combined_bismark_bt2.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.22.3
Bismark result file: single-end (SAM format)
Output specified: comprehensive
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 28573677 lines in total
Total number of methylation call strings processed: 28573677

Final Cytosine Methylation Report
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Total number of C's analysed:	154138678

Total methylated C's in CpG context:	5284600
Total methylated C's in CHG context:	343750
Total methylated C's in CHH context:	1627489

Total C to T conversions in CpG context:	16537973
Total C to T conversions in CHG context:	29141338
Total C to T conversions in CHH context:	101203528

C methylated in CpG context:	24.2%
C methylated in non-CpG context:	1.5%