EPI-154_S5_L002_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 38638 lines in total Total number of methylation call strings processed: 77276 Final Cytosine Methylation Report ================================= Total number of C's analysed: 834770 Total methylated C's in CpG context: 32364 Total methylated C's in CHG context: 4071 Total methylated C's in CHH context: 30236 Total C to T conversions in CpG context: 79787 Total C to T conversions in CHG context: 167697 Total C to T conversions in CHH context: 520615 C methylated in CpG context: 28.9% C methylated in CHG context: 2.4% C methylated in CHH context: 5.5%