EPI-221_S33_L004_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 43957 lines in total Total number of methylation call strings processed: 87914 Final Cytosine Methylation Report ================================= Total number of C's analysed: 860811 Total methylated C's in CpG context: 35075 Total methylated C's in CHG context: 4962 Total methylated C's in CHH context: 31137 Total C to T conversions in CpG context: 82766 Total C to T conversions in CHG context: 174351 Total C to T conversions in CHH context: 532520 C methylated in CpG context: 29.8% C methylated in CHG context: 2.8% C methylated in CHH context: 5.5%