EPI-194_S23_L003_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 43422 lines in total Total number of methylation call strings processed: 86844 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1007153 Total methylated C's in CpG context: 41954 Total methylated C's in CHG context: 5079 Total methylated C's in CHH context: 33953 Total C to T conversions in CpG context: 94694 Total C to T conversions in CHG context: 203641 Total C to T conversions in CHH context: 627832 C methylated in CpG context: 30.7% C methylated in CHG context: 2.4% C methylated in CHH context: 5.1%