zr1394_8_s456_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 16682 lines in total Total number of methylation call strings processed: 16682 Final Cytosine Methylation Report ================================= Total number of C's analysed: 127461 Total methylated C's in CpG context: 5382 Total methylated C's in CHG context: 2475 Total methylated C's in CHH context: 27803 Total C to T conversions in CpG context: 7089 Total C to T conversions in CHG context: 10749 Total C to T conversions in CHH context: 73963 C methylated in CpG context: 43.2% C methylated in CHG context: 18.7% C methylated in CHH context: 27.3%