EPI-169_S12_L002_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 41120 lines in total Total number of methylation call strings processed: 82240 Final Cytosine Methylation Report ================================= Total number of C's analysed: 818462 Total methylated C's in CpG context: 31357 Total methylated C's in CHG context: 4529 Total methylated C's in CHH context: 34479 Total C to T conversions in CpG context: 81829 Total C to T conversions in CHG context: 166275 Total C to T conversions in CHH context: 499993 C methylated in CpG context: 27.7% C methylated in CHG context: 2.7% C methylated in CHH context: 6.5%