38049 301487 11.21 339536 77 37580 296716 11.24 334296 78 36814 290180 11.26 326994 79 36762 287335 11.34 324097 80 36191 280855 11.42 317046 81 34370 274367 11.13 308737 82 34293 269427 11.29 303720 83 33615 265320 11.24 298935 84 32711 261340 11.12 294051 85 32683 257591 11.26 290274 86 32197 252453 11.31 284650 87 31602 246986 11.34 278588 88 30610 242124 11.22 272734 89 29730 236735 11.16 266465 90 29348 233317 11.17 262665 91 28793 231344 11.07 260137 92 28352 226623 11.12 254975 93 28262 222534 11.27 250796 94 26770 218014 10.94 244784 95 26830 214599 11.11 241429 96 26011 209793 11.03 235804 97 25735 204641 11.17 230376 98 24968 201987 11.00 226955 99 24486 197272 11.04 221758 100 23927 194163 10.97 218090 101 23395 192829 10.82 216224 102 22768 185950 10.91 208718 103 22344 183509 10.85 205853 104 22177 180530 10.94 202707 105 21656 177348 10.88 199004 106 21272 174229 10.88 195501 107 20934 171304 10.89 192238 108 20602 167260 10.97 187862 109 19976 165396 10.78 185372 110 19623 160333 10.90 179956 111 19057 158590 10.73 177647 112 18761 155129 10.79 173890 113 18547 151836 10.89 170383 114 18128 148900 10.85 167028 115 17717 147311 10.74 165028 116 17198 144502 10.64 161700 117 16983 140901 10.76 157884 118 16588 137977 10.73 154565 119 16827 136114 11.00 152941 120 15947 132058 10.77 148005 121 15773 130625 10.77 146398 122 15205 126842 10.70 142047 123 14985 126090 10.62 141075 124 14603 123183 10.60 137786 125 14050 121331 10.38 135381 126 13906 118262 10.52 132168 127 13697 115325 10.62 129022 128 13325 114443 10.43 127768 129 13201 111330 10.60 124531 130 12566 109286 10.31 121852 131 12645 106839 10.58 119484 132 12247 104775 10.47 117022 133 12013 103198 10.43 115211 134 11544 100321 10.32 111865 135 10347 97352 9.61 107699 136 5004 84309 5.60 89313 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 9265 2025802 0.46 2035067 2 7814 1690089 0.46 1697903 3 6578 1584500 0.41 1591078 4 6466 1566420 0.41 1572886 5 6111 1525023 0.40 1531134 6 6082 1475989 0.41 1482071 7 6008 1476571 0.41 1482579 8 5992 1487361 0.40 1493353 9 5738 1442824 0.40 1448562 10 5993 1456336 0.41 1462329 11 5696 1451132 0.39 1456828 12 5590 1422123 0.39 1427713 13 5224 1381477 0.38 1386701 14 5084 1360581 0.37 1365665 15 5096 1324895 0.38 1329991 16 4957 1322169 0.37 1327126 17 4840 1311028 0.37 1315868 18 4738 1276763 0.37 1281501 19 4712 1273090 0.37 1277802 20 4650 1246865 0.37 1251515 21 4535 1226632 0.37 1231167 22 4371 1211590 0.36 1215961 23 4327 1181287 0.36 1185614 24 4212 1164732 0.36 1168944 25 4247 1149987 0.37 1154234 26 4122 1133292 0.36 1137414 27 4067 1101150 0.37 1105217 28 3908 1083797 0.36 1087705 29 3823 1074790 0.35 1078613 30 3692 1047824 0.35 1051516 31 3721 1042246 0.36 1045967 32 3614 1023232 0.35 1026846 33 3682 1007828 0.36 1011510 34 3606 994273 0.36 997879 35 3503 964510 0.36 968013 36 3341 951011 0.35 954352 37 3192 925680 0.34 928872 38 3124 921350 0.34 924474 39 3224 901320 0.36 904544 40 3098 892565 0.35 895663 41 3170 882928 0.36 886098 42 3005 875865 0.34 878870 43 2992 846321 0.35 849313 44 2873 835417 0.34 838290 45 2882 812633 0.35 815515 46 2839 793646 0.36 796485 47 2744 781722 0.35 784466 48 2757 771576 0.36 774333 49 