Module	Section	Sample Name	Source
Bismark	alignment	2_CGATGT_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/2_CGATGT_L001_R1_001_trimmed_bismark_bt2_SE_report.txt
Bismark	alignment	4_TGACCA_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/4_TGACCA_L001_R1_001_trimmed_bismark_bt2_SE_report.txt
Bismark	alignment	1_ATCACG_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/1_ATCACG_L001_R1_001_trimmed_bismark_bt2_SE_report.txt
Bismark	alignment	5_ACAGTG_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/5_ACAGTG_L001_R1_001_trimmed_bismark_bt2_SE_report.txt
Bismark	alignment	6_GCCAAT_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/6_GCCAAT_L001_R1_001_trimmed_bismark_bt2_SE_report.txt
Bismark	alignment	8_ACTTGA_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/8_ACTTGA_L001_R1_001_trimmed_bismark_bt2_SE_report.txt
Bismark	alignment	7_CAGATC_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/7_CAGATC_L001_R1_001_trimmed_bismark_bt2_SE_report.txt
Bismark	alignment	3_TTAGGC_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/3_TTAGGC_L001_R1_001_trimmed_bismark_bt2_SE_report.txt
Bismark	deduplication	4_TGACCA_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/4_TGACCA_L001_R1_001_trimmed_bismark_bt2.deduplication_report.txt
Bismark	deduplication	2_CGATGT_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/2_CGATGT_L001_R1_001_trimmed_bismark_bt2.deduplication_report.txt
Bismark	deduplication	5_ACAGTG_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/5_ACAGTG_L001_R1_001_trimmed_bismark_bt2.deduplication_report.txt
Bismark	deduplication	6_GCCAAT_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/6_GCCAAT_L001_R1_001_trimmed_bismark_bt2.deduplication_report.txt
Bismark	deduplication	3_TTAGGC_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/3_TTAGGC_L001_R1_001_trimmed_bismark_bt2.deduplication_report.txt
Bismark	deduplication	7_CAGATC_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/7_CAGATC_L001_R1_001_trimmed_bismark_bt2.deduplication_report.txt
Bismark	deduplication	1_ATCACG_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/1_ATCACG_L001_R1_001_trimmed_bismark_bt2.deduplication_report.txt
Bismark	deduplication	8_ACTTGA_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/8_ACTTGA_L001_R1_001_trimmed_bismark_bt2.deduplication_report.txt
Bismark	methylation_extraction	1_ATCACG_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/1_ATCACG_L001_R1_001_trimmed_bismark_bt2.deduplicated_splitting_report.txt
Bismark	methylation_extraction	6_GCCAAT_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/6_GCCAAT_L001_R1_001_trimmed_bismark_bt2.deduplicated_splitting_report.txt
Bismark	methylation_extraction	5_ACAGTG_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/5_ACAGTG_L001_R1_001_trimmed_bismark_bt2.deduplicated_splitting_report.txt
Bismark	methylation_extraction	3_TTAGGC_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/3_TTAGGC_L001_R1_001_trimmed_bismark_bt2.deduplicated_splitting_report.txt
Bismark	methylation_extraction	7_CAGATC_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/7_CAGATC_L001_R1_001_trimmed_bismark_bt2.deduplicated_splitting_report.txt
Bismark	methylation_extraction	4_TGACCA_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/4_TGACCA_L001_R1_001_trimmed_bismark_bt2.deduplicated_splitting_report.txt
Bismark	methylation_extraction	8_ACTTGA_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/8_ACTTGA_L001_R1_001_trimmed_bismark_bt2.deduplicated_splitting_report.txt
Bismark	methylation_extraction	2_CGATGT_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/2_CGATGT_L001_R1_001_trimmed_bismark_bt2.deduplicated_splitting_report.txt
Bismark	m_bias	6_GCCAAT_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/6_GCCAAT_L001_R1_001_trimmed_bismark_bt2.deduplicated.M-bias.txt
Bismark	m_bias	7_CAGATC_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/7_CAGATC_L001_R1_001_trimmed_bismark_bt2.deduplicated.M-bias.txt
Bismark	m_bias	4_TGACCA_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/4_TGACCA_L001_R1_001_trimmed_bismark_bt2.deduplicated.M-bias.txt
Bismark	m_bias	2_CGATGT_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/2_CGATGT_L001_R1_001_trimmed_bismark_bt2.deduplicated.M-bias.txt
Bismark	m_bias	8_ACTTGA_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/8_ACTTGA_L001_R1_001_trimmed_bismark_bt2.deduplicated.M-bias.txt
Bismark	m_bias	3_TTAGGC_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/3_TTAGGC_L001_R1_001_trimmed_bismark_bt2.deduplicated.M-bias.txt
Bismark	m_bias	5_ACAGTG_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/5_ACAGTG_L001_R1_001_trimmed_bismark_bt2.deduplicated.M-bias.txt
Bismark	m_bias	1_ATCACG_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/1_ATCACG_L001_R1_001_trimmed_bismark_bt2.deduplicated.M-bias.txt
FastQC	all_sections	1_ATCACG_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/1_ATCACG_L001_R1_001_trimmed_fastqc.zip
FastQC	all_sections	7_CAGATC_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/7_CAGATC_L001_R1_001_trimmed_fastqc.zip
FastQC	all_sections	combined	/gscratch/scrubbed/sr320/070221-olydir/combined_fastqc.zip
FastQC	all_sections	6_GCCAAT_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/6_GCCAAT_L001_R1_001_trimmed_fastqc.zip
FastQC	all_sections	5_ACAGTG_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/5_ACAGTG_L001_R1_001_trimmed_fastqc.zip
FastQC	all_sections	8_ACTTGA_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/8_ACTTGA_L001_R1_001_trimmed_fastqc.zip
FastQC	all_sections	2_CGATGT_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/2_CGATGT_L001_R1_001_trimmed_fastqc.zip
FastQC	all_sections	3_TTAGGC_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/3_TTAGGC_L001_R1_001_trimmed_fastqc.zip
FastQC	all_sections	4_TGACCA_L001_R1_001	/gscratch/scrubbed/sr320/070221-olydir/4_TGACCA_L001_R1_001_trimmed_fastqc.zip