EPI-143_S37_L005_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 44232 lines in total Total number of methylation call strings processed: 88464 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1018718 Total methylated C's in CpG context: 37279 Total methylated C's in CHG context: 5086 Total methylated C's in CHH context: 23614 Total C to T conversions in CpG context: 101164 Total C to T conversions in CHG context: 201873 Total C to T conversions in CHH context: 649702 C methylated in CpG context: 26.9% C methylated in CHG context: 2.5% C methylated in CHH context: 3.5%