EPI-153_S4_L002_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 41270 lines in total Total number of methylation call strings processed: 82540 Final Cytosine Methylation Report ================================= Total number of C's analysed: 860072 Total methylated C's in CpG context: 32719 Total methylated C's in CHG context: 4647 Total methylated C's in CHH context: 35144 Total C to T conversions in CpG context: 86229 Total C to T conversions in CHG context: 174657 Total C to T conversions in CHH context: 526676 C methylated in CpG context: 27.5% C methylated in CHG context: 2.6% C methylated in CHH context: 6.3%