zr3644_14_R1.fastp_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.22.3 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 58034 lines in total Total number of methylation call strings processed: 116068 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1392769 Total methylated C's in CpG context: 20439 Total methylated C's in CHG context: 1189 Total methylated C's in CHH context: 4943 Total C to T conversions in CpG context: 156912 Total C to T conversions in CHG context: 238595 Total C to T conversions in CHH context: 970691 C methylated in CpG context: 11.5% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%