EPI-184_S18_L003_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 42466 lines in total Total number of methylation call strings processed: 84932 Final Cytosine Methylation Report ================================= Total number of C's analysed: 885195 Total methylated C's in CpG context: 33703 Total methylated C's in CHG context: 4467 Total methylated C's in CHH context: 29980 Total C to T conversions in CpG context: 87429 Total C to T conversions in CHG context: 180954 Total C to T conversions in CHH context: 548662 C methylated in CpG context: 27.8% C methylated in CHG context: 2.4% C methylated in CHH context: 5.2%