EPI-182_S17_L003_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 42517 lines in total Total number of methylation call strings processed: 85034 Final Cytosine Methylation Report ================================= Total number of C's analysed: 945146 Total methylated C's in CpG context: 34060 Total methylated C's in CHG context: 4816 Total methylated C's in CHH context: 27476 Total C to T conversions in CpG context: 92382 Total C to T conversions in CHG context: 189472 Total C to T conversions in CHH context: 596940 C methylated in CpG context: 26.9% C methylated in CHG context: 2.5% C methylated in CHH context: 4.4%