EPI-136_S36_L005_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0_dev Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 44649 lines in total Total number of methylation call strings processed: 89298 Final Cytosine Methylation Report ================================= Total number of C's analysed: 967354 Total methylated C's in CpG context: 32988 Total methylated C's in CHG context: 5004 Total methylated C's in CHH context: 22312 Total C to T conversions in CpG context: 100225 Total C to T conversions in CHG context: 192272 Total C to T conversions in CHH context: 614553 C methylated in CpG context: 24.8% C methylated in CHG context: 2.5% C methylated in CHH context: 3.5%