EPI-205_S26_L004_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 39958 lines in total Total number of methylation call strings processed: 79916 Final Cytosine Methylation Report ================================= Total number of C's analysed: 726538 Total methylated C's in CpG context: 30348 Total methylated C's in CHG context: 4210 Total methylated C's in CHH context: 30809 Total C to T conversions in CpG context: 73360 Total C to T conversions in CHG context: 146243 Total C to T conversions in CHH context: 441568 C methylated in CpG context: 29.3% C methylated in CHG context: 2.8% C methylated in CHH context: 6.5%