EPI-226_S34_L004_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 43302 lines in total Total number of methylation call strings processed: 86604 Final Cytosine Methylation Report ================================= Total number of C's analysed: 954226 Total methylated C's in CpG context: 39634 Total methylated C's in CHG context: 5205 Total methylated C's in CHH context: 35796 Total C to T conversions in CpG context: 90112 Total C to T conversions in CHG context: 192276 Total C to T conversions in CHH context: 591203 C methylated in CpG context: 30.5% C methylated in CHG context: 2.6% C methylated in CHH context: 5.7%