zr3534_9_R1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.22.3
Bismark result file: paired-end (SAM format)
Output specified: strand-specific (default)
No overlapping methylation calls specified


Processed 55727 lines in total
Total number of methylation call strings processed: 111454

Final Cytosine Methylation Report
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Total number of C's analysed:	1352824

Total methylated C's in CpG context:	17147
Total methylated C's in CHG context:	1109
Total methylated C's in CHH context:	4655

Total C to T conversions in CpG context:	158036
Total C to T conversions in CHG context:	235705
Total C to T conversions in CHH context:	936172

C methylated in CpG context:	9.8%
C methylated in CHG context:	0.5%
C methylated in CHH context:	0.5%