EPI-215_S31_L004_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 43486 lines in total Total number of methylation call strings processed: 86972 Final Cytosine Methylation Report ================================= Total number of C's analysed: 867038 Total methylated C's in CpG context: 38078 Total methylated C's in CHG context: 4987 Total methylated C's in CHH context: 32749 Total C to T conversions in CpG context: 81199 Total C to T conversions in CHG context: 175121 Total C to T conversions in CHH context: 534904 C methylated in CpG context: 31.9% C methylated in CHG context: 2.8% C methylated in CHH context: 5.8%