Total number of alignments analysed in 3_TTAGGC_L001_R1_001_trimmed_bismark_bt2.bam: 5086098 Total number duplicated alignments removed: 728408 (14.32%) Duplicated alignments were found at: 371562 different position(s) Total count of deduplicated leftover sequences: 4357690 (85.68% of total)