EPI-229_S36_L004_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 41917 lines in total Total number of methylation call strings processed: 83834 Final Cytosine Methylation Report ================================= Total number of C's analysed: 848876 Total methylated C's in CpG context: 33476 Total methylated C's in CHG context: 4476 Total methylated C's in CHH context: 31843 Total C to T conversions in CpG context: 86323 Total C to T conversions in CHG context: 174013 Total C to T conversions in CHH context: 518745 C methylated in CpG context: 27.9% C methylated in CHG context: 2.5% C methylated in CHH context: 5.8%