zr1394_12_s456_trimmed_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 24805 lines in total Total number of methylation call strings processed: 24805 Final Cytosine Methylation Report ================================= Total number of C's analysed: 184349 Total methylated C's in CpG context: 6654 Total methylated C's in CHG context: 3105 Total methylated C's in CHH context: 39493 Total C to T conversions in CpG context: 11236 Total C to T conversions in CHG context: 15761 Total C to T conversions in CHH context: 108100 C methylated in CpG context: 37.2% C methylated in CHG context: 16.5% C methylated in CHH context: 26.8%