zr3644_22_R1.fastp_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 57790 lines in total Total number of methylation call strings processed: 115580 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1400184 Total methylated C's in CpG context: 17967 Total methylated C's in CHG context: 1195 Total methylated C's in CHH context: 4901 Total C to T conversions in CpG context: 162565 Total C to T conversions in CHG context: 241491 Total C to T conversions in CHH context: 972065 C methylated in CpG context: 10.0% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%