EPI-199_S24_L003_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 41233 lines in total Total number of methylation call strings processed: 82466 Final Cytosine Methylation Report ================================= Total number of C's analysed: 834824 Total methylated C's in CpG context: 35595 Total methylated C's in CHG context: 4728 Total methylated C's in CHH context: 36683 Total C to T conversions in CpG context: 79123 Total C to T conversions in CHG context: 168056 Total C to T conversions in CHH context: 510639 C methylated in CpG context: 31.0% C methylated in CHG context: 2.7% C methylated in CHH context: 6.7%