EPI-185_S19_L003_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 39426 lines in total Total number of methylation call strings processed: 78852 Final Cytosine Methylation Report ================================= Total number of C's analysed: 840006 Total methylated C's in CpG context: 30783 Total methylated C's in CHG context: 4583 Total methylated C's in CHH context: 35259 Total C to T conversions in CpG context: 86530 Total C to T conversions in CHG context: 172943 Total C to T conversions in CHH context: 509908 C methylated in CpG context: 26.2% C methylated in CHG context: 2.6% C methylated in CHH context: 6.5%