Meth2_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: strand-specific (default)
No overlapping methylation calls specified


Processed 378680 lines in total
Total number of methylation call strings processed: 757360

Final Cytosine Methylation Report
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Total number of C's analysed:	10140118

Total methylated C's in CpG context:	81507
Total methylated C's in CHG context:	22860
Total methylated C's in CHH context:	88321

Total C to T conversions in CpG context:	1473531
Total C to T conversions in CHG context:	1818575
Total C to T conversions in CHH context:	6655324

C methylated in CpG context:	5.2%
C methylated in CHG context:	1.2%
C methylated in CHH context:	1.3%