Meth5_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 634647 lines in total Total number of methylation call strings processed: 1269294 Final Cytosine Methylation Report ================================= Total number of C's analysed: 18069913 Total methylated C's in CpG context: 112000 Total methylated C's in CHG context: 23202 Total methylated C's in CHH context: 84450 Total C to T conversions in CpG context: 3742742 Total C to T conversions in CHG context: 3557409 Total C to T conversions in CHH context: 10550110 C methylated in CpG context: 2.9% C methylated in CHG context: 0.6% C methylated in CHH context: 0.8%