EPI-230_S37_L004_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 39562 lines in total Total number of methylation call strings processed: 79124 Final Cytosine Methylation Report ================================= Total number of C's analysed: 768627 Total methylated C's in CpG context: 30278 Total methylated C's in CHG context: 3899 Total methylated C's in CHH context: 27831 Total C to T conversions in CpG context: 77318 Total C to T conversions in CHG context: 154341 Total C to T conversions in CHH context: 474960 C methylated in CpG context: 28.1% C methylated in CHG context: 2.5% C methylated in CHH context: 5.5%