2696 753537 0.36 756233 50 2683 756835 0.35 759518 51 2566 731062 0.35 733628 52 2498 724791 0.34 727289 53 2447 707114 0.34 709561 54 2401 695529 0.34 697930 55 2418 675755 0.36 678173 56 2315 668413 0.35 670728 57 2245 647462 0.35 649707 58 2230 643446 0.35 645676 59 2148 631092 0.34 633240 60 2156 626017 0.34 628173 61 2128 605068 0.35 607196 62 2035 604490 0.34 606525 63 2032 589623 0.34 591655 64 1984 582041 0.34 584025 65 2018 573857 0.35 575875 66 1946 560128 0.35 562074 67 1901 547240 0.35 549141 68 1831 542443 0.34 544274 69 1798 527929 0.34 529727 70 1784 521871 0.34 523655 71 1832 512774 0.36 514606 72 1735 499464 0.35 501199 73 1699 494043 0.34 495742 74 1700 483145 0.35 484845 75 1646 470059 0.35 471705 76 1693 465869 0.36 467562 77 1553 454325 0.34 455878 78 1569 446238 0.35 447807 79 1554 437076 0.35 438630 80 1538 431494 0.36 433032 81 1446 419723 0.34 421169 82 1399 413342 0.34 414741 83 1464 407762 0.36 409226 84 1456 401481 0.36 402937 85 1347 392934 0.34 394281 86 1324 388956 0.34 390280 87 1411 375877 0.37 377288 88 1274 369970 0.34 371244 89 1311 363598 0.36 364909 90 1301 357797 0.36 359098 91 1267 350757 0.36 352024 92 1232 346209 0.35 347441 93 1179 337602 0.35 338781 94 1111 334914 0.33 336025 95 1130 326937 0.34 328067 96 1143 320664 0.36 321807 97 1121 312688 0.36 313809 98 1079 309150 0.35 310229 99 1083 301962 0.36 303045 100 1125 298593 0.38 299718 101 978 291907 0.33 292885 102 1051 287765 0.36 288816 103 941 281810 0.33 282751 104 1022 278664 0.37 279686 105 1041 272116 0.38 273157 106 975 266803 0.36 267778 107 924 261104 0.35 262028 108 913 256315 0.35 257228 109 890 250675 0.35 251565 110 872 247720 0.35 248592 111 825 240980 0.34 241805 112 909 238392 0.38 239301 113 869 233253 0.37 234122 114 937 229928 0.41 230865 115 810 223121 0.36 223931 116 840 221042 0.38 221882 117 842 217218 0.39 218060 118 796 212015 0.37 212811 119 736 207153 0.35 207889 120 785 204301 0.38 205086 121 742 198559 0.37 199301 122 787 196685 0.40 197472 123 711 190849 0.37 191560 124 740 189374 0.39 190114 125 760 185328 0.41 186088 126 703 181476 0.39 182179 127 712 175956 0.40 176668 128 673 173544 0.39 174217 129 700 170102 0.41 170802 130 641 166560 0.38 167201 131 681 163734 0.41 164415 132 689 160546 0.43 161235 133 595 155958 0.38 156553 134 558 153678 0.36 154236 135 513 145059 0.35 145572 136 201 125188 0.16 125389 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 30593 6221613 0.49 6252206 2 30965 6496133 0.47 6527098 3 28930 6448163 0.45 6477093 4 29507 6344012 0.46 6373519 5 27749 6211218 0.44 6238967 6 28233 6096901 0.46 6125134 7 26041 5984112 0.43 6010153 8 26300 5964658 0.44 5990958 9 23808 5839754 0.41 5863562 10 24540 5791942 0.42 5816482 11 22934 5689260 0.40 5712194 12 23782 5590584 0.42 5614366 13 22675 5522349 0.41 5545024 14 23011 5454063 0.42 5477074 15 21434 5348949 0.40 5370383 16 21777 5240473 0.41 5262250 17 20486 5218979 0.39 5239465 18 20983 5133223 0.41 5154206 19 20469 5065361 0.40 5085830 20 20617 4978095 0.41 4998712 21 19288 4870875 0.39 4890163 22 19404 4795350 0.40 4814754 23 17711 4721863 0.37 4739574 24 18284 4663649 0.39 4681933 25 17768 4581669 0.39 4599437 26 18213 4519494 0.40 4537707 27 