zr3644_16_R1.fastp_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 57429 lines in total Total number of methylation call strings processed: 114858 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1314284 Total methylated C's in CpG context: 17404 Total methylated C's in CHG context: 1122 Total methylated C's in CHH context: 4762 Total C to T conversions in CpG context: 152417 Total C to T conversions in CHG context: 227151 Total C to T conversions in CHH context: 911428 C methylated in CpG context: 10.2% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%