EPI-176_S15_L003_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 38642 lines in total Total number of methylation call strings processed: 77284 Final Cytosine Methylation Report ================================= Total number of C's analysed: 835606 Total methylated C's in CpG context: 30417 Total methylated C's in CHG context: 3877 Total methylated C's in CHH context: 21243 Total C to T conversions in CpG context: 87902 Total C to T conversions in CHG context: 167201 Total C to T conversions in CHH context: 524966 C methylated in CpG context: 25.7% C methylated in CHG context: 2.3% C methylated in CHH context: 3.9%