EPI-227_S35_L004_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 44661 lines in total Total number of methylation call strings processed: 89322 Final Cytosine Methylation Report ================================= Total number of C's analysed: 921294 Total methylated C's in CpG context: 37684 Total methylated C's in CHG context: 4996 Total methylated C's in CHH context: 32844 Total C to T conversions in CpG context: 87669 Total C to T conversions in CHG context: 185674 Total C to T conversions in CHH context: 572427 C methylated in CpG context: 30.1% C methylated in CHG context: 2.6% C methylated in CHH context: 5.4%