17151 4476077 0.38 4493228 28 17355 4384108 0.39 4401463 29 15848 4311039 0.37 4326887 30 16264 4234801 0.38 4251065 31 15498 4154067 0.37 4169565 32 15672 4106435 0.38 4122107 33 15257 4022159 0.38 4037416 34 15522 3981218 0.39 3996740 35 14506 3916137 0.37 3930643 36 14705 3854722 0.38 3869427 37 13896 3761002 0.37 3774898 38 14181 3711839 0.38 3726020 39 13681 3641810 0.37 3655491 40 14044 3575094 0.39 3589138 41 13208 3530988 0.37 3544196 42 13238 3457755 0.38 3470993 43 12472 3405842 0.36 3418314 44 12689 3371399 0.37 3384088 45 11975 3315452 0.36 3327427 46 12821 3237825 0.39 3250646 47 11819 3179963 0.37 3191782 48 11933 3102932 0.38 3114865 49 11168 3070834 0.36 3082002 50 11430 3028124 0.38 3039554 51 10641 2985195 0.36 2995836 52 11425 2927277 0.39 2938702 53 10706 2890701 0.37 2901407 54 10922 2833509 0.38 2844431 55 10311 2779463 0.37 2789774 56 10100 2738095 0.37 2748195 57 9808 2702594 0.36 2712402 58 10232 2632141 0.39 2642373 59 9560 2605177 0.37 2614737 60 9876 2549501 0.39 2559377 61 9299 2499139 0.37 2508438 62 9101 2477096 0.37 2486197 63 9008 2420760 0.37 2429768 64 9018 2380543 0.38 2389561 65 8645 2345827 0.37 2354472 66 8900 2304786 0.38 2313686 67 8507 2263103 0.37 2271610 68 8337 2229750 0.37 2238087 69 7772 2175632 0.36 2183404 70 8008 2131612 0.37 2139620 71 7624 2114099 0.36 2121723 72 7985 2069097 0.38 2077082 73 7683 2037883 0.38 2045566 74 7764 2012008 0.38 2019772 75 7118 1964196 0.36 1971314 76 7235 1933372 0.37 1940607 77 6731 1895155 0.35 1901886 78 6958 1852293 0.37 1859251 79 6907 1829287 0.38 1836194 80 6851 1795145 0.38 1801996 81 6372 1759784 0.36 1766156 82 6625 1725459 0.38 1732084 83 6196 1699011 0.36 1705207 84 6094 1666204 0.36 1672298 85 6122 1639406 0.37 1645528 86 5911 1615855 0.36 1621766 87 5979 1580874 0.38 1586853 88 5844 1547354 0.38 1553198 89 5534 1521145 0.36 1526679 90 5805 1493655 0.39 1499460 91 5488 1473381 0.37 1478869 92 5454 1449317 0.37 1454771 93 5496 1419110 0.39 1424606 94 5434 1389577 0.39 1395011 95 4968 1367762 0.36 1372730 96 5168 1341795 0.38 1346963 97 4906 1321641 0.37 1326547 98 4951 1301460 0.38 1306411 99 4719 1273775 0.37 1278494 100 4822 1258381 0.38 1263203 101 4715 1229700 0.38 1234415 102 4535 1204857 0.37 1209392 103 4392 1182416 0.37 1186808 104 4233 1161631 0.36 1165864 105 4177 1139363 0.37 1143540 106 4383 1122158 0.39 1126541 107 4203 1102220 0.38 1106423 108 4159 1082472 0.38 1086631 109 4060 1066767 0.38 1070827 110 3916 1044606 0.37 1048522 111 3726 1020171 0.36 1023897 112 3858 1002365 0.38 1006223 113 3722 987222 0.38 990944 114 3757 967238 0.39 970995 115 3595 945227 0.38 948822 116 3336 933077 0.36 936413 117 3511 920163 0.38 923674 118 3435 903063 0.38 906498 119 3323 884883 0.37 888206 120 3329 863838 0.38 867167 121 3262 848890 0.38 852152 122 3236 831017 0.39 834253 123 3155 815995 0.39 819150 124 3204 801034 0.40 804238 125 3114 783062 0.40 786176 126 3127 770582 0.40 773709 127 3090 755645 0.41 758735 128 2843 745001 0.38 747844 129 2918 730930 0.40 733848 130 2794 712743 0.39 715537 131 2832 699715 0.40 702547 132 2944 679617 0.43 682561 133 2917 667237 0.44 670154 134 2736 653149 0.42 655885 135 2221 635573 0.35 637794 136 1213 571642 0.21 572855