8_ACTTGA_L001_R1_001_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: single-end (SAM format) Output specified: comprehensive Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 5214639 lines in total Total number of methylation call strings processed: 5214639 Final Cytosine Methylation Report ================================= Total number of C's analysed: 28169285 Total methylated C's in CpG context: 966984 Total methylated C's in CHG context: 60729 Total methylated C's in CHH context: 288912 Total C to T conversions in CpG context: 3106620 Total C to T conversions in CHG context: 5461621 Total C to T conversions in CHH context: 18284419 C methylated in CpG context: 23.7% C methylated in non-CpG context: 1.5%